Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:13:57 (23165): wrapper (7.7.26015): starting
19:13:57 (23165): wrapper: running run_atlas (--nthreads 8)
[2026-03-07 19:13:57] Arguments: --nthreads 8
[2026-03-07 19:13:57] Threads: 8
[2026-03-07 19:13:57] Checking for CVMFS
[2026-03-07 19:13:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 19:13:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 19:13:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 19:14:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 19:14:01] 2.11.2.0 10325 117840 132080 157009 2 119 25059789 25165824 1081 130560 155 34561485 99.848 24726686 915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-07 19:14:01] CVMFS is ok
[2026-03-07 19:14:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 19:14:01] Checking for apptainer binary...
[2026-03-07 19:14:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 19:14:01] Running /usr/bin/apptainer --version
[2026-03-07 19:14:01] apptainer version 1.3.2-1.el7
[2026-03-07 19:14:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 19:14:20] cg-vwn405.simple-grid.lan
[2026-03-07 19:14:20] apptainer works
[2026-03-07 19:14:21] Set ATHENA_PROC_NUMBER=8
[2026-03-07 19:14:21] Set ATHENA_CORE_NUMBER=8
[2026-03-07 19:14:21] Starting ATLAS job with PandaID=7039032089
[2026-03-07 19:14:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 23:29:23]  *** The last 200 lines of the pilot log: ***
[2026-03-07 23:29:23] 2026-03-07 22:28:12,540 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7039032089/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,541 | INFO     | extracted standard info from prmon json
[2026-03-07 23:29:23] 2026-03-07 22:28:12,541 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 23:29:23] 2026-03-07 22:28:12,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 23:29:23] 2026-03-07 22:28:12,541 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 23:29:23] 2026-03-07 22:28:12,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 23:29:23] 2026-03-07 22:28:12,547 | INFO     | fitting pss+swap vs Time
[2026-03-07 23:29:23] 2026-03-07 22:28:12,547 | INFO     | sum of square deviations: 4233158440.0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,549 | INFO     | sum of deviations: 81123667895.00002
[2026-03-07 23:29:23] 2026-03-07 22:28:12,550 | INFO     | mean x: 1772915208.0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,550 | INFO     | mean y: 2439403.230125523
[2026-03-07 23:29:23] 2026-03-07 22:28:12,550 | INFO     | intersect: -33973464541.387375
[2026-03-07 23:29:23] 2026-03-07 22:28:12,550 | INFO     | chi2: 7.820052443680449
[2026-03-07 23:29:23] 2026-03-07 22:28:12,551 | INFO     | sum of square deviations: 3972995422.5
[2026-03-07 23:29:23] 2026-03-07 22:28:12,553 | INFO     | sum of deviations: 94958427635.00003
[2026-03-07 23:29:23] 2026-03-07 22:28:12,553 | INFO     | mean x: 1772915055.5
[2026-03-07 23:29:23] 2026-03-07 22:28:12,553 | INFO     | mean y: 2447356.6324786325
[2026-03-07 23:29:23] 2026-03-07 22:28:12,554 | INFO     | intersect: -42371934714.70725
[2026-03-07 23:29:23] 2026-03-07 22:28:12,554 | INFO     | chi2: 7.125637760921411
[2026-03-07 23:29:23] 2026-03-07 22:28:12,554 | INFO     | current chi2=7.125637760921411 (change=8.87992360358413 %)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,554 | INFO     | right removable region: 233
[2026-03-07 23:29:23] 2026-03-07 22:28:12,555 | INFO     | sum of square deviations: 3972995422.5
