Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:00:32 (1069109): wrapper (7.7.26015): starting
01:00:32 (1069109): wrapper: running run_atlas (--nthreads 8)
[2026-03-07 01:00:32] Arguments: --nthreads 8
[2026-03-07 01:00:32] Threads: 8
[2026-03-07 01:00:32] Checking for CVMFS
[2026-03-07 01:00:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 01:00:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 01:00:32] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 01:00:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 01:00:33] 2.13.0.0 971793 49 49036 156994 2 188 3096513 6144000 5520 130560 0 234603 99.992 4288 1307 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 01:00:33] CVMFS is ok
[2026-03-07 01:00:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 01:00:33] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 01:00:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 01:00:33] Further information can be found at the LHC@home message board.
[2026-03-07 01:00:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 01:00:33] Checking for apptainer binary...
[2026-03-07 01:00:33] apptainer is not installed, using version from CVMFS
[2026-03-07 01:00:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 01:00:33] mz32
[2026-03-07 01:00:33] apptainer works
[2026-03-07 01:00:33] Set ATHENA_PROC_NUMBER=8
[2026-03-07 01:00:33] Set ATHENA_CORE_NUMBER=8
[2026-03-07 01:00:33] Starting ATLAS job with PandaID=7038495447
[2026-03-07 01:00:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 02:40:08]  *** The last 200 lines of the pilot log: ***
[2026-03-07 02:40:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 02:40:09]  is_altstaged=None
[2026-03-07 02:40:09]  is_tar=False
[2026-03-07 02:40:09]  lfn=log.48955015._000162.job.log.tgz.1
[2026-03-07 02:40:09]  mtime=0
[2026-03-07 02:40:09]  protocol_id=None
[2026-03-07 02:40:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 02:40:09]  replicas=None
[2026-03-07 02:40:09]  scope=mc23_13p6TeV
[2026-03-07 02:40:09]  status=None
[2026-03-07 02:40:09]  status_code=0
[2026-03-07 02:40:09]  storage_token=
[2026-03-07 02:40:09]  surl=/var/lib/boinc-client/slots/12/PanDA_Pilot-7038495447/log.48955015._000162.job.log.tgz.1
[2026-03-07 02:40:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/c9/log.48955015._000162.job.log.tgz.1
[2026-03-07 02:40:09]  workdir=None
[2026-03-07 02:40:09] ]
[2026-03-07 02:40:09] 2026-03-07 10:39:29,293 | INFO     | transferring file log.48955015._000162.job.log.tgz.1 from /var/lib/boinc-client/slots/12/PanDA_Pilot-7038495447/log.48955015._000162.job.log.tgz.1 to /var/lib/boin
[2026-03-07 02:40:09] 2026-03-07 10:39:29,294 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/12/PanDA_Pilot-7038495447/log.48955015._000162.job.log.tgz.1 /var/lib/boinc-client/slots/12/log.4895
[2026-03-07 02:40:09] 2026-03-07 10:39:29,321 | INFO     | adding to output.list: log.48955015._000162.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/52/c9/log.48955015._000162.job.log.tg
[2026-03-07 02:40:09] 2026-03-07 10:39:29,322 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 02:40:09] 2026-03-07 10:39:29,322 | INFO     | summary of transferred files:
[2026-03-07 02:40:09] 2026-03-07 10:39:29,322 | INFO     |  -- lfn=log.48955015._000162.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 02:40:09] 2026-03-07 10:39:29,323 | INFO     | stage-out finished correctly
[2026-03-07 02:40:09] 2026-03-07 10:39:29,848 | INFO     | time since job start (5916s) is within the limit (349056.0s)
[2026-03-07 02:40:09] 2026-03-07 10:39:30,556 | WARNING  | process 1078574 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 02:40:09] 2026-03-07 10:39:30,556 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-7038495447/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 02:40:09] 2026-03-07 10:39:31,208 | INFO     | number of running child processes to parent process 1078574: 1
[2026-03-07 02:40:09] 2026-03-07 10:39:31,208 | INFO     | maximum number of monitored processes: 6
[2026-03-07 02:40:09] 2026-03-07 10:39:31,850 | INFO     | time since job start (5918s) is within the limit (349056.0s)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,650 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 02:40:09] 2026-03-07 10:39:32,776 | INFO     | job 7038495447 has state=finished
