Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
05:49:32 (2532229): wrapper (7.7.26015): starting
05:49:32 (2532229): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 05:49:32] Arguments: --nthreads 4
[2026-03-07 05:49:32] Threads: 4
[2026-03-07 05:49:32] Checking for CVMFS
[2026-03-07 05:49:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 05:49:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 05:49:34] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 05:49:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 05:49:34] 2.13.3.0 9162 6996 51180 156997 2 50 3801600 4096001 2748 130560 2 5911550 99.991 243673 74 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-07 05:49:34] CVMFS is ok
[2026-03-07 05:49:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 05:49:34] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-07 05:49:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-07 05:49:34] Further information can be found at the LHC@home message board.
[2026-03-07 05:49:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 05:49:34] Checking for apptainer binary...
[2026-03-07 05:49:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 05:49:34] Running /usr/bin/apptainer --version
[2026-03-07 05:49:34] apptainer version 1.4.5
[2026-03-07 05:49:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 05:49:35] SETI64-Ubuntu
[2026-03-07 05:49:35] apptainer works
[2026-03-07 05:49:35] Set ATHENA_PROC_NUMBER=4
[2026-03-07 05:49:35] Set ATHENA_CORE_NUMBER=4
[2026-03-07 05:49:35] Starting ATLAS job with PandaID=7044700021
[2026-03-07 05:49:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/87 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 08:30:17]  *** The last 200 lines of the pilot log: ***
[2026-03-07 08:30:17] 2026-03-07 13:29:24,470 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 08:30:17] 2026-03-07 13:29:24,611 | INFO     | job 7044700021 has state=finished
[2026-03-07 08:30:17] 2026-03-07 13:29:24,611 | INFO     | preparing for final server update for job 7044700021 in state='finished'
[2026-03-07 08:30:17] 2026-03-07 13:29:24,612 | INFO     | reading metadata from: /home/whitlerd/Desktop/BOINC/slots/87/PanDA_Pilot-7044700021/jobReport.json
[2026-03-07 08:30:17] 2026-03-07 13:29:24,614 | INFO     | added worker_node to metadata from /home/whitlerd/Desktop/BOINC/slots/87/workernode_map.json
[2026-03-07 08:30:17] 2026-03-07 13:29:24,614 | INFO     | this job has now completed (state=finished)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,614 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,615 | INFO     | log transfer has been attempted: DONE
[2026-03-07 08:30:17] 2026-03-07 13:29:24,615 | INFO     | job 7044700021 has finished - writing final server update
[2026-03-07 08:30:17] 2026-03-07 13:29:24,615 | INFO     | total number of processed events: 400 (read)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,640 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/87/PanDA_Pilot-7044700021/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,641 | INFO     | extracted standard info from prmon json
[2026-03-07 08:30:17] 2026-03-07 13:29:24,641 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 08:30:17] 2026-03-07 13:29:24,641 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 08:30:17] 2026-03-07 13:29:24,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 08:30:17] 2026-03-07 13:29:24,641 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 08:30:17] 2026-03-07 13:29:24,644 | INFO     | fitting pss+swap vs Time
[2026-03-07 08:30:17] 2026-03-07 13:29:24,645 | INFO     | sum of square deviations: 1199940638.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,646 | INFO     | sum of deviations: -14497386452.999983
[2026-03-07 08:30:17] 2026-03-07 13:29:24,646 | INFO     | mean x: 1772885378.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,646 | INFO     | mean y: 2365681.6624203823
[2026-03-07 08:30:17] 2026-03-07 13:29:24,646 | INFO     | intersect: 21421928989.8758