[2026-03-07 23:29:23] 2026-03-07 22:28:12,557 | INFO     | sum of deviations: -1307013937.9999962
[2026-03-07 23:29:23] 2026-03-07 22:28:12,557 | INFO     | mean x: 1772915360.5
[2026-03-07 23:29:23] 2026-03-07 22:28:12,557 | INFO     | mean y: 2487681.717948718
[2026-03-07 23:29:23] 2026-03-07 22:28:12,557 | INFO     | intersect: 585731516.8215084
[2026-03-07 23:29:23] 2026-03-07 22:28:12,558 | INFO     | chi2: 2.9128831210889876
[2026-03-07 23:29:23] 2026-03-07 22:28:12,558 | INFO     | current chi2=2.9128831210889876 (change=62.75110503327953 %)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,558 | INFO     | sum of square deviations: 3723716330.0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,561 | INFO     | sum of deviations: -51236178166.99999
[2026-03-07 23:29:23] 2026-03-07 22:28:12,561 | INFO     | mean x: 1772915513.0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,561 | INFO     | mean y: 2518101.5414847163
[2026-03-07 23:29:23] 2026-03-07 22:28:12,561 | INFO     | intersect: 24396807851.079468
[2026-03-07 23:29:23] 2026-03-07 22:28:12,561 | INFO     | chi2: 1.0114119553717553
[2026-03-07 23:29:23] 2026-03-07 22:28:12,562 | INFO     | current chi2=1.0114119553717553 (change=65.27797672178359 %)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,562 | INFO     | sum of square deviations: 3485088600.0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,564 | INFO     | sum of deviations: -52791344222.5
[2026-03-07 23:29:23] 2026-03-07 22:28:12,564 | INFO     | mean x: 1772915665.5
[2026-03-07 23:29:23] 2026-03-07 22:28:12,564 | INFO     | mean y: 2519041.78125
[2026-03-07 23:29:23] 2026-03-07 22:28:12,564 | INFO     | intersect: 26858249818.575035
[2026-03-07 23:29:23] 2026-03-07 22:28:12,565 | INFO     | chi2: 0.9696144644924064
[2026-03-07 23:29:23] 2026-03-07 22:28:12,565 | INFO     | current chi2=0.9696144644924064 (change=4.132588176099402 %)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,565 | INFO     | left removable region: 30
[2026-03-07 23:29:23] 2026-03-07 22:28:12,566 | INFO     | sum of square deviations: 2593916542.0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,567 | INFO     | sum of deviations: -15317202602.000006
[2026-03-07 23:29:23] 2026-03-07 22:28:12,567 | INFO     | mean x: 1772915940.0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,568 | INFO     | mean y: 2513436.566502463
[2026-03-07 23:29:23] 2026-03-07 22:28:12,568 | INFO     | intersect: 10471667786.596968
[2026-03-07 23:29:23] 2026-03-07 22:28:12,568 | INFO     | chi2: 0.12100948814089177
[2026-03-07 23:29:23] 2026-03-07 22:28:12,574 | INFO     | current memory leak: -5.91 B/s (using 203 data points, chi2=0.12)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,574 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | ..............................
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | . Timing measurements:
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | . get job = 0 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | . initial setup = 113 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | . payload setup = 159 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | . stage-in = 0 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | . payload execution = 14671 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,575 | INFO     | . stage-out = 3 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,576 | INFO     | . log creation = 1 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,576 | INFO     | ..............................