[2026-03-07 02:40:09] 2026-03-07 10:39:32,777 | INFO     | preparing for final server update for job 7038495447 in state='finished'
[2026-03-07 02:40:09] 2026-03-07 10:39:32,777 | INFO     | reading metadata from: /var/lib/boinc-client/slots/12/PanDA_Pilot-7038495447/jobReport.json
[2026-03-07 02:40:09] 2026-03-07 10:39:32,779 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/12/workernode_map.json
[2026-03-07 02:40:09] 2026-03-07 10:39:32,779 | INFO     | this job has now completed (state=finished)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,780 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,780 | INFO     | log transfer has been attempted: DONE
[2026-03-07 02:40:09] 2026-03-07 10:39:32,780 | INFO     | job 7038495447 has finished - writing final server update
[2026-03-07 02:40:09] 2026-03-07 10:39:32,780 | INFO     | total number of processed events: 400 (read)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,804 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-7038495447/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,804 | INFO     | extracted standard info from prmon json
[2026-03-07 02:40:09] 2026-03-07 10:39:32,804 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 02:40:09] 2026-03-07 10:39:32,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 02:40:09] 2026-03-07 10:39:32,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 02:40:09] 2026-03-07 10:39:32,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 02:40:09] 2026-03-07 10:39:32,807 | INFO     | fitting pss+swap vs Time
[2026-03-07 02:40:09] 2026-03-07 10:39:32,807 | INFO     | sum of square deviations: 226022842.5
[2026-03-07 02:40:09] 2026-03-07 10:39:32,808 | INFO     | sum of deviations: 1223958229.000001
[2026-03-07 02:40:09] 2026-03-07 10:39:32,808 | INFO     | mean x: 1772877097.5
[2026-03-07 02:40:09] 2026-03-07 10:39:32,808 | INFO     | mean y: 2502512.488888889
[2026-03-07 02:40:09] 2026-03-07 10:39:32,808 | INFO     | intersect: -9597976308.543379
[2026-03-07 02:40:09] 2026-03-07 10:39:32,808 | INFO     | chi2: 0.01597121529575021
[2026-03-07 02:40:09] 2026-03-07 10:39:32,808 | INFO     | current memory leak: 5.42 B/s (using 90 data points, chi2=0.02)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | could have reported an average CPU frequency of 1972 MHz (7 samples)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | ..............................
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . Timing measurements:
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . get job = 0 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . initial setup = 9 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . payload setup = 7 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . stage-in = 0 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . payload execution = 5890 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . stage-out = 1 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,809 | INFO     | . log creation = 0 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,810 | INFO     | ..............................
[2026-03-07 02:40:09] 2026-03-07 10:39:32,877 | INFO     | 
[2026-03-07 02:40:09] 2026-03-07 10:39:32,877 | INFO     | job summary report
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | --------------------------------------------------
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | PanDA job id: 7038495447
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | task id: 48955015
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | errors: (none)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | pilot state: finished 
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | transexitcode: 0
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | exeerrorcode: 0
[2026-03-07 02:40:09] 2026-03-07 10:39:32,878 | INFO     | exeerrordiag: 
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | exitcode: 0
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | exitmsg: OK
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | cpuconsumptiontime: 43840 s
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | nevents: 400
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | neventsw: 0
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | pid: 1078574
