Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:28:35 (3696751): wrapper (7.7.26015): starting
19:28:35 (3696751): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 19:28:35] Arguments: --nthreads 4
[2026-03-08 19:28:35] Threads: 4
[2026-03-08 19:28:35] Checking for CVMFS
[2026-03-08 19:28:35] No cvmfs_config command found, will try listing directly
[2026-03-08 19:28:35] CVMFS is ok
[2026-03-08 19:28:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 19:28:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 19:28:35] Further information can be found at the LHC@home message board.
[2026-03-08 19:28:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 19:28:35] Checking for apptainer binary...
[2026-03-08 19:28:35] which: no apptainer in ((null))
[2026-03-08 19:28:35] apptainer is not installed, using version from CVMFS
[2026-03-08 19:28:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 19:28:35] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot24/slots/4/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2026-03-08 19:28:35] apptainer works
[2026-03-08 19:28:36] Set ATHENA_PROC_NUMBER=4
[2026-03-08 19:28:36] Set ATHENA_CORE_NUMBER=4
[2026-03-08 19:28:36] Starting ATLAS job with PandaID=7044414420
[2026-03-08 19:28:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot24/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 23:39:43]  *** The last 200 lines of the pilot log: ***
[2026-03-08 23:39:43] 2026-03-08 22:38:39,171 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 23:39:43] 2026-03-08 22:38:39,171 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 23:39:43] 2026-03-08 22:38:39,172 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 23:39:43] 2026-03-08 22:38:39,172 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 23:39:43] 2026-03-08 22:38:39,177 | INFO     | fitting pss+swap vs Time
[2026-03-08 23:39:43] 2026-03-08 22:38:39,177 | INFO     | sum of square deviations: 4449244842.962987
[2026-03-08 23:39:43] 2026-03-08 22:38:39,179 | INFO     | sum of deviations: 64762721502.22226
[2026-03-08 23:39:43] 2026-03-08 22:38:39,179 | INFO     | mean x: 1773002071.0123458
[2026-03-08 23:39:43] 2026-03-08 22:38:39,180 | INFO     | mean y: 2308304.2592592593
[2026-03-08 23:39:43] 2026-03-08 22:38:39,180 | INFO     | intersect: -25805316000.670696
[2026-03-08 23:39:43] 2026-03-08 22:38:39,180 | INFO     | chi2: 2.976706702156488
[2026-03-08 23:39:43] 2026-03-08 22:38:39,180 | INFO     | sum of square deviations: 4180208155.4621844
[2026-03-08 23:39:43] 2026-03-08 22:38:39,182 | INFO     | sum of deviations: 63139222347.109245
[2026-03-08 23:39:43] 2026-03-08 22:38:39,182 | INFO     | mean x: 1773001918.512605
[2026-03-08 23:39:43] 2026-03-08 22:38:39,182 | INFO     | mean y: 2307384.130252101
[2026-03-08 23:39:43] 2026-03-08 22:38:39,182 | INFO     | intersect: -26777689733.6069
[2026-03-08 23:39:43] 2026-03-08 22:38:39,183 | INFO     | chi2: 2.9791676258877686
[2026-03-08 23:39:43] 2026-03-08 22:38:39,183 | INFO     | current chi2=2.9791676258877686 (change=-0.08267269763250969 %)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,183 | INFO     | right removable region: 237
[2026-03-08 23:39:43] 2026-03-08 22:38:39,183 | INFO     | sum of square deviations: 4180206325.4621844
[2026-03-08 23:39:43] 2026-03-08 22:38:39,185 | INFO     | sum of deviations: 4929872335.789913
[2026-03-08 23:39:43] 2026-03-08 22:38:39,185 | INFO     | mean x: 1773002223.512605
[2026-03-08 23:39:43] 2026-03-08 22:38:39,185 | INFO     | mean y: 2342073.4033613447
