Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:58:53 (292163): wrapper (7.7.26015): starting
14:58:53 (292163): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 14:58:53] Arguments: --nthreads 4
[2026-03-07 14:58:53] Threads: 4
[2026-03-07 14:58:53] Checking for CVMFS
[2026-03-07 14:58:53] No cvmfs_config command found, will try listing directly
[2026-03-07 14:58:53] CVMFS is ok
[2026-03-07 14:58:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 14:58:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 14:58:53] Further information can be found at the LHC@home message board.
[2026-03-07 14:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 14:58:53] Checking for apptainer binary...
[2026-03-07 14:58:53] which: no apptainer in ((null))
[2026-03-07 14:58:53] apptainer is not installed, using version from CVMFS
[2026-03-07 14:58:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 14:58:53] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot56/slots/8/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2026-03-07 14:58:53] apptainer works
[2026-03-07 14:58:53] Set ATHENA_PROC_NUMBER=4
[2026-03-07 14:58:53] Set ATHENA_CORE_NUMBER=4
[2026-03-07 14:58:53] Starting ATLAS job with PandaID=7044702174
[2026-03-07 14:58:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot56/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 16:33:20]  *** The last 200 lines of the pilot log: ***
[2026-03-07 16:33:20]  guid=99f5fb32-5280-4f59-aa16-b8802985ad6f
[2026-03-07 16:33:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 16:33:20]  is_altstaged=None
[2026-03-07 16:33:20]  is_tar=False
[2026-03-07 16:33:20]  lfn=log.48958643._000678.job.log.tgz.1
[2026-03-07 16:33:20]  mtime=0
[2026-03-07 16:33:20]  protocol_id=None
[2026-03-07 16:33:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 16:33:20]  replicas=None
[2026-03-07 16:33:20]  scope=mc23_13p6TeV
[2026-03-07 16:33:20]  status=None
[2026-03-07 16:33:20]  status_code=0
[2026-03-07 16:33:20]  storage_token=
[2026-03-07 16:33:20]  surl=/var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044702174/log.48958643._000678.job.log.tgz.1
[2026-03-07 16:33:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/44/log.48958643._000678.job.log.tgz.1
[2026-03-07 16:33:20]  workdir=None
[2026-03-07 16:33:20] ]
[2026-03-07 16:33:20] 2026-03-07 15:32:15,039 | INFO     | transferring file log.48958643._000678.job.log.tgz.1 from /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044702174/log.48958643._000678.job.log.tgz.1 to /var/lib/b
[2026-03-07 16:33:20] 2026-03-07 15:32:15,039 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044702174/log.48958643._000678.job.log.tgz.1 /var/lib/boinc/var/slot56/slots/8/lo
[2026-03-07 16:33:20] 2026-03-07 15:32:15,053 | INFO     | adding to output.list: log.48958643._000678.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/79/44/log.48958643._000678.job.log.tg
[2026-03-07 16:33:20] 2026-03-07 15:32:15,054 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 16:33:20] 2026-03-07 15:32:15,054 | INFO     | summary of transferred files:
[2026-03-07 16:33:20] 2026-03-07 15:32:15,054 | INFO     |  -- lfn=log.48958643._000678.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 16:33:20] 2026-03-07 15:32:15,054 | INFO     | stage-out finished correctly
[2026-03-07 16:33:20] 2026-03-07 15:32:15,553 | INFO     | time since job start (5591s) is within the limit (349056.0s)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,104 | INFO     | monitor loop #396: job 0:7044702174 is in state 'finished'
[2026-03-07 16:33:20] 2026-03-07 15:32:17,105 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,468 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 16:33:20] 2026-03-07 15:32:17,523 | INFO     | job 7044702174 has state=finished
[2026-03-07 16:33:20] 2026-03-07 15:32:17,523 | INFO     | preparing for final server update for job 7044702174 in state='finished'
[2026-03-07 16:33:20] 2026-03-07 15:32:17,524 | INFO     | reading metadata from: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044702174/jobReport.json
[2026-03-07 16:33:20] 2026-03-07 15:32:17,525 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot56/slots/8/workernode_map.json
[2026-03-07 16:33:20] 2026-03-07 15:32:17,525 | INFO     | this job has now completed (state=finished)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,525 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,525 | INFO     | log transfer has been attempted: DONE
[2026-03-07 16:33:20] 2026-03-07 15:32:17,525 | INFO     | job 7044702174 has finished - writing final server update
[2026-03-07 16:33:20] 2026-03-07 15:32:17,526 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_82252/.job.ad'
[2026-03-07 16:33:20] 2026-03-07 15:32:17,526 | INFO     | total number of processed events: 400 (read)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,543 | INFO     | using path: /var/lib/boinc/var/slot56/slots/8/PanDA_Pilot-7044702174/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,544 | INFO     | extracted standard info from prmon json
[2026-03-07 16:33:20] 2026-03-07 15:32:17,544 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 16:33:20] 2026-03-07 15:32:17,544 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 16:33:20] 2026-03-07 15:32:17,544 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 16:33:20] 2026-03-07 15:32:17,544 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 16:33:20] 2026-03-07 15:32:17,545 | INFO     | fitting pss+swap vs Time
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | sum of square deviations: 190403570.0
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | sum of deviations: 361040761.0
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | mean x: 1772894831.0
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | mean y: 2333413.776470588
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | intersect: -3359406594.3400073
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | chi2: 0.0001931900706521261
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | current memory leak: 1.90 B/s (using 85 data points, chi2=0.00)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | could have reported an average CPU frequency of 3629 MHz (7 samples)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | ..............................
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | . Timing measurements:
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | . get job = 0 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | . initial setup = 4 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,546 | INFO     | . payload setup = 4 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,547 | INFO     | . stage-in = 0 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,547 | INFO     | . payload execution = 5571 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,547 | INFO     | . stage-out = 0 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,547 | INFO     | . log creation = 0 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,547 | INFO     | ..............................
[2026-03-07 16:33:20] 2026-03-07 15:32:17,564 | INFO     | time since job start (5593s) is within the limit (349056.0s)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,595 | INFO     | 
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | job summary report
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | --------------------------------------------------
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | PanDA job id: 7044702174
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | task id: 48958643
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | errors: (none)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | pilot state: finished 
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | transexitcode: 0
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | exeerrorcode: 0
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | exeerrordiag: 
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | exitcode: 0
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | exitmsg: OK
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | cpuconsumptiontime: 21047 s
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | nevents: 400
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | neventsw: 0
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | pid: 322816
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | pgrp: 322816
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | corecount: 4
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | event service: False
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | sizes: {0: 2295786, 11: 2295786, 5579: 2322504, 5580: 2331524, 5582: 2331774}
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | --------------------------------------------------
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | 
[2026-03-07 16:33:20] 2026-03-07 15:32:17,596 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot56/slots/8
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,616 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | job 7044702174 has completed (purged errors)
[2026-03-07 16:33:20] 2026-03-07 15:32:17,617 | INFO     | overall cleanup function is called
[2026-03-07 16:33:20] 2026-03-07 15:32:18,623 | INFO     | --- collectZombieJob: --- 10, [322816]
[2026-03-07 16:33:20] 2026-03-07 15:32:18,624 | INFO     | zombie collector waiting for pid 322816
[2026-03-07 16:33:20] 2026-03-07 15:32:18,624 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 16:33:20] 2026-03-07 15:32:18,624 | INFO     | collected zombie processes
[2026-03-07 16:33:20] 2026-03-07 15:32:18,624 | INFO     | will attempt to kill all subprocesses of pid=322816
[2026-03-07 16:33:20] 2026-03-07 15:32:19,026 | INFO     | process IDs to be killed: [322816] (in reverse order)
[2026-03-07 16:33:20] 2026-03-07 15:32:19,242 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 16:33:20] 2026-03-07 15:32:19,242 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 16:33:20] 2026-03-07 15:32:19,269 | INFO     | did not find any defunct processes belonging to 322816
[2026-03-07 16:33:20] 2026-03-07 15:32:19,295 | INFO     | did not find any defunct processes belonging to 322816
[2026-03-07 16:33:20] 2026-03-07 15:32:19,296 | INFO     | ready for new job
[2026-03-07 16:33:20] 2026-03-07 15:32:19,296 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 16:33:20] 2026-03-07 15:32:19,297 | INFO     | **************************************
[2026-03-07 16:33:20] 2026-03-07 15:32:19,298 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 16:33:20] 2026-03-07 15:32:19,298 | INFO     | **************************************
[2026-03-07 16:33:20] 2026-03-07 15:32:19,298 | INFO     | 
[2026-03-07 16:33:20] 2026-03-07 15:32:19,304 | INFO     | architecture information:
[2026-03-07 16:33:20] 2026-03-07 15:32:19,304 | INFO     | executing command: cat /etc/os-release
[2026-03-07 16:33:20] 2026-03-07 15:32:19,318 | INFO     | cat /etc/os-release:
[2026-03-07 16:33:20] NAME="CentOS Linux"
[2026-03-07 16:33:20] VERSION="7 (Core)"
[2026-03-07 16:33:20] ID="centos"
[2026-03-07 16:33:20] ID_LIKE="rhel fedora"
[2026-03-07 16:33:20] VERSION_ID="7"
[2026-03-07 16:33:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 16:33:20] ANSI_COLOR="0;31"
[2026-03-07 16:33:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 16:33:20] HOME_URL="https://www.centos.org/"
[2026-03-07 16:33:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 16:33:20] 
[2026-03-07 16:33:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 16:33:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 16:33:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 16:33:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 16:33:20] 
[2026-03-07 16:33:20] 2026-03-07 15:32:19,318 | INFO     | **************************************
[2026-03-07 16:33:20] 2026-03-07 15:32:19,820 | INFO     | executing command: df -mP /var/lib/boinc/var/slot56/slots/8
[2026-03-07 16:33:20] 2026-03-07 15:32:19,834 | INFO     | sufficient remaining disk space (20473446400 B)
[2026-03-07 16:33:20] 2026-03-07 15:32:19,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 16:33:20] 2026-03-07 15:32:19,835 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 16:33:20] 2026-03-07 15:32:19,835 | INFO     | update_server=False
[2026-03-07 16:33:20] 2026-03-07 15:32:19,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 16:33:20] 2026-03-07 15:32:19,835 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 16:33:20] 2026-03-07 15:32:20,034 | INFO     | all job control threads have been joined
[2026-03-07 16:33:20] 2026-03-07 15:32:20,395 | INFO     | all data control threads have been joined
[2026-03-07 16:33:20] 2026-03-07 15:32:20,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 16:33:20] 2026-03-07 15:32:20,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:33:20] 2026-03-07 15:32:20,613 | INFO     | aborting loop
[2026-03-07 16:33:20] 2026-03-07 15:32:20,718 | INFO     | all payload control threads have been joined
[2026-03-07 16:33:20] 2026-03-07 15:32:20,840 | INFO     | [job] retrieve thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:20,946 | INFO     | [payload] failed_post thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:20,986 | INFO     | [job] validate thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,039 | INFO     | [job] control thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,302 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,369 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,400 | INFO     | [data] control thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,543 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,617 | INFO     | [job] job monitor thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,724 | INFO     | [payload] control thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,887 | INFO     | [data] copytool_in thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:21,994 | INFO     | [payload] validate_post thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:22,604 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:33:20] 2026-03-07 15:32:22,616 | INFO     | [data] copytool_out thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:23,609 | INFO     | [job] queue monitor thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:23,840 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:29,981 | INFO     | job.realtimelogging is not enabled
[2026-03-07 16:33:20] 2026-03-07 15:32:30,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 16:33:20] 2026-03-07 15:32:51,143 | INFO     | PID=302373 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 16:33:20] 2026-03-07 15:32:51,143 | INFO     | .. there are 53 such processes running
[2026-03-07 16:33:20] 2026-03-07 15:32:51,144 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 16:33:20] 2026-03-07 15:32:51,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 16:33:20] 2026-03-07 15:32:51,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 16:33:20] 2026-03-07 15:33:13,123 | INFO     | [monitor] cgroup control has ended
[2026-03-07 16:33:20] 2026-03-07 15:33:15,052 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23224326711104)>', '<ExcThread(monitor, started 23224022714112)>']
[2026-03-07 16:33:20] 2026-03-07 15:33:15,263 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 16:33:20] 2026-03-07 15:33:15,264 | INFO     | [monitor] control thread has ended
[2026-03-07 16:33:20] 2026-03-07 15:33:20,077 | INFO     | all workflow threads have been joined
[2026-03-07 16:33:20] 2026-03-07 15:33:20,078 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 16:33:20] 2026-03-07 15:33:20,078 | INFO     | traces error code: 0
[2026-03-07 16:33:20] 2026-03-07 15:33:20,078 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 16:33:20] 2026-03-07 15:33:20,194 [wrapper] ==== pilot stdout END ====
[2026-03-07 16:33:20] 2026-03-07 15:33:20,197 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 16:33:20] 2026-03-07 15:33:20,199 [wrapper] pilotpid: 302373
[2026-03-07 16:33:20] 2026-03-07 15:33:20,201 [wrapper] Pilot exit status: 0