[2026-03-07 08:30:17] 2026-03-07 13:29:24,646 | INFO     | chi2: 1.603415102962486
[2026-03-07 08:30:17] 2026-03-07 13:29:24,647 | INFO     | sum of square deviations: 1088905998.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,648 | INFO     | sum of deviations: -13947804604.5
[2026-03-07 08:30:17] 2026-03-07 13:29:24,648 | INFO     | mean x: 1772885225.5
[2026-03-07 08:30:17] 2026-03-07 13:29:24,648 | INFO     | mean y: 2366442.914473684
[2026-03-07 08:30:17] 2026-03-07 13:29:24,648 | INFO     | intersect: 22711265794.095127
[2026-03-07 08:30:17] 2026-03-07 13:29:24,648 | INFO     | chi2: 1.5993090172748046
[2026-03-07 08:30:17] 2026-03-07 13:29:24,648 | INFO     | current chi2=1.5993090172748046 (change=0.2560837602249656 %)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,648 | INFO     | right removable region: 151
[2026-03-07 08:30:17] 2026-03-07 13:29:24,649 | INFO     | sum of square deviations: 1088905998.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,649 | INFO     | sum of deviations: -31852785288.000004
[2026-03-07 08:30:17] 2026-03-07 13:29:24,650 | INFO     | mean x: 1772885530.5
[2026-03-07 08:30:17] 2026-03-07 13:29:24,650 | INFO     | mean y: 2389014.3552631577
[2026-03-07 08:30:17] 2026-03-07 13:29:24,650 | INFO     | intersect: 51863010819.12053
[2026-03-07 08:30:17] 2026-03-07 13:29:24,650 | INFO     | chi2: 0.2840793792832851
[2026-03-07 08:30:17] 2026-03-07 13:29:24,650 | INFO     | current chi2=0.2840793792832851 (change=82.28285496635168 %)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,650 | INFO     | sum of square deviations: 984941258.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,651 | INFO     | sum of deviations: -24997968787.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,651 | INFO     | mean x: 1772885683.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,651 | INFO     | mean y: 2378946.6258503404
[2026-03-07 08:30:17] 2026-03-07 13:29:24,651 | INFO     | intersect: 44998504965.9028
[2026-03-07 08:30:17] 2026-03-07 13:29:24,652 | INFO     | chi2: 0.26094498466286636
[2026-03-07 08:30:17] 2026-03-07 13:29:24,652 | INFO     | current chi2=0.26094498466286636 (change=8.143637415283496 %)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,652 | INFO     | left removable region: 20
[2026-03-07 08:30:17] 2026-03-07 13:29:24,652 | INFO     | sum of square deviations: 697054930.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,653 | INFO     | sum of deviations: -9122644062.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,653 | INFO     | mean x: 1772885805.0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,653 | INFO     | mean y: 2354139.7251908397
[2026-03-07 08:30:17] 2026-03-07 13:29:24,653 | INFO     | intersect: 23204838571.744545
[2026-03-07 08:30:17] 2026-03-07 13:29:24,653 | INFO     | chi2: 0.13696510370117693
[2026-03-07 08:30:17] 2026-03-07 13:29:24,654 | INFO     | current memory leak: -13.09 B/s (using 131 data points, chi2=0.14)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,654 | INFO     | could have reported an average CPU frequency of 2473 MHz (9 samples)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,654 | INFO     | ..............................
[2026-03-07 08:30:17] 2026-03-07 13:29:24,654 | INFO     | . Timing measurements:
[2026-03-07 08:30:17] 2026-03-07 13:29:24,654 | INFO     | . get job = 0 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,654 | INFO     | . initial setup = 8 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,654 | INFO     | . payload setup = 7 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,655 | INFO     | . stage-in = 0 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,655 | INFO     | . payload execution = 9545 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,655 | INFO     | . stage-out = 0 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,655 | INFO     | . log creation = 0 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,655 | INFO     | ..............................
