Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:59 (578237): wrapper (7.7.26015): starting
09:35:59 (578237): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 09:35:59] Arguments: --nthreads 4
[2026-03-09 09:35:59] Threads: 4
[2026-03-09 09:35:59] Checking for CVMFS
[2026-03-09 09:35:59] No cvmfs_config command found, will try listing directly
[2026-03-09 09:35:59] CVMFS is ok
[2026-03-09 09:35:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 09:35:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 09:35:59] Further information can be found at the LHC@home message board.
[2026-03-09 09:35:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 09:35:59] Checking for apptainer binary...
[2026-03-09 09:35:59] which: no apptainer in ((null))
[2026-03-09 09:35:59] apptainer is not installed, using version from CVMFS
[2026-03-09 09:35:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 09:36:00] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-09 09:36:00] apptainer works
[2026-03-09 09:36:00] Set ATHENA_PROC_NUMBER=4
[2026-03-09 09:36:00] Set ATHENA_CORE_NUMBER=4
[2026-03-09 09:36:00] Starting ATLAS job with PandaID=7044426967
[2026-03-09 09:36:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 13:16:43]  *** The last 200 lines of the pilot log: ***
[2026-03-09 13:16:43] 2026-03-09 12:15:51,791 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_38291/.job.ad'
[2026-03-09 13:16:43] 2026-03-09 12:15:51,791 | INFO     | total number of processed events: 400 (read)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,802 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7044426967/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,803 | INFO     | extracted standard info from prmon json
[2026-03-09 13:16:43] 2026-03-09 12:15:51,803 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 13:16:43] 2026-03-09 12:15:51,803 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 13:16:43] 2026-03-09 12:15:51,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 13:16:43] 2026-03-09 12:15:51,804 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 13:16:43] 2026-03-09 12:15:51,807 | INFO     | fitting pss+swap vs Time
[2026-03-09 13:16:43] 2026-03-09 12:15:51,808 | INFO     | sum of square deviations: 3124858590.0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,809 | INFO     | sum of deviations: -1637426080.499998
[2026-03-09 13:16:43] 2026-03-09 12:15:51,809 | INFO     | mean x: 1773051956.5
[2026-03-09 13:16:43] 2026-03-09 12:15:51,809 | INFO     | mean y: 2338697.662037037
[2026-03-09 13:16:43] 2026-03-09 12:15:51,810 | INFO     | intersect: 931418024.6259648
[2026-03-09 13:16:43] 2026-03-09 12:15:51,810 | INFO     | chi2: 2.1384467977301025
[2026-03-09 13:16:43] 2026-03-09 12:15:51,810 | INFO     | sum of square deviations: 2912836010.0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,812 | INFO     | sum of deviations: 11912548662.999998
[2026-03-09 13:16:43] 2026-03-09 12:15:51,812 | INFO     | mean x: 1773051804.0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,812 | INFO     | mean y: 2348259.478672986
[2026-03-09 13:16:43] 2026-03-09 12:15:51,812 | INFO     | intersect: -7248854974.983516
[2026-03-09 13:16:43] 2026-03-09 12:15:51,812 | INFO     | chi2: 1.3410454667390928
[2026-03-09 13:16:43] 2026-03-09 12:15:51,812 | INFO     | current chi2=1.3410454667390928 (change=37.28880848648784 %)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,813 | INFO     | sum of square deviations: 2710627567.5
[2026-03-09 13:16:43] 2026-03-09 12:15:51,814 | INFO     | sum of deviations: 11572462560.999996
[2026-03-09 13:16:43] 2026-03-09 12:15:51,814 | INFO     | mean x: 1773051651.5