[2026-03-07 16:33:20] 2026-03-07 15:33:20,208 [wrapper] pandaids: 7044702174
[2026-03-07 16:33:20] 2026-03-07 15:33:20,324 [wrapper] cleanup supervisor_pilot 1295661 302374
[2026-03-07 16:33:20] 2026-03-07 15:33:20,326 [wrapper] Test setup, not cleaning
[2026-03-07 16:33:20] 2026-03-07 15:33:20,329 [wrapper] apfmon messages muted
[2026-03-07 16:33:20] 2026-03-07 15:33:20,331 [wrapper] ==== wrapper stdout END ====
[2026-03-07 16:33:20] 2026-03-07 15:33:20,333 [wrapper] ==== wrapper stderr END ====
[2026-03-07 16:33:20]  *** Error codes and diagnostics ***
[2026-03-07 16:33:20]     "exeErrorCode": 0,
[2026-03-07 16:33:20]     "exeErrorDiag": "",
[2026-03-07 16:33:20]     "pilotErrorCode": 0,
[2026-03-07 16:33:20]     "pilotErrorDiag": "",
[2026-03-07 16:33:20]  *** Listing of results directory ***
[2026-03-07 16:33:20] total 444980
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc    584627 Mar  7 07:32 pilot3.tar.gz
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc      5111 Mar  7 08:03 queuedata.json
[2026-03-07 16:33:20] -rwx------. 1 boinc boinc     36322 Mar  7 08:03 runpilot2-wrapper.sh
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc       100 Mar  7 14:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 16:33:20] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 14:58 run_atlas
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc       105 Mar  7 14:58 job.xml
[2026-03-07 16:33:20] -rw-r--r--. 2 boinc boinc 264695948 Mar  7 14:58 EVNT.48958641._000028.pool.root.1
[2026-03-07 16:33:20] drwxrwx--x. 2 boinc boinc      4096 Mar  7 14:58 shared
[2026-03-07 16:33:20] -rw-r--r--. 2 boinc boinc    597942 Mar  7 14:58 input.tar.gz
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc      6701 Mar  7 14:58 init_data.xml
[2026-03-07 16:33:20] -rw-r--r--. 2 boinc boinc     15845 Mar  7 14:58 start_atlas.sh
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc         0 Mar  7 14:58 boinc_lockfile
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc      2543 Mar  7 14:58 pandaJob.out
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc    999177 Mar  7 14:58 agis_schedconf.cvmfs.json
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc   1521291 Mar  7 14:59 agis_ddmendpoints.agis.ALL.json
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc       444 Mar  7 14:59 workernode_map.json
[2026-03-07 16:33:20] drwx------. 5 boinc boinc      4096 Mar  7 14:59 pilot3
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc 184888003 Mar  7 16:31 HITS.48958643._000678.pool.root.1
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc       529 Mar  7 16:31 boinc_task_state.xml
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc      1031 Mar  7 16:32 memory_monitor_summary.json
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc    265591 Mar  7 16:32 log.48958643._000678.job.log.tgz.1
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc      6347 Mar  7 16:32 heartbeat.json
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc        95 Mar  7 16:32 pilot_heartbeat.json
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc        27 Mar  7 16:32 wrapper_checkpoint.txt
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc      8192 Mar  7 16:32 boinc_mmap_file
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc      4900 Mar  7 16:33 pilotlog.txt
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc    806827 Mar  7 16:33 log.48958643._000678.job.log.1
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc       357 Mar  7 16:33 output.list
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc       620 Mar  7 16:33 runtime_log
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc   1085440 Mar  7 16:33 result.tar.gz
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc      9204 Mar  7 16:33 runtime_log.err
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc       663 Mar  7 16:33 NWuKDmes0I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmT2ULDmFckQgm.diag
[2026-03-07 16:33:20] -rw-r--r--. 1 boinc boinc     21196 Mar  7 16:33 stderr.txt
[2026-03-07 16:33:20] HITS file was successfully produced:
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc 184888003 Mar  7 16:31 shared/HITS.pool.root.1
[2026-03-07 16:33:20]  *** Contents of shared directory: ***
[2026-03-07 16:33:20] total 440720
[2026-03-07 16:33:20] -rw-r--r--. 2 boinc boinc 264695948 Mar  7 14:58 ATLAS.root_0
[2026-03-07 16:33:20] -rw-r--r--. 2 boinc boinc    597942 Mar  7 14:58 input.tar.gz
[2026-03-07 16:33:20] -rw-r--r--. 2 boinc boinc     15845 Mar  7 14:58 start_atlas.sh
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc 184888003 Mar  7 16:31 HITS.pool.root.1
[2026-03-07 16:33:20] -rw-------. 1 boinc boinc   1085440 Mar  7 16:33 result.tar.gz
16:33:21 (292163): run_atlas exited; CPU time 21277.339305
16:33:21 (292163): called boinc_finish(0)

</stderr_txt>
]]>

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