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | pgrp: 1078574
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | corecount: 8
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | event service: False
[2026-03-07 02:40:09] 2026-03-07 10:39:32,879 | INFO     | sizes: {0: 2295549, 1: 2295811, 11: 2295839, 5902: 2322706, 5904: 2331720, 5908: 2332098}
[2026-03-07 02:40:09] 2026-03-07 10:39:32,880 | INFO     | --------------------------------------------------
[2026-03-07 02:40:09] 2026-03-07 10:39:32,880 | INFO     | 
[2026-03-07 02:40:09] 2026-03-07 10:39:32,880 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2026-03-07 02:40:09] 2026-03-07 10:39:32,912 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,912 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,912 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,912 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,912 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 02:40:09] 2026-03-07 10:39:32,914 | INFO     | job 7038495447 has completed (purged errors)
[2026-03-07 02:40:09] 2026-03-07 10:39:32,915 | INFO     | overall cleanup function is called
[2026-03-07 02:40:09] 2026-03-07 10:39:33,924 | INFO     | --- collectZombieJob: --- 10, [1078574]
[2026-03-07 02:40:09] 2026-03-07 10:39:33,925 | INFO     | zombie collector waiting for pid 1078574
[2026-03-07 02:40:09] 2026-03-07 10:39:33,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 02:40:09] 2026-03-07 10:39:33,925 | INFO     | collected zombie processes
[2026-03-07 02:40:09] 2026-03-07 10:39:33,925 | INFO     | will attempt to kill all subprocesses of pid=1078574
[2026-03-07 02:40:09] 2026-03-07 10:39:34,594 | INFO     | process IDs to be killed: [1078574] (in reverse order)
[2026-03-07 02:40:09] 2026-03-07 10:39:34,806 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 02:40:09] 2026-03-07 10:39:34,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 02:40:09] 2026-03-07 10:39:34,823 | INFO     | did not find any defunct processes belonging to 1078574
[2026-03-07 02:40:09] 2026-03-07 10:39:34,838 | INFO     | did not find any defunct processes belonging to 1078574
[2026-03-07 02:40:09] 2026-03-07 10:39:34,839 | INFO     | ready for new job
[2026-03-07 02:40:09] 2026-03-07 10:39:34,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 02:40:09] 2026-03-07 10:39:34,841 | INFO     | **************************************
[2026-03-07 02:40:09] 2026-03-07 10:39:34,841 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 02:40:09] 2026-03-07 10:39:34,841 | INFO     | **************************************
[2026-03-07 02:40:09] 2026-03-07 10:39:34,841 | INFO     | 
[2026-03-07 02:40:09] 2026-03-07 10:39:34,851 | INFO     | architecture information:
[2026-03-07 02:40:09] 2026-03-07 10:39:34,851 | INFO     | executing command: cat /etc/os-release
[2026-03-07 02:40:09] 2026-03-07 10:39:34,874 | INFO     | cat /etc/os-release:
[2026-03-07 02:40:09] NAME="CentOS Linux"
[2026-03-07 02:40:09] VERSION="7 (Core)"
[2026-03-07 02:40:09] ID="centos"
[2026-03-07 02:40:09] ID_LIKE="rhel fedora"
[2026-03-07 02:40:09] VERSION_ID="7"
[2026-03-07 02:40:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 02:40:09] ANSI_COLOR="0;31"
[2026-03-07 02:40:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 02:40:09] HOME_URL="https://www.centos.org/"
[2026-03-07 02:40:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 02:40:09] 
[2026-03-07 02:40:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 02:40:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 02:40:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 02:40:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 02:40:09] 
[2026-03-07 02:40:09] 2026-03-07 10:39:34,874 | INFO     | **************************************
[2026-03-07 02:40:09] 2026-03-07 10:39:35,377 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2026-03-07 02:40:09] 2026-03-07 10:39:35,412 | INFO     | sufficient remaining disk space (367643328512 B)
[2026-03-07 02:40:09] 2026-03-07 10:39:35,412 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 02:40:09] 2026-03-07 10:39:35,412 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 02:40:09] 2026-03-07 10:39:35,412 | INFO     | update_server=False
[2026-03-07 02:40:09] 2026-03-07 10:39:35,413 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 02:40:09] 2026-03-07 10:39:35,413 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 02:40:09] 2026-03-07 10:39:35,413 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 02:40:09] 2026-03-07 10:39:35,414 | INFO     | aborting loop
[2026-03-07 02:40:09] 2026-03-07 10:39:35,799 | INFO     | all payload control threads have been joined
[2026-03-07 02:40:09] 2026-03-07 10:39:36,269 | INFO     | all data control threads have been joined
[2026-03-07 02:40:09] 2026-03-07 10:39:36,416 | INFO     | [job] job monitor thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:36,418 | INFO     | [job] retrieve thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:36,607 | INFO     | all job control threads have been joined
[2026-03-07 02:40:09] 2026-03-07 10:39:36,640 | INFO     | [job] validate thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:36,645 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:36,805 | INFO     | [payload] control thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,050 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,235 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,275 | INFO     | [data] control thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,343 | INFO     | [payload] validate_post thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,419 | INFO     | [data] copytool_out thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,613 | INFO     | [job] control thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,661 | INFO     | [payload] failed_post thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,809 | INFO     | [data] copytool_in thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:37,886 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 02:40:09] 2026-03-07 10:39:38,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 02:40:09] 2026-03-07 10:39:38,891 | INFO     | [job] queue monitor thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:42,789 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:39:46,418 | INFO     | job.realtimelogging is not enabled
[2026-03-07 02:40:09] 2026-03-07 10:39:47,424 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 02:40:09] 2026-03-07 10:40:02,712 | INFO     | [monitor] cgroup control has ended
[2026-03-07 02:40:09] 2026-03-07 10:40:03,570 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124835505444672)>', '<ExcThread(monitor, started 124834801497856)>']
[2026-03-07 02:40:09] 2026-03-07 10:40:05,743 | INFO     | PID=1073407 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-07 02:40:09] 2026-03-07 10:40:05,743 | INFO     | .. there are 14 such processes running
[2026-03-07 02:40:09] 2026-03-07 10:40:05,744 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 02:40:09] 2026-03-07 10:40:05,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 02:40:09] 2026-03-07 10:40:05,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 02:40:09] 2026-03-07 10:40:05,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 02:40:09] 2026-03-07 10:40:05,744 | INFO     | [monitor] control thread has ended
[2026-03-07 02:40:09] 2026-03-07 10:40:08,591 | INFO     | all workflow threads have been joined
[2026-03-07 02:40:09] 2026-03-07 10:40:08,592 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 02:40:09] 2026-03-07 10:40:08,592 | INFO     | traces error code: 0
[2026-03-07 02:40:09] 2026-03-07 10:40:08,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 02:40:09] 2026-03-07 10:40:08,735 [wrapper] ==== pilot stdout END ====
[2026-03-07 02:40:09] 2026-03-07 10:40:08,739 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 02:40:09] 2026-03-07 10:40:08,743 [wrapper] pilotpid: 1073407
[2026-03-07 02:40:09] 2026-03-07 10:40:08,749 [wrapper] Pilot exit status: 0
[2026-03-07 02:40:09] 2026-03-07 10:40:08,763 [wrapper] pandaids: 7038495447
[2026-03-07 02:40:09] 2026-03-07 10:40:08,894 [wrapper] cleanup supervisor_pilot 1247765 1073408
[2026-03-07 02:40:09] 2026-03-07 10:40:08,898 [wrapper] Test setup, not cleaning
[2026-03-07 02:40:09] 2026-03-07 10:40:08,903 [wrapper] apfmon messages muted
[2026-03-07 02:40:09] 2026-03-07 10:40:08,907 [wrapper] ==== wrapper stdout END ====
[2026-03-07 02:40:09] 2026-03-07 10:40:08,910 [wrapper] ==== wrapper stderr END ====
[2026-03-07 02:40:09]  *** Error codes and diagnostics ***
[2026-03-07 02:40:09]     "exeErrorCode": 0,
[2026-03-07 02:40:09]     "exeErrorDiag": "",
[2026-03-07 02:40:09]     "pilotErrorCode": 0,
[2026-03-07 02:40:09]     "pilotErrorDiag": "",
[2026-03-07 02:40:09]  *** Listing of results directory ***
[2026-03-07 02:40:09] total 617416
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc    584627 Mar  4 05:58 pilot3.tar.gz
[2026-03-07 02:40:09] -rwx------ 1 boinc boinc     36322 Mar  4 05:59 runpilot2-wrapper.sh
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc      5111 Mar  4 06:00 queuedata.json
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc       100 Mar  7 01:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 02:40:09] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 01:00 run_atlas
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc       105 Mar  7 01:00 job.xml
[2026-03-07 02:40:09] -rw-r--r-- 2 boinc boinc 442439587 Mar  7 01:00 EVNT.46701403._002046.pool.root.1
[2026-03-07 02:40:09] drwxrwx--x 2 boinc boinc      4096 Mar  7 01:00 shared
[2026-03-07 02:40:09] -rw-r--r-- 2 boinc boinc    597948 Mar  7 01:00 input.tar.gz
[2026-03-07 02:40:09] -rw-r--r-- 2 boinc boinc     15845 Mar  7 01:00 start_atlas.sh
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc         0 Mar  7 01:00 boinc_setup_complete
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc      9894 Mar  7 01:00 init_data.xml
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc         0 Mar  7 01:00 boinc_lockfile
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc      2567 Mar  7 01:00 pandaJob.out
[2026-03-07 02:40:09] -rw------- 1 boinc boinc    999161 Mar  7 01:00 agis_schedconf.cvmfs.json
[2026-03-07 02:40:09] -rw------- 1 boinc boinc   1521291 Mar  7 01:00 agis_ddmendpoints.agis.ALL.json
[2026-03-07 02:40:09] -rw------- 1 boinc boinc       417 Mar  7 01:00 workernode_map.json
[2026-03-07 02:40:09] drwx------ 5 boinc boinc      4096 Mar  7 01:00 pilot3
[2026-03-07 02:40:09] -rw------- 1 boinc boinc 183470870 Mar  7 02:38 HITS.48955015._000162.pool.root.1
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc       530 Mar  7 02:39 boinc_task_state.xml
[2026-03-07 02:40:09] -rw------- 1 boinc boinc        95 Mar  7 02:39 pilot_heartbeat.json
[2026-03-07 02:40:09] -rw------- 1 boinc boinc      1022 Mar  7 02:39 memory_monitor_summary.json
[2026-03-07 02:40:09] -rw------- 1 boinc boinc    342811 Mar  7 02:39 log.48955015._000162.job.log.tgz.1
[2026-03-07 02:40:09] -rw------- 1 boinc boinc      6258 Mar  7 02:39 heartbeat.json
[2026-03-07 02:40:09] -rw------- 1 boinc boinc      4902 Mar  7 02:40 pilotlog.txt
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc      8192 Mar  7 02:40 boinc_mmap_file
[2026-03-07 02:40:09] -rw------- 1 boinc boinc    849843 Mar  7 02:40 log.48955015._000162.job.log.1
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc        27 Mar  7 02:40 wrapper_checkpoint.txt
[2026-03-07 02:40:09] -rw------- 1 boinc boinc       357 Mar  7 02:40 output.list
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc       620 Mar  7 02:40 runtime_log
[2026-03-07 02:40:09] -rw------- 1 boinc boinc   1208320 Mar  7 02:40 result.tar.gz
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc      8913 Mar  7 02:40 runtime_log.err
[2026-03-07 02:40:09] -rw------- 1 boinc boinc       648 Mar  7 02:40 GIeNDmwv1H9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3cILDmUm5Xqn.diag
[2026-03-07 02:40:09] -rw-r--r-- 1 boinc boinc     21557 Mar  7 02:40 stderr.txt
[2026-03-07 02:40:09] HITS file was successfully produced:
[2026-03-07 02:40:09] -rw------- 1 boinc boinc 183470870 Mar  7 02:38 shared/HITS.pool.root.1
[2026-03-07 02:40:09]  *** Contents of shared directory: ***
[2026-03-07 02:40:09] total 613032
[2026-03-07 02:40:09] -rw-r--r-- 2 boinc boinc 442439587 Mar  7 01:00 ATLAS.root_0
[2026-03-07 02:40:09] -rw-r--r-- 2 boinc boinc    597948 Mar  7 01:00 input.tar.gz
[2026-03-07 02:40:09] -rw-r--r-- 2 boinc boinc     15845 Mar  7 01:00 start_atlas.sh
[2026-03-07 02:40:09] -rw------- 1 boinc boinc 183470870 Mar  7 02:38 HITS.pool.root.1
[2026-03-07 02:40:09] -rw------- 1 boinc boinc   1208320 Mar  7 02:40 result.tar.gz
02:40:10 (1069109): run_atlas exited; CPU time 44150.397120
02:40:10 (1069109): called boinc_finish(0)

</stderr_txt>
]]>

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