[2026-03-07 08:30:17] 2026-03-07 13:29:24,747 | INFO     | 
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | job summary report
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | --------------------------------------------------
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | PanDA job id: 7044700021
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | task id: 48958643
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | errors: (none)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | pilot state: finished 
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | transexitcode: 0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | exeerrorcode: 0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | exeerrordiag: 
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | exitcode: 0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,748 | INFO     | exitmsg: OK
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | cpuconsumptiontime: 36909 s
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | nevents: 400
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | neventsw: 0
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | pid: 2541773
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | pgrp: 2541773
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | corecount: 4
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | event service: False
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | sizes: {0: 2295359, 1: 2295820, 11: 2295820, 9556: 2324247, 9557: 2333533}
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | --------------------------------------------------
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | 
[2026-03-07 08:30:17] 2026-03-07 13:29:24,749 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 08:30:17] 2026-03-07 13:29:24,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,773 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,774 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,775 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 08:30:17] 2026-03-07 13:29:24,775 | INFO     | job 7044700021 has completed (purged errors)
[2026-03-07 08:30:17] 2026-03-07 13:29:24,775 | INFO     | overall cleanup function is called
[2026-03-07 08:30:17] 2026-03-07 13:29:25,784 | INFO     | --- collectZombieJob: --- 10, [2541773]
[2026-03-07 08:30:17] 2026-03-07 13:29:25,784 | INFO     | zombie collector waiting for pid 2541773
[2026-03-07 08:30:17] 2026-03-07 13:29:25,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 08:30:17] 2026-03-07 13:29:25,785 | INFO     | collected zombie processes
[2026-03-07 08:30:17] 2026-03-07 13:29:25,785 | INFO     | will attempt to kill all subprocesses of pid=2541773
[2026-03-07 08:30:17] 2026-03-07 13:29:26,237 | INFO     | process IDs to be killed: [2541773] (in reverse order)
[2026-03-07 08:30:17] 2026-03-07 13:29:26,381 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 08:30:17] 2026-03-07 13:29:26,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 08:30:17] 2026-03-07 13:29:26,397 | INFO     | did not find any defunct processes belonging to 2541773
[2026-03-07 08:30:17] 2026-03-07 13:29:26,412 | INFO     | did not find any defunct processes belonging to 2541773
[2026-03-07 08:30:17] 2026-03-07 13:29:26,413 | INFO     | ready for new job
[2026-03-07 08:30:17] 2026-03-07 13:29:26,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 08:30:17] 2026-03-07 13:29:26,415 | INFO     | **************************************
[2026-03-07 08:30:17] 2026-03-07 13:29:26,415 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 08:30:17] 2026-03-07 13:29:26,415 | INFO     | **************************************
[2026-03-07 08:30:17] 2026-03-07 13:29:26,415 | INFO     | 
[2026-03-07 08:30:17] 2026-03-07 13:29:26,424 | INFO     | architecture information:
[2026-03-07 08:30:17] 2026-03-07 13:29:26,424 | INFO     | executing command: cat /etc/os-release
[2026-03-07 08:30:17] 2026-03-07 13:29:26,446 | INFO     | cat /etc/os-release:
[2026-03-07 08:30:17] NAME="CentOS Linux"
[2026-03-07 08:30:17] VERSION="7 (Core)"
[2026-03-07 08:30:17] ID="centos"
[2026-03-07 08:30:17] ID_LIKE="rhel fedora"
[2026-03-07 08:30:17] VERSION_ID="7"
[2026-03-07 08:30:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 08:30:17] ANSI_COLOR="0;31"
[2026-03-07 08:30:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 08:30:17] HOME_URL="https://www.centos.org/"
[2026-03-07 08:30:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 08:30:17] 
[2026-03-07 08:30:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 08:30:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 08:30:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 08:30:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 08:30:17] 