[2026-03-07 23:29:23] 2026-03-07 22:28:12,792 | INFO     | 
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | job summary report
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | --------------------------------------------------
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | PanDA job id: 7039032089
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | task id: 48955010
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | errors: (none)
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | pilot state: finished 
[2026-03-07 23:29:23] 2026-03-07 22:28:12,793 | INFO     | transexitcode: 0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | exeerrorcode: 0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | exeerrordiag: 
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | exitcode: 0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | exitmsg: OK
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | cpuconsumptiontime: 53176 s
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | nevents: 400
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | neventsw: 0
[2026-03-07 23:29:23] 2026-03-07 22:28:12,794 | INFO     | pid: 31604
[2026-03-07 23:29:23] 2026-03-07 22:28:12,795 | INFO     | pgrp: 31604
[2026-03-07 23:29:23] 2026-03-07 22:28:12,795 | INFO     | corecount: 8
[2026-03-07 23:29:23] 2026-03-07 22:28:12,795 | INFO     | event service: False
[2026-03-07 23:29:23] 2026-03-07 22:28:12,795 | INFO     | sizes: {0: 2294662, 1: 2295720, 2: 2295808, 14834: 2326689, 14835: 2326688, 14839: 2335742, 14841: 2335926, 14842: 2336120}
[2026-03-07 23:29:23] 2026-03-07 22:28:12,795 | INFO     | --------------------------------------------------
[2026-03-07 23:29:23] 2026-03-07 22:28:12,795 | INFO     | 
[2026-03-07 23:29:23] 2026-03-07 22:28:12,795 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-07 23:29:23] 2026-03-07 22:28:12,878 | INFO     | PID=27153 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-07 23:29:23] 2026-03-07 22:28:12,878 | INFO     | .. there are 2 such processes running
[2026-03-07 23:29:23] 2026-03-07 22:28:13,402 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 23:29:23] 2026-03-07 22:28:13,405 | INFO     | job 7039032089 has completed (purged errors)
[2026-03-07 23:29:23] 2026-03-07 22:28:13,405 | INFO     | overall cleanup function is called
[2026-03-07 23:29:23] 2026-03-07 22:28:14,413 | INFO     | --- collectZombieJob: --- 10, [31604]
[2026-03-07 23:29:23] 2026-03-07 22:28:14,414 | INFO     | zombie collector waiting for pid 31604
[2026-03-07 23:29:23] 2026-03-07 22:28:14,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 23:29:23] 2026-03-07 22:28:14,414 | INFO     | collected zombie processes
[2026-03-07 23:29:23] 2026-03-07 22:28:14,414 | INFO     | will attempt to kill all subprocesses of pid=31604
[2026-03-07 23:29:23] 2026-03-07 22:28:14,513 | INFO     | process IDs to be killed: [31604] (in reverse order)
[2026-03-07 23:29:23] 2026-03-07 22:28:15,554 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 23:29:23] 2026-03-07 22:28:15,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 23:29:23] 2026-03-07 22:28:15,556 | INFO     | did not find any defunct processes belonging to 31604
[2026-03-07 23:29:23] 2026-03-07 22:28:15,558 | INFO     | did not find any defunct processes belonging to 31604
[2026-03-07 23:29:23] 2026-03-07 22:28:15,558 | INFO     | ready for new job
[2026-03-07 23:29:23] 2026-03-07 22:28:15,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 23:29:23] 2026-03-07 22:28:15,561 | INFO     | **************************************
[2026-03-07 23:29:23] 2026-03-07 22:28:15,561 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 23:29:23] 2026-03-07 22:28:15,561 | INFO     | **************************************
[2026-03-07 23:29:23] 2026-03-07 22:28:15,561 | INFO     | 
[2026-03-07 23:29:23] 2026-03-07 22:28:15,562 | INFO     | pilot is running in a VM
[2026-03-07 23:29:23] 2026-03-07 22:28:15,562 | INFO     | architecture information:
[2026-03-07 23:29:23] 2026-03-07 22:28:15,567 | INFO     | executing command: cat /etc/os-release
[2026-03-07 23:29:23] 2026-03-07 22:28:15,925 | INFO     | cat /etc/os-release:
[2026-03-07 23:29:23] NAME="CentOS Linux"
[2026-03-07 23:29:23] VERSION="7 (Core)"
[2026-03-07 23:29:23] ID="centos"
[2026-03-07 23:29:23] ID_LIKE="rhel fedora"
[2026-03-07 23:29:23] VERSION_ID="7"
[2026-03-07 23:29:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 23:29:23] ANSI_COLOR="0;31"
[2026-03-07 23:29:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 23:29:23] HOME_URL="https://www.centos.org/"
[2026-03-07 23:29:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 23:29:23] 