[2026-03-09 13:16:43] 2026-03-09 12:15:51,814 | INFO     | mean y: 2348002.932038835
[2026-03-09 13:16:43] 2026-03-09 12:15:51,814 | INFO     | intersect: -7567328518.371533
[2026-03-09 13:16:43] 2026-03-09 12:15:51,815 | INFO     | chi2: 1.3416521065981595
[2026-03-09 13:16:43] 2026-03-09 12:15:51,815 | INFO     | current chi2=1.3416521065981595 (change=-0.04523633792535324 %)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,815 | INFO     | right removable region: 205
[2026-03-09 13:16:43] 2026-03-09 12:15:51,815 | INFO     | sum of square deviations: 2912836010.0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,816 | INFO     | sum of deviations: -29194937208.00001
[2026-03-09 13:16:43] 2026-03-09 12:15:51,816 | INFO     | mean x: 1773052109.0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,817 | INFO     | mean y: 2358287.1611374407
[2026-03-09 13:16:43] 2026-03-09 12:15:51,817 | INFO     | intersect: 17773405064.61669
[2026-03-09 13:16:43] 2026-03-09 12:15:51,817 | INFO     | chi2: 0.8529308913463645
[2026-03-09 13:16:43] 2026-03-09 12:15:51,817 | INFO     | current chi2=0.8529308913463645 (change=60.11446755412736 %)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,817 | INFO     | sum of square deviations: 2710627567.5
[2026-03-09 13:16:43] 2026-03-09 12:15:51,819 | INFO     | sum of deviations: -28238881981.5
[2026-03-09 13:16:43] 2026-03-09 12:15:51,819 | INFO     | mean x: 1773052261.5
[2026-03-09 13:16:43] 2026-03-09 12:15:51,819 | INFO     | mean y: 2357550.927184466
[2026-03-09 13:16:43] 2026-03-09 12:15:51,819 | INFO     | intersect: 18473730807.751476
[2026-03-09 13:16:43] 2026-03-09 12:15:51,819 | INFO     | chi2: 0.8502730695864067
[2026-03-09 13:16:43] 2026-03-09 12:15:51,819 | INFO     | current chi2=0.8502730695864067 (change=0.3116104466286074 %)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,819 | INFO     | left removable region: 20
[2026-03-09 13:16:43] 2026-03-09 12:15:51,820 | INFO     | sum of square deviations: 1963274020.0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,821 | INFO     | sum of deviations: -9364195338.999994
[2026-03-09 13:16:43] 2026-03-09 12:15:51,821 | INFO     | mean x: 1773052231.0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,821 | INFO     | mean y: 2363773.745945946
[2026-03-09 13:16:43] 2026-03-09 12:15:51,821 | INFO     | intersect: 8459261419.309321
[2026-03-09 13:16:43] 2026-03-09 12:15:51,821 | INFO     | chi2: 0.026746451094452246
[2026-03-09 13:16:43] 2026-03-09 12:15:51,822 | INFO     | current memory leak: -4.77 B/s (using 185 data points, chi2=0.03)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,822 | INFO     | could have reported an average CPU frequency of 2523 MHz (11 samples)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,822 | INFO     | ..............................
[2026-03-09 13:16:43] 2026-03-09 12:15:51,822 | INFO     | . Timing measurements:
[2026-03-09 13:16:43] 2026-03-09 12:15:51,822 | INFO     | . get job = 0 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,823 | INFO     | . initial setup = 6 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,823 | INFO     | . payload setup = 6 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,823 | INFO     | . stage-in = 0 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,823 | INFO     | . payload execution = 13149 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,823 | INFO     | . stage-out = 1 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,823 | INFO     | . log creation = 0 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,823 | INFO     | ..............................