[2026-03-07 08:30:17] 2026-03-07 13:29:26,446 | INFO     | **************************************
[2026-03-07 08:30:17] 2026-03-07 13:29:26,949 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/87
[2026-03-07 08:30:17] 2026-03-07 13:29:26,970 | INFO     | sufficient remaining disk space (379525791744 B)
[2026-03-07 08:30:17] 2026-03-07 13:29:26,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 08:30:17] 2026-03-07 13:29:26,970 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 08:30:17] 2026-03-07 13:29:26,970 | INFO     | update_server=False
[2026-03-07 08:30:17] 2026-03-07 13:29:26,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 08:30:17] 2026-03-07 13:29:26,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 08:30:17] 2026-03-07 13:29:27,046 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:30:17] 2026-03-07 13:29:27,047 | INFO     | aborting loop
[2026-03-07 08:30:17] 2026-03-07 13:29:27,204 | INFO     | all data control threads have been joined
[2026-03-07 08:30:17] 2026-03-07 13:29:27,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 08:30:17] 2026-03-07 13:29:27,976 | INFO     | [job] retrieve thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:28,048 | INFO     | [job] job monitor thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:28,060 | INFO     | all job control threads have been joined
[2026-03-07 08:30:17] 2026-03-07 13:29:28,095 | INFO     | all payload control threads have been joined
[2026-03-07 08:30:17] 2026-03-07 13:29:28,198 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:28,209 | INFO     | [data] control thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:28,346 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:28,588 | INFO     | [payload] failed_post thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:28,773 | INFO     | [data] copytool_in thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:29,066 | INFO     | [job] control thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:29,097 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:29,100 | INFO     | [payload] control thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:29,289 | INFO     | job.realtimelogging is not enabled
[2026-03-07 08:30:17] 2026-03-07 13:29:29,330 | INFO     | [job] validate thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:29,447 | INFO     | [payload] validate_post thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:29,482 | INFO     | [data] copytool_out thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:29,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:30:17] 2026-03-07 13:29:30,296 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:30,765 | INFO     | [job] queue monitor thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:30,976 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 08:30:17] 2026-03-07 13:29:58,077 | INFO     | PID=2536788 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 08:30:17] 2026-03-07 13:29:58,077 | INFO     | .. there are 4 such processes running
[2026-03-07 08:30:17] 2026-03-07 13:29:58,077 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 08:30:17] 2026-03-07 13:29:58,078 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 08:30:17] 2026-03-07 13:29:58,078 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 08:30:17] 2026-03-07 13:30:10,262 | INFO     | [monitor] cgroup control has ended
[2026-03-07 08:30:17] 2026-03-07 13:30:12,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125061119899456)>', '<ExcThread(monitor, started 125060018845440)>']
[2026-03-07 08:30:17] 2026-03-07 13:30:13,138 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 08:30:17] 2026-03-07 13:30:13,138 | INFO     | [monitor] control thread has ended
[2026-03-07 08:30:17] 2026-03-07 13:30:17,215 | INFO     | all workflow threads have been joined
[2026-03-07 08:30:17] 2026-03-07 13:30:17,215 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 08:30:17] 2026-03-07 13:30:17,216 | INFO     | traces error code: 0
[2026-03-07 08:30:17] 2026-03-07 13:30:17,216 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 08:30:17] 2026-03-07 13:30:17,363 [wrapper] ==== pilot stdout END ====
[2026-03-07 08:30:17] 2026-03-07 13:30:17,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 08:30:17] 2026-03-07 13:30:17,371 [wrapper] pilotpid: 2536788
[2026-03-07 08:30:17] 2026-03-07 13:30:17,375 [wrapper] Pilot exit status: 0
[2026-03-07 08:30:17] 2026-03-07 13:30:17,394 [wrapper] pandaids: 7044700021
[2026-03-07 08:30:17] 2026-03-07 13:30:17,508 [wrapper] cleanup supervisor_pilot 2599510 2536789
[2026-03-07 08:30:17] 2026-03-07 13:30:17,513 [wrapper] Test setup, not cleaning
[2026-03-07 08:30:17] 2026-03-07 13:30:17,517 [wrapper] apfmon messages muted