[2026-03-07 23:29:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 23:29:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 23:29:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 23:29:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 23:29:23] 
[2026-03-07 23:29:23] 2026-03-07 22:28:15,925 | INFO     | **************************************
[2026-03-07 23:29:23] 2026-03-07 22:28:16,429 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-07 23:29:23] 2026-03-07 22:28:16,673 | INFO     | sufficient remaining disk space (494063845376 B)
[2026-03-07 23:29:23] 2026-03-07 22:28:16,673 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 23:29:23] 2026-03-07 22:28:16,674 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 23:29:23] 2026-03-07 22:28:16,674 | INFO     | update_server=False
[2026-03-07 23:29:23] 2026-03-07 22:28:16,674 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 23:29:23] 2026-03-07 22:28:16,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:29:23] 2026-03-07 22:28:16,679 | INFO     | aborting loop
[2026-03-07 23:29:23] 2026-03-07 22:28:17,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 23:29:23] 2026-03-07 22:28:17,679 | INFO     | [job] retrieve thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:17,685 | INFO     | [job] job monitor thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:17,702 | INFO     | all data control threads have been joined
[2026-03-07 23:29:23] 2026-03-07 22:28:17,733 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:29:23] 2026-03-07 22:28:17,795 | INFO     | all payload control threads have been joined
[2026-03-07 23:29:23] 2026-03-07 22:28:17,865 | INFO     | [data] copytool_in thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:17,870 | INFO     | all job control threads have been joined
[2026-03-07 23:29:23] 2026-03-07 22:28:18,100 | INFO     | [job] validate thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,110 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 23:29:23] 2026-03-07 22:28:18,320 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,520 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,547 | INFO     | [payload] failed_post thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,708 | INFO     | [data] control thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,739 | INFO     | [job] queue monitor thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,801 | INFO     | [payload] control thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,824 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:18,876 | INFO     | [job] control thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:19,240 | INFO     | [payload] validate_post thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:20,117 | INFO     | [data] copytool_out thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:21,286 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:27,662 | INFO     | job.realtimelogging is not enabled
[2026-03-07 23:29:23] 2026-03-07 22:28:28,668 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 23:29:23] 2026-03-07 22:28:45,016 | INFO     | PID=27153 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-07 23:29:23] 2026-03-07 22:28:45,016 | INFO     | .. there are 2 such processes running
[2026-03-07 23:29:23] 2026-03-07 22:28:45,016 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 23:29:23] 2026-03-07 22:28:45,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 23:29:23] 2026-03-07 22:28:45,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 23:29:23] 2026-03-07 22:29:12,930 | INFO     | [monitor] cgroup control has ended
[2026-03-07 23:29:23] 2026-03-07 22:29:13,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435954816832)>', '<ExcThread(monitor, started 140435649435392)>']
[2026-03-07 23:29:23] 2026-03-07 22:29:13,184 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 23:29:23] 2026-03-07 22:29:13,185 | INFO     | [monitor] control thread has ended
[2026-03-07 23:29:23] 2026-03-07 22:29:18,080 | INFO     | all workflow threads have been joined
[2026-03-07 23:29:23] 2026-03-07 22:29:18,081 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 23:29:23] 2026-03-07 22:29:18,081 | INFO     | traces error code: 0
[2026-03-07 23:29:23] 2026-03-07 22:29:18,081 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 23:29:23] 2026-03-07 22:29:18,464 [wrapper] ==== pilot stdout END ====
[2026-03-07 23:29:23] 2026-03-07 22:29:18,590 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 23:29:23] 2026-03-07 22:29:18,699 [wrapper] pilotpid: 27153
[2026-03-07 23:29:23] 2026-03-07 22:29:18,808 [wrapper] Pilot exit status: 0
[2026-03-07 23:29:23] 2026-03-07 22:29:19,360 [wrapper] pandaids: 7039032089
[2026-03-07 23:29:23] 2026-03-07 22:29:20,501 [wrapper] cleanup supervisor_pilot  5826 27154