[2026-03-08 23:39:43] 2026-03-08 22:38:39,185 | INFO     | intersect: -2088625197.6971583
[2026-03-08 23:39:43] 2026-03-08 22:38:39,186 | INFO     | chi2: 0.035917117617533564
[2026-03-08 23:39:43] 2026-03-08 22:38:39,186 | INFO     | current chi2=0.035917117617533564 (change=98.79339413616017 %)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,186 | INFO     | sum of square deviations: 3922237782.961373
[2026-03-08 23:39:43] 2026-03-08 22:38:39,188 | INFO     | sum of deviations: 147451799.67381996
[2026-03-08 23:39:43] 2026-03-08 22:38:39,188 | INFO     | mean x: 1773002376.0128756
[2026-03-08 23:39:43] 2026-03-08 22:38:39,188 | INFO     | mean y: 2344872.442060086
[2026-03-08 23:39:43] 2026-03-08 22:38:39,188 | INFO     | intersect: -64309013.84314885
[2026-03-08 23:39:43] 2026-03-08 22:38:39,188 | INFO     | chi2: 0.007740635932851902
[2026-03-08 23:39:43] 2026-03-08 22:38:39,188 | INFO     | current chi2=0.007740635932851902 (change=78.44861601847144 %)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,189 | INFO     | sum of square deviations: 3675106652.960519
[2026-03-08 23:39:43] 2026-03-08 22:38:39,190 | INFO     | sum of deviations: 345572057.2631587
[2026-03-08 23:39:43] 2026-03-08 22:38:39,190 | INFO     | mean x: 1773002528.5131578
[2026-03-08 23:39:43] 2026-03-08 22:38:39,191 | INFO     | mean y: 2344748.9122807016
[2026-03-08 23:39:43] 2026-03-08 22:38:39,191 | INFO     | intersect: -164371536.94503108
[2026-03-08 23:39:43] 2026-03-08 22:38:39,191 | INFO     | chi2: 0.007684038317658225
[2026-03-08 23:39:43] 2026-03-08 22:38:39,191 | INFO     | current chi2=0.007684038317658225 (change=0.7311752636947004 %)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,191 | INFO     | left removable region: 30
[2026-03-08 23:39:43] 2026-03-08 22:38:39,192 | INFO     | sum of square deviations: 2750295288.0
[2026-03-08 23:39:43] 2026-03-08 22:38:39,193 | INFO     | sum of deviations: 3623540483.0000005
[2026-03-08 23:39:43] 2026-03-08 22:38:39,193 | INFO     | mean x: 1773002803.0
[2026-03-08 23:39:43] 2026-03-08 22:38:39,193 | INFO     | mean y: 2341983.652173913
[2026-03-08 23:39:43] 2026-03-08 22:38:39,193 | INFO     | intersect: -2333606254.7694798
[2026-03-08 23:39:43] 2026-03-08 22:38:39,194 | INFO     | chi2: 0.0029915059611260917
[2026-03-08 23:39:43] 2026-03-08 22:38:39,194 | INFO     | current memory leak: 1.32 B/s (using 207 data points, chi2=0.00)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,198 | INFO     | could have reported an average CPU frequency of 2663 MHz (12 samples)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,198 | INFO     | ..............................
[2026-03-08 23:39:43] 2026-03-08 22:38:39,198 | INFO     | . Timing measurements:
[2026-03-08 23:39:43] 2026-03-08 22:38:39,198 | INFO     | . get job = 0 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,198 | INFO     | . initial setup = 35 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,198 | INFO     | . payload setup = 45 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,199 | INFO     | . stage-in = 0 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,199 | INFO     | . payload execution = 14850 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,199 | INFO     | . stage-out = 1 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,199 | INFO     | . log creation = 0 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,199 | INFO     | ..............................