[2026-03-07 08:30:17] 2026-03-07 13:30:17,520 [wrapper] ==== wrapper stdout END ====
[2026-03-07 08:30:17] 2026-03-07 13:30:17,524 [wrapper] ==== wrapper stderr END ====
[2026-03-07 08:30:17]  *** Error codes and diagnostics ***
[2026-03-07 08:30:17]     "exeErrorCode": 0,
[2026-03-07 08:30:17]     "exeErrorDiag": "",
[2026-03-07 08:30:17]     "pilotErrorCode": 0,
[2026-03-07 08:30:17]     "pilotErrorDiag": "",
[2026-03-07 08:30:17]  *** Listing of results directory ***
[2026-03-07 08:30:17] total 442040
[2026-03-07 08:30:17] -rw-r--r-- 1 whitlerd whitlerd    584627 Mar  7 01:32 pilot3.tar.gz
[2026-03-07 08:30:17] -rw-r--r-- 1 whitlerd whitlerd      5111 Mar  7 02:03 queuedata.json
[2026-03-07 08:30:17] -rwx------ 1 whitlerd whitlerd     36322 Mar  7 02:03 runpilot2-wrapper.sh
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd       100 Mar  7 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 08:30:17] -rwxr-xr-x 1 whitlerd whitlerd      7986 Mar  7 05:49 run_atlas
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd       105 Mar  7 05:49 job.xml
[2026-03-07 08:30:17] -rw-r--r-- 2 whitlerd whitlerd 265843112 Mar  7 05:49 EVNT.48958641._000018.pool.root.1
[2026-03-07 08:30:17] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 05:49 start_atlas.sh
[2026-03-07 08:30:17] drwxrwx--x 2 whitlerd whitlerd      4096 Mar  7 05:49 shared
[2026-03-07 08:30:17] -rw-r--r-- 2 whitlerd whitlerd    597937 Mar  7 05:49 input.tar.gz
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd      9566 Mar  7 05:49 init_data.xml
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 05:49 boinc_setup_complete
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd         0 Mar  7 05:49 boinc_lockfile
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd      2544 Mar  7 05:49 pandaJob.out
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd    999169 Mar  7 05:49 agis_schedconf.cvmfs.json
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd   1521291 Mar  7 05:49 agis_ddmendpoints.agis.ALL.json
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd       424 Mar  7 05:49 workernode_map.json
[2026-03-07 08:30:17] drwx------ 5 whitlerd whitlerd      4096 Mar  7 05:49 pilot3
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd 179473855 Mar  7 08:28 HITS.48958643._000448.pool.root.1
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd       529 Mar  7 08:28 boinc_task_state.xml
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd        95 Mar  7 08:29 pilot_heartbeat.json
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd      1022 Mar  7 08:29 memory_monitor_summary.json
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd    347249 Mar  7 08:29 log.48958643._000448.job.log.tgz.1
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd      6283 Mar  7 08:29 heartbeat.json
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd        27 Mar  7 08:30 wrapper_checkpoint.txt
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd      8192 Mar  7 08:30 boinc_mmap_file
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd      4907 Mar  7 08:30 pilotlog.txt
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd   1348637 Mar  7 08:30 log.48958643._000448.job.log.1
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd       357 Mar  7 08:30 output.list
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd       620 Mar  7 08:30 runtime_log
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd   1710080 Mar  7 08:30 result.tar.gz
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd      9040 Mar  7 08:30 runtime_log.err
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd       648 Mar  7 08:30 Q2ULDmVs0I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmA1ULDmkBNiKn.diag
[2026-03-07 08:30:17] -rw-rw-r-- 1 whitlerd whitlerd     21347 Mar  7 08:30 stderr.txt
[2026-03-07 08:30:17] HITS file was successfully produced:
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd 179473855 Mar  7 08:28 shared/HITS.pool.root.1
[2026-03-07 08:30:17]  *** Contents of shared directory: ***
[2026-03-07 08:30:17] total 437164
[2026-03-07 08:30:17] -rw-r--r-- 2 whitlerd whitlerd 265843112 Mar  7 05:49 ATLAS.root_0
[2026-03-07 08:30:17] -rw-r--r-- 2 whitlerd whitlerd     15845 Mar  7 05:49 start_atlas.sh
[2026-03-07 08:30:17] -rw-r--r-- 2 whitlerd whitlerd    597937 Mar  7 05:49 input.tar.gz
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd 179473855 Mar  7 08:28 HITS.pool.root.1
[2026-03-07 08:30:17] -rw------- 1 whitlerd whitlerd   1710080 Mar  7 08:30 result.tar.gz
08:30:19 (2532229): run_atlas exited; CPU time 37397.589943
08:30:19 (2532229): called boinc_finish(0)

</stderr_txt>
]]>

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