[2026-03-07 23:29:23] 2026-03-07 22:29:20,600 [wrapper] Test setup, not cleaning
[2026-03-07 23:29:23] 2026-03-07 22:29:20,706 [wrapper] apfmon messages muted
[2026-03-07 23:29:23] 2026-03-07 22:29:20,802 [wrapper] ==== wrapper stdout END ====
[2026-03-07 23:29:23] 2026-03-07 22:29:20,877 [wrapper] ==== wrapper stderr END ====
[2026-03-07 23:29:23]  *** Error codes and diagnostics ***
[2026-03-07 23:29:23]     "exeErrorCode": 0,
[2026-03-07 23:29:23]     "exeErrorDiag": "",
[2026-03-07 23:29:23]     "pilotErrorCode": 0,
[2026-03-07 23:29:23]     "pilotErrorDiag": "",
[2026-03-07 23:29:23]  *** Listing of results directory ***
[2026-03-07 23:29:23] total 619240
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc    584627 Mar  7 07:32 pilot3.tar.gz
[2026-03-07 23:29:23] -rwx------. 1 boinc boinc     36322 Mar  7 07:34 runpilot2-wrapper.sh
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc      5111 Mar  7 07:34 queuedata.json
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc       100 Mar  7 19:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 23:29:23] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 19:13 run_atlas
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc       105 Mar  7 19:13 job.xml
[2026-03-07 23:29:23] -rw-r--r--. 2 boinc boinc 436675610 Mar  7 19:13 EVNT.46701403._001189.pool.root.1
[2026-03-07 23:29:23] drwxrwx--x. 2 boinc boinc        68 Mar  7 19:13 shared
[2026-03-07 23:29:23] -rw-r--r--. 2 boinc boinc    597951 Mar  7 19:13 input.tar.gz
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc      6391 Mar  7 19:13 init_data.xml
[2026-03-07 23:29:23] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:13 start_atlas.sh
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc         0 Mar  7 19:13 boinc_lockfile
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc      2562 Mar  7 19:14 pandaJob.out
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc       415 Mar  7 19:20 workernode_map.json
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc    999177 Mar  7 19:20 agis_schedconf.cvmfs.json
[2026-03-07 23:29:23] drwx------. 5 boinc boinc      4096 Mar  7 19:20 pilot3
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc 188392532 Mar  7 23:26 HITS.48955010._009414.pool.root.1
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc       531 Mar  7 23:27 boinc_task_state.xml
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc        95 Mar  7 23:27 pilot_heartbeat.json
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc      1024 Mar  7 23:28 memory_monitor_summary.json
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc   1521291 Mar  7 23:28 agis_ddmendpoints.agis.ALL.json
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc    467499 Mar  7 23:28 log.48955010._009414.job.log.tgz.1
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc      6322 Mar  7 23:28 heartbeat.json
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc      8192 Mar  7 23:29 boinc_mmap_file
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc        28 Mar  7 23:29 wrapper_checkpoint.txt
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc      4952 Mar  7 23:29 pilotlog.txt
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc   2087512 Mar  7 23:29 log.48955010._009414.job.log.1
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc       357 Mar  7 23:29 output.list
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc       620 Mar  7 23:29 runtime_log
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc   2570240 Mar  7 23:29 result.tar.gz
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc       656 Mar  7 23:29 V3KODmuP0I9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHxULDmmO0qAn.diag
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc      8816 Mar  7 23:29 runtime_log.err
[2026-03-07 23:29:23] -rw-r--r--. 1 boinc boinc     20563 Mar  7 23:29 stderr.txt
[2026-03-07 23:29:23] HITS file was successfully produced:
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc 188392532 Mar  7 23:26 shared/HITS.pool.root.1
[2026-03-07 23:29:23]  *** Contents of shared directory: ***
[2026-03-07 23:29:23] total 613536
[2026-03-07 23:29:23] -rw-r--r--. 2 boinc boinc 436675610 Mar  7 19:13 ATLAS.root_0
[2026-03-07 23:29:23] -rw-r--r--. 2 boinc boinc    597951 Mar  7 19:13 input.tar.gz
[2026-03-07 23:29:23] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:13 start_atlas.sh
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc 188392532 Mar  7 23:26 HITS.pool.root.1
[2026-03-07 23:29:23] -rw-------. 1 boinc boinc   2570240 Mar  7 23:29 result.tar.gz
23:29:25 (23165): run_atlas exited; CPU time 53340.942606
23:29:25 (23165): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN