Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:36:40 (15520): wrapper (7.7.26015): starting
01:36:40 (15520): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 01:36:40] Arguments: --nthreads 12
[2026-03-07 01:36:40] Threads: 12
[2026-03-07 01:36:40] Checking for CVMFS
[2026-03-07 01:36:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 01:36:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 01:36:40] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 01:36:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 01:36:40] 2.11.2.0 2933 432770 95716 156991 2 50 12019974 20275201 1 130560 2 184967121 99.944 25963424 17731 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-03-07 01:36:40] CVMFS is ok
[2026-03-07 01:36:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 01:36:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 01:36:40] Further information can be found at the LHC@home message board.
[2026-03-07 01:36:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 01:36:40] Checking for apptainer binary...
[2026-03-07 01:36:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 01:36:40] Running /usr/bin/apptainer --version
[2026-03-07 01:36:40] apptainer version 1.3.2-1.el7
[2026-03-07 01:36:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 01:36:42] c-205-15.aglt2.org
[2026-03-07 01:36:42] apptainer works
[2026-03-07 01:36:42] Set ATHENA_PROC_NUMBER=12
[2026-03-07 01:36:42] Set ATHENA_CORE_NUMBER=12
[2026-03-07 01:36:42] Starting ATLAS job with PandaID=7043761820
[2026-03-07 01:36:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 03:06:16]  *** The last 200 lines of the pilot log: ***
[2026-03-07 03:06:16]  filetype=log
[2026-03-07 03:06:16]  guid=89016556-abde-4a95-a495-86ac8012287d
[2026-03-07 03:06:16]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 03:06:16]  is_altstaged=None
[2026-03-07 03:06:16]  is_tar=False
[2026-03-07 03:06:16]  lfn=log.48967011._002504.job.log.tgz.1
[2026-03-07 03:06:16]  mtime=0
[2026-03-07 03:06:16]  protocol_id=None
[2026-03-07 03:06:16]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 03:06:16]  replicas=None
[2026-03-07 03:06:16]  scope=mc23_13p6TeV
[2026-03-07 03:06:16]  status=None
[2026-03-07 03:06:16]  status_code=0
[2026-03-07 03:06:16]  storage_token=
[2026-03-07 03:06:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7043761820/log.48967011._002504.job.log.tgz.1
[2026-03-07 03:06:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/d4/log.48967011._002504.job.log.tgz.1
[2026-03-07 03:06:16]  workdir=None
[2026-03-07 03:06:16] ]
[2026-03-07 03:06:16] 2026-03-07 08:05:13,664 | INFO     | transferring file log.48967011._002504.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7043761820/log.48967011._002504.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-03-07 03:06:16] 2026-03-07 08:05:13,664 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7043761820/log.48967011._002504.job.log.tgz.1 /tmp/boinchome/slots/0/log.48967011._002504.job
[2026-03-07 03:06:16] 2026-03-07 08:05:13,684 | INFO     | adding to output.list: log.48967011._002504.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/d4/log.48967011._002504.job.log.tg
[2026-03-07 03:06:16] 2026-03-07 08:05:13,685 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 03:06:16] 2026-03-07 08:05:13,685 | INFO     | summary of transferred files:
[2026-03-07 03:06:16] 2026-03-07 08:05:13,686 | INFO     |  -- lfn=log.48967011._002504.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 03:06:16] 2026-03-07 08:05:13,686 | INFO     | stage-out finished correctly
[2026-03-07 03:06:16] 2026-03-07 08:05:13,863 | INFO     | time since job start (5291s) is within the limit (349056.0s)
[2026-03-07 03:06:16] 2026-03-07 08:05:14,992 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 03:06:16] 2026-03-07 08:05:15,350 | INFO     | monitor loop #401: job 0:7043761820 is in state 'finished'
[2026-03-07 03:06:16] 2026-03-07 08:05:15,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,571 | INFO     | job 7043761820 has state=finished
[2026-03-07 03:06:16] 2026-03-07 08:05:15,571 | INFO     | preparing for final server update for job 7043761820 in state='finished'
[2026-03-07 03:06:16] 2026-03-07 08:05:15,571 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7043761820/jobReport.json
[2026-03-07 03:06:16] 2026-03-07 08:05:15,574 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-03-07 03:06:16] 2026-03-07 08:05:15,574 | INFO     | this job has now completed (state=finished)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,575 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,575 | INFO     | log transfer has been attempted: DONE
[2026-03-07 03:06:16] 2026-03-07 08:05:15,575 | INFO     | job 7043761820 has finished - writing final server update
[2026-03-07 03:06:16] 2026-03-07 08:05:15,575 | INFO     | total number of processed events: 400 (read)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,578 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7043761820/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,579 | INFO     | extracted standard info from prmon json
[2026-03-07 03:06:16] 2026-03-07 08:05:15,579 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 03:06:16] 2026-03-07 08:05:15,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 03:06:16] 2026-03-07 08:05:15,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 03:06:16] 2026-03-07 08:05:15,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 03:06:16] 2026-03-07 08:05:15,582 | INFO     | fitting pss+swap vs Time
[2026-03-07 03:06:16] 2026-03-07 08:05:15,582 | INFO     | sum of square deviations: 158737860.0
[2026-03-07 03:06:16] 2026-03-07 08:05:15,582 | INFO     | sum of deviations: -7723907107.999999
[2026-03-07 03:06:16] 2026-03-07 08:05:15,583 | INFO     | mean x: 1772868160.5
[2026-03-07 03:06:16] 2026-03-07 08:05:15,583 | INFO     | mean y: 2739135.9
[2026-03-07 03:06:16] 2026-03-07 08:05:15,583 | INFO     | intersect: 86267408361.20537
[2026-03-07 03:06:16] 2026-03-07 08:05:15,583 | INFO     | chi2: 0.0944620405000451
[2026-03-07 03:06:16] 2026-03-07 08:05:15,583 | INFO     | current memory leak: -48.66 B/s (using 80 data points, chi2=0.09)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,584 | INFO     | could have reported an average CPU frequency of 1795 MHz (6 samples)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,584 | INFO     | ..............................
[2026-03-07 03:06:16] 2026-03-07 08:05:15,584 | INFO     | . Timing measurements:
[2026-03-07 03:06:16] 2026-03-07 08:05:15,584 | INFO     | . get job = 0 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,584 | INFO     | . initial setup = 7 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,584 | INFO     | . payload setup = 7 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,584 | INFO     | . stage-in = 0 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,585 | INFO     | . payload execution = 5267 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,585 | INFO     | . stage-out = 0 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,585 | INFO     | . log creation = 0 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,585 | INFO     | ..............................
[2026-03-07 03:06:16] 2026-03-07 08:05:15,664 | INFO     | 
[2026-03-07 03:06:16] 2026-03-07 08:05:15,664 | INFO     | job summary report
[2026-03-07 03:06:16] 2026-03-07 08:05:15,664 | INFO     | --------------------------------------------------
[2026-03-07 03:06:16] 2026-03-07 08:05:15,664 | INFO     | PanDA job id: 7043761820
[2026-03-07 03:06:16] 2026-03-07 08:05:15,665 | INFO     | task id: 48967011
[2026-03-07 03:06:16] 2026-03-07 08:05:15,665 | INFO     | errors: (none)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,665 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 03:06:16] 2026-03-07 08:05:15,665 | INFO     | pilot state: finished 
[2026-03-07 03:06:16] 2026-03-07 08:05:15,665 | INFO     | transexitcode: 0
[2026-03-07 03:06:16] 2026-03-07 08:05:15,665 | INFO     | exeerrorcode: 0
[2026-03-07 03:06:16] 2026-03-07 08:05:15,666 | INFO     | exeerrordiag: 
[2026-03-07 03:06:16] 2026-03-07 08:05:15,666 | INFO     | exitcode: 0
[2026-03-07 03:06:16] 2026-03-07 08:05:15,666 | INFO     | exitmsg: OK
[2026-03-07 03:06:16] 2026-03-07 08:05:15,666 | INFO     | cpuconsumptiontime: 57749 s
[2026-03-07 03:06:16] 2026-03-07 08:05:15,666 | INFO     | nevents: 400
[2026-03-07 03:06:16] 2026-03-07 08:05:15,666 | INFO     | neventsw: 0
[2026-03-07 03:06:16] 2026-03-07 08:05:15,667 | INFO     | pid: 23641
[2026-03-07 03:06:16] 2026-03-07 08:05:15,667 | INFO     | pgrp: 23641
[2026-03-07 03:06:16] 2026-03-07 08:05:15,667 | INFO     | corecount: 12
[2026-03-07 03:06:16] 2026-03-07 08:05:15,667 | INFO     | event service: False
[2026-03-07 03:06:16] 2026-03-07 08:05:15,667 | INFO     | sizes: {0: 2294731, 1: 2295849, 12: 2295849, 5278: 2322336, 5280: 2331334, 5281: 2331390, 5282: 2331712}
[2026-03-07 03:06:16] 2026-03-07 08:05:15,667 | INFO     | --------------------------------------------------
[2026-03-07 03:06:16] 2026-03-07 08:05:15,667 | INFO     | 
[2026-03-07 03:06:16] 2026-03-07 08:05:15,668 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-03-07 03:06:16] 2026-03-07 08:05:15,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,692 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,692 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,692 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,695 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,695 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 03:06:16] 2026-03-07 08:05:15,695 | INFO     | job 7043761820 has completed (purged errors)
[2026-03-07 03:06:16] 2026-03-07 08:05:15,695 | INFO     | overall cleanup function is called
[2026-03-07 03:06:16] 2026-03-07 08:05:16,703 | INFO     | --- collectZombieJob: --- 10, [23641]
[2026-03-07 03:06:16] 2026-03-07 08:05:16,704 | INFO     | zombie collector waiting for pid 23641
[2026-03-07 03:06:16] 2026-03-07 08:05:16,704 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 03:06:16] 2026-03-07 08:05:16,704 | INFO     | collected zombie processes
[2026-03-07 03:06:16] 2026-03-07 08:05:16,704 | INFO     | will attempt to kill all subprocesses of pid=23641
[2026-03-07 03:06:16] 2026-03-07 08:05:16,800 | INFO     | process IDs to be killed: [23641] (in reverse order)
[2026-03-07 03:06:16] 2026-03-07 08:05:16,853 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 03:06:16] 2026-03-07 08:05:16,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 03:06:16] 2026-03-07 08:05:16,857 | INFO     | did not find any defunct processes belonging to 23641
[2026-03-07 03:06:16] 2026-03-07 08:05:16,860 | INFO     | did not find any defunct processes belonging to 23641
[2026-03-07 03:06:16] 2026-03-07 08:05:16,860 | INFO     | ready for new job
[2026-03-07 03:06:16] 2026-03-07 08:05:16,860 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 03:06:16] 2026-03-07 08:05:16,862 | INFO     | **************************************
[2026-03-07 03:06:16] 2026-03-07 08:05:16,862 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 03:06:16] 2026-03-07 08:05:16,862 | INFO     | **************************************
[2026-03-07 03:06:16] 2026-03-07 08:05:16,862 | INFO     | 
[2026-03-07 03:06:16] 2026-03-07 08:05:16,863 | INFO     | architecture information:
[2026-03-07 03:06:16] 2026-03-07 08:05:16,863 | INFO     | executing command: cat /etc/os-release
[2026-03-07 03:06:16] 2026-03-07 08:05:16,883 | INFO     | cat /etc/os-release:
[2026-03-07 03:06:16] NAME="CentOS Linux"
[2026-03-07 03:06:16] VERSION="7 (Core)"
[2026-03-07 03:06:16] ID="centos"
[2026-03-07 03:06:16] ID_LIKE="rhel fedora"
[2026-03-07 03:06:16] VERSION_ID="7"
[2026-03-07 03:06:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 03:06:16] ANSI_COLOR="0;31"
[2026-03-07 03:06:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 03:06:16] HOME_URL="https://www.centos.org/"
[2026-03-07 03:06:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 03:06:16] 
[2026-03-07 03:06:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 03:06:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 03:06:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 03:06:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 03:06:16] 
[2026-03-07 03:06:16] 2026-03-07 08:05:16,884 | INFO     | **************************************
[2026-03-07 03:06:16] 2026-03-07 08:05:17,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-03-07 03:06:16] 2026-03-07 08:05:17,402 | INFO     | sufficient remaining disk space (29325524992 B)
[2026-03-07 03:06:16] 2026-03-07 08:05:17,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 03:06:16] 2026-03-07 08:05:17,403 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 03:06:16] 2026-03-07 08:05:17,403 | INFO     | update_server=False
[2026-03-07 03:06:16] 2026-03-07 08:05:17,403 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 03:06:16] 2026-03-07 08:05:17,403 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 03:06:16] 2026-03-07 08:05:17,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 03:06:16] 2026-03-07 08:05:17,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 03:06:16] 2026-03-07 08:05:17,444 | INFO     | all payload control threads have been joined
[2026-03-07 03:06:16] 2026-03-07 08:05:17,746 | INFO     | all data control threads have been joined
[2026-03-07 03:06:16] 2026-03-07 08:05:17,854 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 03:06:16] 2026-03-07 08:05:17,854 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 03:06:16] 2026-03-07 08:05:17,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 03:06:16] 2026-03-07 08:05:17,862 | INFO     | will abort loop
[2026-03-07 03:06:16] 2026-03-07 08:05:17,988 | INFO     | all job control threads have been joined
[2026-03-07 03:06:16] 2026-03-07 08:05:18,407 | INFO     | [job] retrieve thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:18,409 | INFO     | [job] queue monitor thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:18,450 | INFO     | [payload] control thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:18,616 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:18,752 | INFO     | [data] control thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:18,868 | INFO     | [job] job monitor thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:18,993 | INFO     | [job] control thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:19,077 | INFO     | [job] validate thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:19,120 | INFO     | [payload] validate_post thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:19,284 | INFO     | [payload] failed_post thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:19,410 | INFO     | [data] copytool_out thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:19,485 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:19,500 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:19,733 | INFO     | [data] copytool_in thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:21,409 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:27,538 | INFO     | job.realtimelogging is not enabled
[2026-03-07 03:06:16] 2026-03-07 08:05:28,541 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 03:06:16] 2026-03-07 08:05:47,069 | INFO     | PID=19222 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-07 03:06:16] 2026-03-07 08:05:47,069 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 03:06:16] 2026-03-07 08:05:47,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 03:06:16] 2026-03-07 08:05:47,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 03:06:16] 2026-03-07 08:06:10,342 | INFO     | [monitor] cgroup control has ended
[2026-03-07 03:06:16] 2026-03-07 08:06:11,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140135190746944)>', '<ExcThread(monitor, started 140134750074624)>']
[2026-03-07 03:06:16] 2026-03-07 08:06:12,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 03:06:16] 2026-03-07 08:06:12,193 | INFO     | [monitor] control thread has ended
[2026-03-07 03:06:16] 2026-03-07 08:06:16,549 | INFO     | all workflow threads have been joined
[2026-03-07 03:06:16] 2026-03-07 08:06:16,549 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 03:06:16] 2026-03-07 08:06:16,549 | INFO     | traces error code: 0
[2026-03-07 03:06:16] 2026-03-07 08:06:16,549 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 03:06:16] 2026-03-07 08:06:16,646 [wrapper] ==== pilot stdout END ====
[2026-03-07 03:06:16] 2026-03-07 08:06:16,651 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 03:06:16] 2026-03-07 08:06:16,655 [wrapper] pilotpid: 19222
[2026-03-07 03:06:16] 2026-03-07 08:06:16,658 [wrapper] Pilot exit status: 0
[2026-03-07 03:06:16] 2026-03-07 08:06:16,674 [wrapper] pandaids: 7043761820
[2026-03-07 03:06:16] 2026-03-07 08:06:16,723 [wrapper] cleanup supervisor_pilot 13342 19223
[2026-03-07 03:06:16] 2026-03-07 08:06:16,727 [wrapper] Test setup, not cleaning
[2026-03-07 03:06:16] 2026-03-07 08:06:16,731 [wrapper] apfmon messages muted
[2026-03-07 03:06:16] 2026-03-07 08:06:16,735 [wrapper] ==== wrapper stdout END ====
[2026-03-07 03:06:16] 2026-03-07 08:06:16,739 [wrapper] ==== wrapper stderr END ====
[2026-03-07 03:06:16]  *** Error codes and diagnostics ***
[2026-03-07 03:06:16]     "exeErrorCode": 0,
[2026-03-07 03:06:16]     "exeErrorDiag": "",
[2026-03-07 03:06:16]     "pilotErrorCode": 0,
[2026-03-07 03:06:16]     "pilotErrorDiag": "",
[2026-03-07 03:06:16]  *** Listing of results directory ***
[2026-03-07 03:06:16] total 418772
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas    584627 Mar  6 16:33 pilot3.tar.gz
[2026-03-07 03:06:16] -rwx------ 1 boincer umatlas     36322 Mar  6 16:35 runpilot2-wrapper.sh
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas      5111 Mar  6 16:35 queuedata.json
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas       100 Mar  7 01:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 03:06:16] -rwxr-xr-x 1 boincer umatlas      7986 Mar  7 01:36 run_atlas
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas       105 Mar  7 01:36 job.xml
[2026-03-07 03:06:16] -rw-r--r-- 2 boincer umatlas 219493073 Mar  7 01:36 EVNT.48967008._000100.pool.root.1
[2026-03-07 03:06:16] -rw-r--r-- 2 boincer umatlas     15845 Mar  7 01:36 start_atlas.sh
[2026-03-07 03:06:16] drwxrwx--x 2 boincer umatlas      4096 Mar  7 01:36 shared
[2026-03-07 03:06:16] -rw-r--r-- 2 boincer umatlas    597943 Mar  7 01:36 input.tar.gz
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas         0 Mar  7 01:36 boinc_lockfile
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas      2570 Mar  7 01:36 pandaJob.out
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas        57 Mar  7 01:36 setup.sh.local
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas    999147 Mar  7 01:36 agis_schedconf.cvmfs.json
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas   1521291 Mar  7 01:36 agis_ddmendpoints.agis.ALL.json
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas       445 Mar  7 01:37 workernode_map.json
[2026-03-07 03:06:16] drwx------ 5 boincer umatlas      4096 Mar  7 01:37 pilot3
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas      5953 Mar  7 03:01 init_data.xml
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas 203070559 Mar  7 03:04 HITS.48967011._002504.pool.root.1
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas       529 Mar  7 03:04 boinc_task_state.xml
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas      1046 Mar  7 03:05 memory_monitor_summary.json
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas        95 Mar  7 03:05 pilot_heartbeat.json
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas    403587 Mar  7 03:05 log.48967011._002504.job.log.tgz.1
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas      6418 Mar  7 03:05 heartbeat.json
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas        27 Mar  7 03:05 wrapper_checkpoint.txt
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas      8192 Mar  7 03:05 boinc_mmap_file
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas      5000 Mar  7 03:06 pilotlog.txt
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas    760911 Mar  7 03:06 log.48967011._002504.job.log.1
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas       357 Mar  7 03:06 output.list
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas       620 Mar  7 03:06 runtime_log
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas   1177600 Mar  7 03:06 result.tar.gz
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas      9343 Mar  7 03:06 runtime_log.err
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas       659 Mar  7 03:06 FGDODmA0rI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmGaRLDmt1IrFo.diag
[2026-03-07 03:06:16] -rw-r--r-- 1 boincer umatlas     21260 Mar  7 03:06 stderr.txt
[2026-03-07 03:06:16] HITS file was successfully produced:
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas 203070559 Mar  7 03:04 shared/HITS.pool.root.1
[2026-03-07 03:06:16]  *** Contents of shared directory: ***
[2026-03-07 03:06:16] total 414416
[2026-03-07 03:06:16] -rw-r--r-- 2 boincer umatlas 219493073 Mar  7 01:36 ATLAS.root_0
[2026-03-07 03:06:16] -rw-r--r-- 2 boincer umatlas     15845 Mar  7 01:36 start_atlas.sh
[2026-03-07 03:06:16] -rw-r--r-- 2 boincer umatlas    597943 Mar  7 01:36 input.tar.gz
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas 203070559 Mar  7 03:04 HITS.pool.root.1
[2026-03-07 03:06:16] -rw------- 1 boincer umatlas   1177600 Mar  7 03:06 result.tar.gz
03:06:18 (15520): run_atlas exited; CPU time 57729.872063
03:06:18 (15520): called boinc_finish(0)

</stderr_txt>
]]>

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