[2026-03-09 13:16:43] 2026-03-09 12:15:51,911 | INFO     | 
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | job summary report
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | --------------------------------------------------
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | PanDA job id: 7044426967
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | task id: 48958554
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | errors: (none)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | pilot state: finished 
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | transexitcode: 0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | exeerrorcode: 0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,912 | INFO     | exeerrordiag: 
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | exitcode: 0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | exitmsg: OK
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | cpuconsumptiontime: 50332 s
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | nevents: 400
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | neventsw: 0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | pid: 587235
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | pgrp: 587235
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | corecount: 4
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | event service: False
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | sizes: {0: 2279749, 1: 2280210, 11: 2280210, 13159: 2310250, 13162: 2319270, 13165: 2319648}
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | --------------------------------------------------
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | 
[2026-03-09 13:16:43] 2026-03-09 12:15:51,913 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-03-09 13:16:43] 2026-03-09 12:15:51,936 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,936 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,936 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,936 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,937 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,938 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,938 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 13:16:43] 2026-03-09 12:15:51,938 | INFO     | job 7044426967 has completed (purged errors)
[2026-03-09 13:16:43] 2026-03-09 12:15:51,938 | INFO     | overall cleanup function is called
[2026-03-09 13:16:43] 2026-03-09 12:15:52,586 | INFO     | PID=582395 has CPU usage=11.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 13:16:43] 2026-03-09 12:15:52,586 | INFO     | .. there are 12 such processes running
[2026-03-09 13:16:43] 2026-03-09 12:15:52,946 | INFO     | --- collectZombieJob: --- 10, [587235]
[2026-03-09 13:16:43] 2026-03-09 12:15:52,946 | INFO     | zombie collector waiting for pid 587235
[2026-03-09 13:16:43] 2026-03-09 12:15:52,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 13:16:43] 2026-03-09 12:15:52,946 | INFO     | collected zombie processes
[2026-03-09 13:16:43] 2026-03-09 12:15:52,946 | INFO     | will attempt to kill all subprocesses of pid=587235
[2026-03-09 13:16:43] 2026-03-09 12:15:53,286 | INFO     | process IDs to be killed: [587235] (in reverse order)
[2026-03-09 13:16:43] 2026-03-09 12:15:53,398 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 13:16:43] 2026-03-09 12:15:53,399 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 13:16:43] 2026-03-09 12:15:53,410 | INFO     | did not find any defunct processes belonging to 587235
[2026-03-09 13:16:43] 2026-03-09 12:15:53,420 | INFO     | did not find any defunct processes belonging to 587235
[2026-03-09 13:16:43] 2026-03-09 12:15:53,420 | INFO     | ready for new job
[2026-03-09 13:16:43] 2026-03-09 12:15:53,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 13:16:43] 2026-03-09 12:15:53,423 | INFO     | **************************************
[2026-03-09 13:16:43] 2026-03-09 12:15:53,423 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 13:16:43] 2026-03-09 12:15:53,423 | INFO     | **************************************
[2026-03-09 13:16:43] 2026-03-09 12:15:53,423 | INFO     | 
[2026-03-09 13:16:43] 2026-03-09 12:15:53,427 | INFO     | architecture information:
[2026-03-09 13:16:43] 2026-03-09 12:15:53,427 | INFO     | executing command: cat /etc/os-release
[2026-03-09 13:16:43] 2026-03-09 12:15:53,441 | INFO     | cat /etc/os-release:
[2026-03-09 13:16:43] NAME="CentOS Linux"
[2026-03-09 13:16:43] VERSION="7 (Core)"
[2026-03-09 13:16:43] ID="centos"
[2026-03-09 13:16:43] ID_LIKE="rhel fedora"
[2026-03-09 13:16:43] VERSION_ID="7"
[2026-03-09 13:16:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 13:16:43] ANSI_COLOR="0;31"
[2026-03-09 13:16:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 13:16:43] HOME_URL="https://www.centos.org/"
[2026-03-09 13:16:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 13:16:43] 
[2026-03-09 13:16:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 13:16:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 13:16:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 13:16:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 13:16:43] 
[2026-03-09 13:16:43] 2026-03-09 12:15:53,442 | INFO     | **************************************
[2026-03-09 13:16:43] 2026-03-09 12:15:53,945 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-03-09 13:16:43] 2026-03-09 12:15:53,961 | INFO     | sufficient remaining disk space (20059258880 B)
[2026-03-09 13:16:43] 2026-03-09 12:15:53,962 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 13:16:43] 2026-03-09 12:15:53,963 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 13:16:43] 2026-03-09 12:15:53,963 | INFO     | update_server=False
[2026-03-09 13:16:43] 2026-03-09 12:15:53,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 13:16:43] 2026-03-09 12:15:53,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 13:16:43] 2026-03-09 12:15:54,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 13:16:43] 2026-03-09 12:15:54,403 | INFO     | all job control threads have been joined
[2026-03-09 13:16:43] 2026-03-09 12:15:54,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:16:43] 2026-03-09 12:15:54,768 | INFO     | aborting loop
[2026-03-09 13:16:43] 2026-03-09 12:15:54,916 | INFO     | all data control threads have been joined
[2026-03-09 13:16:43] 2026-03-09 12:15:54,968 | INFO     | [job] retrieve thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:54,974 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,008 | INFO     | all payload control threads have been joined
[2026-03-09 13:16:43] 2026-03-09 12:15:55,083 | INFO     | [data] copytool_in thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,142 | INFO     | [job] validate thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,280 | INFO     | [payload] validate_post thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,409 | INFO     | [job] control thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,490 | INFO     | [payload] failed_post thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,586 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,773 | INFO     | [job] job monitor thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,922 | INFO     | [data] control thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:55,929 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:56,013 | INFO     | [payload] control thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:56,207 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:56,290 | INFO     | [data] copytool_out thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:56,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 13:16:43] 2026-03-09 12:15:57,928 | INFO     | [job] queue monitor thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:15:57,965 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 13:16:43] 2026-03-09 12:16:24,992 | INFO     | PID=582395 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-09 13:16:43] 2026-03-09 12:16:24,992 | INFO     | .. there are 12 such processes running
[2026-03-09 13:16:43] 2026-03-09 12:16:24,993 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 13:16:43] 2026-03-09 12:16:24,993 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 13:16:43] 2026-03-09 12:16:24,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 13:16:43] 2026-03-09 12:16:37,392 | INFO     | [monitor] cgroup control has ended
[2026-03-09 13:16:43] 2026-03-09 12:16:38,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22842460510016)>', '<ExcThread(monitor, started 22842220750592)>']
[2026-03-09 13:16:43] 2026-03-09 12:16:39,054 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 13:16:43] 2026-03-09 12:16:39,055 | INFO     | [monitor] control thread has ended
[2026-03-09 13:16:43] 2026-03-09 12:16:43,389 | INFO     | all workflow threads have been joined
[2026-03-09 13:16:43] 2026-03-09 12:16:43,390 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 13:16:43] 2026-03-09 12:16:43,391 | INFO     | traces error code: 0
[2026-03-09 13:16:43] 2026-03-09 12:16:43,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 13:16:43] 2026-03-09 12:16:43,556 [wrapper] ==== pilot stdout END ====
[2026-03-09 13:16:43] 2026-03-09 12:16:43,559 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 13:16:43] 2026-03-09 12:16:43,562 [wrapper] pilotpid: 582395
[2026-03-09 13:16:43] 2026-03-09 12:16:43,564 [wrapper] Pilot exit status: 0
[2026-03-09 13:16:43] 2026-03-09 12:16:43,586 [wrapper] pandaids: 7044426967
[2026-03-09 13:16:43] 2026-03-09 12:16:43,661 [wrapper] cleanup supervisor_pilot  854409 582396
[2026-03-09 13:16:43] 2026-03-09 12:16:43,664 [wrapper] Test setup, not cleaning
[2026-03-09 13:16:43] 2026-03-09 12:16:43,666 [wrapper] apfmon messages muted
[2026-03-09 13:16:43] 2026-03-09 12:16:43,669 [wrapper] ==== wrapper stdout END ====
[2026-03-09 13:16:43] 2026-03-09 12:16:43,671 [wrapper] ==== wrapper stderr END ====
[2026-03-09 13:16:43]  *** Error codes and diagnostics ***
[2026-03-09 13:16:43]     "exeErrorCode": 0,
[2026-03-09 13:16:43]     "exeErrorDiag": "",
[2026-03-09 13:16:43]     "pilotErrorCode": 0,
[2026-03-09 13:16:43]     "pilotErrorDiag": "",
[2026-03-09 13:16:43]  *** Listing of results directory ***
[2026-03-09 13:16:43] total 484660
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc    584627 Mar  7 04:03 pilot3.tar.gz
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc      5111 Mar  7 04:06 queuedata.json
[2026-03-09 13:16:43] -rwx------. 1 boinc boinc     36322 Mar  7 04:07 runpilot2-wrapper.sh
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc       100 Mar  9 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 13:16:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 09:35 run_atlas
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc       105 Mar  9 09:35 job.xml
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc      6561 Mar  9 09:35 init_data.xml
[2026-03-09 13:16:43] -rw-r--r--. 2 boinc boinc 281438105 Mar  9 09:35 EVNT.48958551._000102.pool.root.1
[2026-03-09 13:16:43] drwxrwx--x. 2 boinc boinc      4096 Mar  9 09:35 shared
[2026-03-09 13:16:43] -rw-r--r--. 2 boinc boinc    597945 Mar  9 09:35 input.tar.gz
[2026-03-09 13:16:43] -rw-r--r--. 2 boinc boinc     15845 Mar  9 09:35 start_atlas.sh
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc         0 Mar  9 09:35 boinc_lockfile
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc      2517 Mar  9 09:36 pandaJob.out
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc    987066 Mar  9 09:36 agis_schedconf.cvmfs.json
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc       447 Mar  9 09:36 workernode_map.json
[2026-03-09 13:16:43] drwx------. 5 boinc boinc      4096 Mar  9 09:36 pilot3
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc 206435966 Mar  9 13:15 HITS.48958554._002538.pool.root.1
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc       530 Mar  9 13:15 boinc_task_state.xml
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc      1034 Mar  9 13:15 memory_monitor_summary.json
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc   1511578 Mar  9 13:15 agis_ddmendpoints.agis.ALL.json
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc    389910 Mar  9 13:15 log.48958554._002538.job.log.tgz.1
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc      6407 Mar  9 13:15 heartbeat.json
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc      8192 Mar  9 13:16 boinc_mmap_file
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc        28 Mar  9 13:16 wrapper_checkpoint.txt
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc        95 Mar  9 13:16 pilot_heartbeat.json
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc      4828 Mar  9 13:16 pilotlog.txt
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc   1859821 Mar  9 13:16 log.48958554._002538.job.log.1
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc       357 Mar  9 13:16 output.list
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc       620 Mar  9 13:16 runtime_log
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc   2263040 Mar  9 13:16 result.tar.gz
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc      9205 Mar  9 13:16 runtime_log.err
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc       665 Mar  9 13:16 n3uMDmlBxI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUXULDmCAkNXm.diag
[2026-03-09 13:16:43] -rw-r--r--. 1 boinc boinc     20980 Mar  9 13:16 stderr.txt
[2026-03-09 13:16:43] HITS file was successfully produced:
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc 206435966 Mar  9 13:15 shared/HITS.pool.root.1
[2026-03-09 13:16:43]  *** Contents of shared directory: ***
[2026-03-09 13:16:43] total 479264
[2026-03-09 13:16:43] -rw-r--r--. 2 boinc boinc 281438105 Mar  9 09:35 ATLAS.root_0
[2026-03-09 13:16:43] -rw-r--r--. 2 boinc boinc    597945 Mar  9 09:35 input.tar.gz
[2026-03-09 13:16:43] -rw-r--r--. 2 boinc boinc     15845 Mar  9 09:35 start_atlas.sh
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc 206435966 Mar  9 13:15 HITS.pool.root.1
[2026-03-09 13:16:43] -rw-------. 1 boinc boinc   2263040 Mar  9 13:16 result.tar.gz
13:16:45 (578237): run_atlas exited; CPU time 50884.185995
13:16:45 (578237): called boinc_finish(0)

</stderr_txt>
]]>

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