Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-07 18:41:40 (12224): vboxwrapper version 26210
2026-03-07 18:41:40 (12224): BOINC client version: 8.2.8
2026-03-07 18:41:41 (12224): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-03-07 18:41:41 (12224): Successfully copied 'init_data.xml' to the shared directory.
2026-03-07 18:41:41 (12224): Create VM. (boinc_5034e64727a93f5a, slot#1)
2026-03-07 18:41:42 (12224): Setting Memory Size for VM. (4400MB)
2026-03-07 18:41:42 (12224): Setting CPU Count for VM. (4)
2026-03-07 18:41:42 (12224): Setting Chipset Options for VM.
2026-03-07 18:41:43 (12224): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-07 18:41:43 (12224): Setting Boot Options for VM.
2026-03-07 18:41:43 (12224): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-07 18:41:44 (12224): Enabling VM Network Access.
2026-03-07 18:41:44 (12224): Disabling USB Support for VM.
2026-03-07 18:41:44 (12224): Disabling COM Port Support for VM.
2026-03-07 18:41:44 (12224): Disabling LPT Port Support for VM.
2026-03-07 18:41:45 (12224): Disabling Audio Support for VM.
2026-03-07 18:41:45 (12224): Disabling Clipboard Support for VM.
2026-03-07 18:41:45 (12224): Disabling Drag and Drop Support for VM.
2026-03-07 18:41:45 (12224): Adding storage controller(s) to VM.
2026-03-07 18:41:46 (12224): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-07 18:41:46 (12224): Adding VirtualBox Guest Additions to VM.
2026-03-07 18:41:46 (12224): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-07 18:41:47 (12224): forwarding host port 50708 to guest port 80
2026-03-07 18:41:47 (12224): Enabling remote desktop for VM.
2026-03-07 18:41:47 (12224): Required extension pack not installed, remote desktop not enabled.
2026-03-07 18:41:47 (12224): Enabling shared directory for VM.
2026-03-07 18:41:48 (12224): Starting VM using VBoxManage interface. (boinc_5034e64727a93f5a, slot#1)
2026-03-07 18:41:53 (12224): Successfully started VM. (PID = '21260')
2026-03-07 18:41:53 (12224): Reporting VM Process ID to BOINC.
2026-03-07 18:41:53 (12224): Guest Log: BIOS: VirtualBox 7.2.6
2026-03-07 18:41:53 (12224): Guest Log: CPUID EDX: 0x178bfbff
2026-03-07 18:41:53 (12224): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-07 18:41:53 (12224): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-07 18:41:53 (12224): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-07 18:41:53 (12224): Detected: Web Application Enabled (http://localhost:50708)
2026-03-07 18:41:53 (12224): Preference change detected
2026-03-07 18:41:53 (12224): Setting CPU throttle for VM. (90%)
2026-03-07 18:41:53 (12224): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-07 18:41:55 (12224): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-07 18:41:55 (12224): Guest Log: BIOS: Booting from Hard Disk...
2026-03-07 18:41:58 (12224): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-07 18:41:58 (12224): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-07 18:41:58 (12224): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-07 18:42:02 (12224): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-07 18:42:02 (12224): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-07 18:42:06 (12224): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000066 main     Log opened 2026-03-07T18:42:04.213131000Z
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000140 main     OS Product: Linux
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000153 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000164 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000174 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000175 main     Process ID: 1307
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000175 main     Package type: LINUX_64BITS_GENERIC
2026-03-07 18:42:06 (12224): Guest Log: 00:00:00.000577 main     5.2.32 r132073 started. Verbose level = 0
2026-03-07 18:42:06 (12224): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-07 18:42:06 (12224): Guest Log: [INFO] Mounting shared directory
2026-03-07 18:42:06 (12224): Guest Log: [INFO] Checking for init_data.xml
2026-03-07 18:42:09 (12224): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-07 18:42:09 (12224): Guest Log: [INFO] Detected branch: prod
2026-03-07 18:42:10 (12224): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-07 18:42:10 (12224): Guest Log: Copying input files
2026-03-07 18:42:10 (12224): Guest Log: Copied input files into RunAtlas.
2026-03-07 18:42:10 (12224): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-07 18:42:10 (12224): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-07 18:42:10 (12224): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-07 18:42:10 (12224): Guest Log: Further information can be found at the LHC@home message board.
2026-03-07 18:42:16 (12224): Guest Log: 00:00:10.002451 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 832 908 000ns (GuestNow=1 772 905 335 381 776 000 ns GuestLast=1 772 908 924 214 684 000 ns fSetTimeLastLoop=true )
2026-03-07 18:42:20 (12224): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-07 18:42:21 (12224): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-07 18:42:21 (12224): Guest Log: 2.6.3.0 1582 0 32156 157009 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-07 18:42:21 (12224): Guest Log: copied the webapp to /var/www
2026-03-07 18:42:21 (12224): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-07 18:42:21 (12224): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-07 18:42:21 (12224): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-07 18:42:21 (12224): Guest Log:  *** Starting ATLAS job. (PandaID=7043730432 taskID=48967011) ***
2026-03-07 18:55:25 (12224): Preference change detected
2026-03-07 18:55:25 (12224): Setting CPU throttle for VM. (100%)
2026-03-07 18:55:25 (12224): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-07 20:21:59 (12224): Status Report: Elapsed Time: '6000.000000'
2026-03-07 20:21:59 (12224): Status Report: CPU Time: '21776.078125'
2026-03-07 21:21:22 (12224): Guest Log:  *** Job finished ***
2026-03-07 21:21:22 (12224): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:18,300 | INFO     | [data] copytool_in thread has finished
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:18,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:22,782 | INFO     | [data] queue_monitor thread has finished
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:23,050 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139645932058432)>', '<ExcThread(monitor, started 139645207697152)>']
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:23,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:23,843 | INFO     | [monitor] control thread has ended
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,056 | INFO     | all workflow threads have been joined
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,057 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,057 | INFO     | traces error code: 0
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,057 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,157 [wrapper] ==== pilot stdout END ====
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,160 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,163 [wrapper] pilotpid: 5966
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,166 [wrapper] Pilot exit status: 0
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,253 [wrapper] pandaids: 7043730432
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,273 [wrapper] cleanup supervisor_pilot 26585 5967
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,275 [wrapper] Test setup, not cleaning
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,278 [wrapper] apfmon messages muted
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,281 [wrapper] ==== wrapper stdout END ====
2026-03-07 21:21:22 (12224): Guest Log: 2026-03-07 20:21:28,284 [wrapper] ==== wrapper stderr END ====
2026-03-07 21:21:22 (12224): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 21:21:22 (12224): Guest Log:     "exeErrorCode": 0,
2026-03-07 21:21:22 (12224): Guest Log:     "exeErrorDiag": "",
2026-03-07 21:21:22 (12224): Guest Log:     "pilotErrorCode": 0,
2026-03-07 21:21:22 (12224): Guest Log:     "pilotErrorDiag": "",
2026-03-07 21:21:22 (12224): Guest Log:  *** Listing of results directory ***
2026-03-07 21:21:22 (12224): Guest Log: total 211892
2026-03-07 21:21:22 (12224): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 21:33 pilot3.tar.gz
2026-03-07 21:21:22 (12224): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 21:36 runpilot2-wrapper.sh
2026-03-07 21:21:22 (12224): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 21:37 queuedata.json
2026-03-07 21:21:22 (12224): Guest Log: -rwxr-xr-x. 1 atlas atlas      8617 Mar  7 17:42 init_data.xml
2026-03-07 21:21:22 (12224): Guest Log: -rwxr-xr-x. 1 atlas atlas    597942 Mar  7 17:42 input.tar.gz
2026-03-07 21:21:22 (12224): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  7 17:42 start_atlas.sh
2026-03-07 21:21:22 (12224): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  7 17:42 EVNT.48967008._000074.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 21:21:22 (12224): Guest Log: -rw-r--r--. 1 atlas atlas      2562 Mar  7 17:42 pandaJob.out
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas    999177 Mar  7 17:42 agis_schedconf.cvmfs.json
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  7 17:42 agis_ddmendpoints.agis.ALL.json
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas       422 Mar  7 17:43 workernode_map.json
2026-03-07 21:21:22 (12224): Guest Log: drwx------. 5 atlas atlas      4096 Mar  7 17:43 pilot3
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas        95 Mar  7 20:20 pilot_heartbeat.json
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas 209748621 Mar  7 20:20 HITS.48967011._001849.pool.root.1
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas      1026 Mar  7 20:21 memory_monitor_summary.json
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas    337718 Mar  7 20:21 log.48967011._001849.job.log.tgz.1
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas      6332 Mar  7 20:21 heartbeat.json
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas      4608 Mar  7 20:21 pilotlog.txt
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas   1339742 Mar  7 20:21 log.48967011._001849.job.log.1
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas       357 Mar  7 20:21 output.list
2026-03-07 21:21:22 (12224): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  7 20:21 runtime_log
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas   1699840 Mar  7 20:21 result.tar.gz
2026-03-07 21:21:22 (12224): Guest Log: -rw-r--r--. 1 atlas atlas      8736 Mar  7 20:21 runtime_log.err
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas       649 Mar  7 20:21 AKMODml1rI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0mTLDmhEp5Pm.diag
2026-03-07 21:21:22 (12224): Guest Log: Looking for outputfile HITS.48967011._001849.pool.root.1
2026-03-07 21:21:22 (12224): Guest Log: HITS file was successfully produced
2026-03-07 21:21:22 (12224): Guest Log: -rw-------. 1 atlas atlas 209748621 Mar  7 20:20 /home/atlas/RunAtlas/HITS.48967011._001849.pool.root.1
2026-03-07 21:21:23 (12224): Guest Log: Successfully finished the ATLAS job!
2026-03-07 21:21:23 (12224): Guest Log: Copying the results back to the shared directory!
2026-03-07 21:21:23 (12224): Guest Log:  *** Contents of shared directory: ***
2026-03-07 21:21:23 (12224): Guest Log: total 420292
2026-03-07 21:21:23 (12224): Guest Log: -rwxrwxrwx. 1 root root 218297649 Mar  7 17:41 ATLAS.root_0
2026-03-07 21:21:23 (12224): Guest Log: -rwxrwxrwx. 1 root root 209748621 Mar  7 20:21 HITS.pool.root.1
2026-03-07 21:21:23 (12224): Guest Log: -rwxrwxrwx. 1 root root      8617 Mar  7 17:41 init_data.xml
2026-03-07 21:21:23 (12224): Guest Log: -rwxrwxrwx. 1 root root    597942 Mar  7 06:27 input.tar.gz
2026-03-07 21:21:23 (12224): Guest Log: -rwxrwxrwx. 1 root root   1699840 Mar  7 20:21 result.tar.gz
2026-03-07 21:21:23 (12224): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  7 06:27 start_atlas.sh
2026-03-07 21:21:23 (12224): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 21:21:23 (12224): VM Completion File Detected.
2026-03-07 21:21:23 (12224): Powering off VM.
2026-03-07 21:21:23 (12224): Successfully stopped VM.
2026-03-07 21:21:23 (12224): Deregistering VM. (boinc_5034e64727a93f5a, slot#1)
2026-03-07 21:21:23 (12224): Removing network bandwidth throttle group from VM.
2026-03-07 21:21:24 (12224): Removing VM from VirtualBox.
2026-03-07 21:21:29 (12224): called boinc_finish(0)

</stderr_txt>
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