[2026-03-08 23:39:43] 2026-03-08 22:38:39,379 | INFO     | 
[2026-03-08 23:39:43] 2026-03-08 22:38:39,379 | INFO     | job summary report
[2026-03-08 23:39:43] 2026-03-08 22:38:39,379 | INFO     | --------------------------------------------------
[2026-03-08 23:39:43] 2026-03-08 22:38:39,379 | INFO     | PanDA job id: 7044414420
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | task id: 48958554
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | errors: (none)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | pilot state: finished 
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | transexitcode: 0
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | exeerrorcode: 0
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | exeerrordiag: 
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | exitcode: 0
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | exitmsg: OK
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | cpuconsumptiontime: 47769 s
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | nevents: 400
[2026-03-08 23:39:43] 2026-03-08 22:38:39,380 | INFO     | neventsw: 0
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | pid: 3707596
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | pgrp: 3707596
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | corecount: 4
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | event service: False
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | sizes: {0: 2295266, 1: 2256692, 2: 2295811, 14900: 2326664, 14902: 2331028, 14904: 2331166}
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | --------------------------------------------------
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | 
[2026-03-08 23:39:43] 2026-03-08 22:38:39,381 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot24/slots/4
[2026-03-08 23:39:43] 2026-03-08 22:38:39,422 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | job 7044414420 has completed (purged errors)
[2026-03-08 23:39:43] 2026-03-08 22:38:39,424 | INFO     | overall cleanup function is called
[2026-03-08 23:39:43] 2026-03-08 22:38:40,180 | INFO     | number of running child processes to parent process 3707596: 1
[2026-03-08 23:39:43] 2026-03-08 22:38:40,180 | INFO     | maximum number of monitored processes: 6
[2026-03-08 23:39:43] 2026-03-08 22:38:40,180 | INFO     | aborting job monitoring since job object (job id=7044414420) has expired
[2026-03-08 23:39:43] 2026-03-08 22:38:40,445 | INFO     | --- collectZombieJob: --- 10, [3707596]
[2026-03-08 23:39:43] 2026-03-08 22:38:40,445 | INFO     | zombie collector waiting for pid 3707596
[2026-03-08 23:39:43] 2026-03-08 22:38:40,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 23:39:43] 2026-03-08 22:38:40,445 | INFO     | collected zombie processes
[2026-03-08 23:39:43] 2026-03-08 22:38:40,446 | INFO     | will attempt to kill all subprocesses of pid=3707596
[2026-03-08 23:39:43] 2026-03-08 22:38:41,396 | INFO     | process IDs to be killed: [3707596] (in reverse order)
[2026-03-08 23:39:43] 2026-03-08 22:38:41,739 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 23:39:43] 2026-03-08 22:38:41,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 23:39:43] 2026-03-08 22:38:41,777 | INFO     | did not find any defunct processes belonging to 3707596
[2026-03-08 23:39:43] 2026-03-08 22:38:41,816 | INFO     | did not find any defunct processes belonging to 3707596
[2026-03-08 23:39:43] 2026-03-08 22:38:41,816 | INFO     | ready for new job
[2026-03-08 23:39:43] 2026-03-08 22:38:41,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 23:39:43] 2026-03-08 22:38:41,819 | INFO     | **************************************
[2026-03-08 23:39:43] 2026-03-08 22:38:41,819 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 23:39:43] 2026-03-08 22:38:41,819 | INFO     | **************************************
[2026-03-08 23:39:43] 2026-03-08 22:38:41,819 | INFO     | 
[2026-03-08 23:39:43] 2026-03-08 22:38:41,827 | INFO     | architecture information:
[2026-03-08 23:39:43] 2026-03-08 22:38:41,832 | INFO     | executing command: cat /etc/os-release
[2026-03-08 23:39:43] 2026-03-08 22:38:41,863 | INFO     | cat /etc/os-release:
[2026-03-08 23:39:43] NAME="CentOS Linux"
[2026-03-08 23:39:43] VERSION="7 (Core)"
[2026-03-08 23:39:43] ID="centos"
[2026-03-08 23:39:43] ID_LIKE="rhel fedora"
[2026-03-08 23:39:43] VERSION_ID="7"
[2026-03-08 23:39:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 23:39:43] ANSI_COLOR="0;31"
[2026-03-08 23:39:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 23:39:43] HOME_URL="https://www.centos.org/"
[2026-03-08 23:39:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 23:39:43] 
[2026-03-08 23:39:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 23:39:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 23:39:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 23:39:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 23:39:43] 
[2026-03-08 23:39:43] 2026-03-08 22:38:41,863 | INFO     | **************************************
[2026-03-08 23:39:43] 2026-03-08 22:38:42,365 | INFO     | executing command: df -mP /var/lib/boinc/var/slot24/slots/4
[2026-03-08 23:39:43] 2026-03-08 22:38:42,403 | INFO     | sufficient remaining disk space (42219864064 B)
[2026-03-08 23:39:43] 2026-03-08 22:38:42,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 23:39:43] 2026-03-08 22:38:42,403 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 23:39:43] 2026-03-08 22:38:42,404 | INFO     | update_server=False
[2026-03-08 23:39:43] 2026-03-08 22:38:42,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 23:39:43] 2026-03-08 22:38:42,498 | INFO     | all job control threads have been joined
[2026-03-08 23:39:43] 2026-03-08 22:38:42,664 | INFO     | all payload control threads have been joined
[2026-03-08 23:39:43] 2026-03-08 22:38:42,683 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-08 23:39:43] 2026-03-08 22:38:42,683 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-08 23:39:43] 2026-03-08 22:38:42,684 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 23:39:43] 2026-03-08 22:38:42,684 | INFO     | will abort loop
[2026-03-08 23:39:43] 2026-03-08 22:38:42,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 23:39:43] 2026-03-08 22:38:43,348 | INFO     | all data control threads have been joined
[2026-03-08 23:39:43] 2026-03-08 22:38:43,408 | INFO     | [job] retrieve thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,416 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 23:39:43] 2026-03-08 22:38:43,503 | INFO     | [job] control thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,546 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,669 | INFO     | [payload] control thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,689 | INFO     | [job] job monitor thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,741 | INFO     | [payload] failed_post thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,809 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,848 | INFO     | [job] validate thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:43,929 | INFO     | [data] copytool_in thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:44,176 | INFO     | [payload] validate_post thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:44,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 23:39:43] 2026-03-08 22:38:44,353 | INFO     | [data] control thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:44,386 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:44,810 | INFO     | [data] copytool_out thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:45,330 | INFO     | [job] queue monitor thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:47,423 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:38:52,774 | INFO     | job.realtimelogging is not enabled
[2026-03-08 23:39:43] 2026-03-08 22:38:53,779 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 23:39:43] 2026-03-08 22:39:11,815 | INFO     | PID=3701140 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-08 23:39:43] 2026-03-08 22:39:11,815 | INFO     | .. there are 25 such processes running
[2026-03-08 23:39:43] 2026-03-08 22:39:11,817 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 23:39:43] 2026-03-08 22:39:11,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 23:39:43] 2026-03-08 22:39:11,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 23:39:43] 2026-03-08 22:39:36,875 | INFO     | [monitor] cgroup control has ended
[2026-03-08 23:39:43] 2026-03-08 22:39:37,921 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23116777948992)>', '<ExcThread(monitor, started 23116542920448)>']
[2026-03-08 23:39:43] 2026-03-08 22:39:37,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 23:39:43] 2026-03-08 22:39:37,947 | INFO     | [monitor] control thread has ended
[2026-03-08 23:39:43] 2026-03-08 22:39:42,946 | INFO     | all workflow threads have been joined
[2026-03-08 23:39:43] 2026-03-08 22:39:42,946 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 23:39:43] 2026-03-08 22:39:42,947 | INFO     | traces error code: 0
[2026-03-08 23:39:43] 2026-03-08 22:39:42,947 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 23:39:43] 2026-03-08 22:39:43,124 [wrapper] ==== pilot stdout END ====
[2026-03-08 23:39:43] 2026-03-08 22:39:43,129 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 23:39:43] 2026-03-08 22:39:43,133 [wrapper] pilotpid: 3701140
[2026-03-08 23:39:43] 2026-03-08 22:39:43,137 [wrapper] Pilot exit status: 0
[2026-03-08 23:39:43] 2026-03-08 22:39:43,229 [wrapper] pandaids: 7044414420
[2026-03-08 23:39:43] 2026-03-08 22:39:43,454 [wrapper] cleanup supervisor_pilot 4179732 3701141
[2026-03-08 23:39:43] 2026-03-08 22:39:43,459 [wrapper] Test setup, not cleaning
[2026-03-08 23:39:43] 2026-03-08 22:39:43,467 [wrapper] apfmon messages muted
[2026-03-08 23:39:43] 2026-03-08 22:39:43,471 [wrapper] ==== wrapper stdout END ====
[2026-03-08 23:39:43] 2026-03-08 22:39:43,480 [wrapper] ==== wrapper stderr END ====
[2026-03-08 23:39:43]  *** Error codes and diagnostics ***
[2026-03-08 23:39:43]     "exeErrorCode": 0,
[2026-03-08 23:39:43]     "exeErrorDiag": "",
[2026-03-08 23:39:43]     "pilotErrorCode": 0,
[2026-03-08 23:39:43]     "pilotErrorDiag": "",
[2026-03-08 23:39:43]  *** Listing of results directory ***
[2026-03-08 23:39:43] total 479856
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc      5111 Mar  7 04:03 queuedata.json
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc    584627 Mar  7 04:03 pilot3.tar.gz
[2026-03-08 23:39:43] -rwx------. 1 boinc boinc     36322 Mar  7 04:04 runpilot2-wrapper.sh
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc       100 Mar  8 19:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 23:39:43] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 19:28 run_atlas
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc       105 Mar  8 19:28 job.xml
[2026-03-08 23:39:43] -rw-r--r--. 2 boinc boinc 277036907 Mar  8 19:28 EVNT.48958551._000094.pool.root.1
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc      6617 Mar  8 19:28 init_data.xml
[2026-03-08 23:39:43] -rw-r--r--. 2 boinc boinc     15845 Mar  8 19:28 start_atlas.sh
[2026-03-08 23:39:43] drwxrwx--x. 2 boinc boinc      4096 Mar  8 19:28 shared
[2026-03-08 23:39:43] -rw-r--r--. 2 boinc boinc    597945 Mar  8 19:28 input.tar.gz
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc         0 Mar  8 19:28 boinc_lockfile
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc      2516 Mar  8 19:28 pandaJob.out
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc    999212 Mar  8 19:29 agis_schedconf.cvmfs.json
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc       443 Mar  8 19:30 workernode_map.json
[2026-03-08 23:39:43] drwx------. 5 boinc boinc      4096 Mar  8 19:30 pilot3
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc 205816673 Mar  8 23:37 HITS.48958554._002325.pool.root.1
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc       531 Mar  8 23:38 boinc_task_state.xml
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc      1025 Mar  8 23:38 memory_monitor_summary.json
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc   1511578 Mar  8 23:38 agis_ddmendpoints.agis.ALL.json
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc    384225 Mar  8 23:38 log.48958554._002325.job.log.tgz.1
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc      6346 Mar  8 23:38 heartbeat.json
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc        95 Mar  8 23:39 pilot_heartbeat.json
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc      8192 Mar  8 23:39 boinc_mmap_file
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc        28 Mar  8 23:39 wrapper_checkpoint.txt
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc      5088 Mar  8 23:39 pilotlog.txt
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc   1911874 Mar  8 23:39 log.48958554._002325.job.log.1
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc       357 Mar  8 23:39 output.list
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc       620 Mar  8 23:39 runtime_log
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc   2314240 Mar  8 23:39 result.tar.gz
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc      9205 Mar  8 23:39 runtime_log.err
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc       666 Mar  8 23:39 DVhKDmf8wI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmCVULDm5HHUim.diag
[2026-03-08 23:39:43] -rw-r--r--. 1 boinc boinc     20872 Mar  8 23:39 stderr.txt
[2026-03-08 23:39:43] HITS file was successfully produced:
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc 205816673 Mar  8 23:37 shared/HITS.pool.root.1
[2026-03-08 23:39:43]  *** Contents of shared directory: ***
[2026-03-08 23:39:43] total 474408
[2026-03-08 23:39:43] -rw-r--r--. 2 boinc boinc 277036907 Mar  8 19:28 ATLAS.root_0
[2026-03-08 23:39:43] -rw-r--r--. 2 boinc boinc     15845 Mar  8 19:28 start_atlas.sh
[2026-03-08 23:39:43] -rw-r--r--. 2 boinc boinc    597945 Mar  8 19:28 input.tar.gz
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc 205816673 Mar  8 23:37 HITS.pool.root.1
[2026-03-08 23:39:43] -rw-------. 1 boinc boinc   2314240 Mar  8 23:39 result.tar.gz
23:39:45 (3696751): run_atlas exited; CPU time 48729.394674
23:39:45 (3696751): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN