Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:02 (830163): wrapper (7.7.26015): starting
05:47:02 (830163): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 05:47:02] Arguments: --nthreads 4
[2026-03-08 05:47:02] Threads: 4
[2026-03-08 05:47:02] Checking for CVMFS
[2026-03-08 05:47:02] No cvmfs_config command found, will try listing directly
[2026-03-08 05:47:02] CVMFS is ok
[2026-03-08 05:47:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 05:47:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 05:47:02] Further information can be found at the LHC@home message board.
[2026-03-08 05:47:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 05:47:02] Checking for apptainer binary...
[2026-03-08 05:47:02] which: no apptainer in ((null))
[2026-03-08 05:47:02] apptainer is not installed, using version from CVMFS
[2026-03-08 05:47:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 05:47:02] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot92/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-08 05:47:02] apptainer works
[2026-03-08 05:47:02] Set ATHENA_PROC_NUMBER=4
[2026-03-08 05:47:02] Set ATHENA_CORE_NUMBER=4
[2026-03-08 05:47:02] Starting ATLAS job with PandaID=7043789809
[2026-03-08 05:47:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot92/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 07:12:28]  *** The last 200 lines of the pilot log: ***
[2026-03-08 07:12:28]  is_altstaged=None
[2026-03-08 07:12:28]  is_tar=False
[2026-03-08 07:12:28]  lfn=log.48958593._000435.job.log.tgz.1
[2026-03-08 07:12:28]  mtime=0
[2026-03-08 07:12:28]  protocol_id=None
[2026-03-08 07:12:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 07:12:28]  replicas=None
[2026-03-08 07:12:28]  scope=mc23_13p6TeV
[2026-03-08 07:12:28]  status=None
[2026-03-08 07:12:28]  status_code=0
[2026-03-08 07:12:28]  storage_token=
[2026-03-08 07:12:28]  surl=/var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7043789809/log.48958593._000435.job.log.tgz.1
[2026-03-08 07:12:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/df/log.48958593._000435.job.log.tgz.1
[2026-03-08 07:12:28]  workdir=None
[2026-03-08 07:12:28] ]
[2026-03-08 07:12:28] 2026-03-08 06:11:50,310 | INFO     | time since job start (5076s) is within the limit (349056.0s)
[2026-03-08 07:12:28] 2026-03-08 06:11:50,320 | INFO     | transferring file log.48958593._000435.job.log.tgz.1 from /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7043789809/log.48958593._000435.job.log.tgz.1 to /var/lib/b
[2026-03-08 07:12:28] 2026-03-08 06:11:50,320 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7043789809/log.48958593._000435.job.log.tgz.1 /var/lib/boinc/var/slot92/slots/2/lo
[2026-03-08 07:12:28] 2026-03-08 06:11:50,332 | INFO     | adding to output.list: log.48958593._000435.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7d/df/log.48958593._000435.job.log.tg
[2026-03-08 07:12:28] 2026-03-08 06:11:50,333 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 07:12:28] 2026-03-08 06:11:50,333 | INFO     | summary of transferred files:
[2026-03-08 07:12:28] 2026-03-08 06:11:50,333 | INFO     |  -- lfn=log.48958593._000435.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 07:12:28] 2026-03-08 06:11:50,333 | INFO     | stage-out finished correctly
[2026-03-08 07:12:28] 2026-03-08 06:11:50,784 | INFO     | monitor loop #371: job 0:7043789809 is in state 'finished'
[2026-03-08 07:12:28] 2026-03-08 06:11:50,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 07:12:28] 2026-03-08 06:11:52,321 | INFO     | time since job start (5078s) is within the limit (349056.0s)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,195 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 07:12:28] 2026-03-08 06:11:53,225 | INFO     | job 7043789809 has state=finished
[2026-03-08 07:12:28] 2026-03-08 06:11:53,225 | INFO     | preparing for final server update for job 7043789809 in state='finished'
[2026-03-08 07:12:28] 2026-03-08 06:11:53,225 | INFO     | reading metadata from: /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7043789809/jobReport.json
[2026-03-08 07:12:28] 2026-03-08 06:11:53,227 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot92/slots/2/workernode_map.json
[2026-03-08 07:12:28] 2026-03-08 06:11:53,227 | INFO     | this job has now completed (state=finished)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,227 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,227 | INFO     | log transfer has been attempted: DONE
[2026-03-08 07:12:28] 2026-03-08 06:11:53,227 | INFO     | job 7043789809 has finished - writing final server update
[2026-03-08 07:12:28] 2026-03-08 06:11:53,227 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2959497/.job.ad'
[2026-03-08 07:12:28] 2026-03-08 06:11:53,227 | INFO     | total number of processed events: 400 (read)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,238 | INFO     | using path: /var/lib/boinc/var/slot92/slots/2/PanDA_Pilot-7043789809/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,238 | INFO     | extracted standard info from prmon json
[2026-03-08 07:12:28] 2026-03-08 06:11:53,238 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 07:12:28] 2026-03-08 06:11:53,238 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 07:12:28] 2026-03-08 06:11:53,238 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 07:12:28] 2026-03-08 06:11:53,238 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 07:12:28] 2026-03-08 06:11:53,239 | INFO     | fitting pss+swap vs Time
[2026-03-08 07:12:28] 2026-03-08 06:11:53,239 | INFO     | sum of square deviations: 136095575.0
[2026-03-08 07:12:28] 2026-03-08 06:11:53,239 | INFO     | sum of deviations: 274569052.00000006
[2026-03-08 07:12:28] 2026-03-08 06:11:53,239 | INFO     | mean x: 1772947846.5
[2026-03-08 07:12:28] 2026-03-08 06:11:53,239 | INFO     | mean y: 2340556.8684210526
[2026-03-08 07:12:28] 2026-03-08 06:11:53,239 | INFO     | intersect: -3574532603.4745708
[2026-03-08 07:12:28] 2026-03-08 06:11:53,239 | INFO     | chi2: 0.00020798679297722288
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | current memory leak: 2.02 B/s (using 76 data points, chi2=0.00)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | could have reported an average CPU frequency of 3590 MHz (6 samples)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | ..............................
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . Timing measurements:
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . get job = 0 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . initial setup = 4 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . payload setup = 4 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . stage-in = 0 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . payload execution = 5054 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . stage-out = 0 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | . log creation = 0 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,240 | INFO     | ..............................
[2026-03-08 07:12:28] 2026-03-08 06:11:53,273 | INFO     | 
[2026-03-08 07:12:28] 2026-03-08 06:11:53,273 | INFO     | job summary report
[2026-03-08 07:12:28] 2026-03-08 06:11:53,273 | INFO     | --------------------------------------------------
[2026-03-08 07:12:28] 2026-03-08 06:11:53,273 | INFO     | PanDA job id: 7043789809
[2026-03-08 07:12:28] 2026-03-08 06:11:53,273 | INFO     | task id: 48958593
[2026-03-08 07:12:28] 2026-03-08 06:11:53,273 | INFO     | errors: (none)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | pilot state: finished 
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | transexitcode: 0
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | exeerrorcode: 0
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | exeerrordiag: 
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | exitcode: 0
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | exitmsg: OK
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | cpuconsumptiontime: 19229 s
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | nevents: 400
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | neventsw: 0
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | pid: 840500
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | pgrp: 840500
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | corecount: 4
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | event service: False
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | sizes: {0: 2295428, 1: 2295889, 11: 2295889, 5063: 2322236, 5065: 2331256, 5068: 2331634}
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | --------------------------------------------------
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | 
[2026-03-08 07:12:28] 2026-03-08 06:11:53,274 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot92/slots/2
[2026-03-08 07:12:28] 2026-03-08 06:11:53,288 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,288 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,288 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,288 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | job 7043789809 has completed (purged errors)
[2026-03-08 07:12:28] 2026-03-08 06:11:53,289 | INFO     | overall cleanup function is called
[2026-03-08 07:12:28] 2026-03-08 06:11:54,295 | INFO     | --- collectZombieJob: --- 10, [840500]
[2026-03-08 07:12:28] 2026-03-08 06:11:54,295 | INFO     | zombie collector waiting for pid 840500
[2026-03-08 07:12:28] 2026-03-08 06:11:54,295 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 07:12:28] 2026-03-08 06:11:54,295 | INFO     | collected zombie processes
[2026-03-08 07:12:28] 2026-03-08 06:11:54,295 | INFO     | will attempt to kill all subprocesses of pid=840500
[2026-03-08 07:12:28] 2026-03-08 06:11:54,715 | INFO     | process IDs to be killed: [840500] (in reverse order)
[2026-03-08 07:12:28] 2026-03-08 06:11:54,936 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 07:12:28] 2026-03-08 06:11:54,936 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 07:12:28] 2026-03-08 06:11:54,962 | INFO     | did not find any defunct processes belonging to 840500
[2026-03-08 07:12:28] 2026-03-08 06:11:54,988 | INFO     | did not find any defunct processes belonging to 840500
[2026-03-08 07:12:28] 2026-03-08 06:11:54,988 | INFO     | ready for new job
[2026-03-08 07:12:28] 2026-03-08 06:11:54,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 07:12:28] 2026-03-08 06:11:54,989 | INFO     | **************************************
[2026-03-08 07:12:28] 2026-03-08 06:11:54,990 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 07:12:28] 2026-03-08 06:11:54,990 | INFO     | **************************************
[2026-03-08 07:12:28] 2026-03-08 06:11:54,990 | INFO     | 
[2026-03-08 07:12:28] 2026-03-08 06:11:54,995 | INFO     | architecture information:
[2026-03-08 07:12:28] 2026-03-08 06:11:54,996 | INFO     | executing command: cat /etc/os-release
[2026-03-08 07:12:28] 2026-03-08 06:11:55,010 | INFO     | cat /etc/os-release:
[2026-03-08 07:12:28] NAME="CentOS Linux"
[2026-03-08 07:12:28] VERSION="7 (Core)"
[2026-03-08 07:12:28] ID="centos"
[2026-03-08 07:12:28] ID_LIKE="rhel fedora"
[2026-03-08 07:12:28] VERSION_ID="7"
[2026-03-08 07:12:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 07:12:28] ANSI_COLOR="0;31"
[2026-03-08 07:12:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 07:12:28] HOME_URL="https://www.centos.org/"
[2026-03-08 07:12:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 07:12:28] 
[2026-03-08 07:12:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 07:12:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 07:12:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 07:12:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 07:12:28] 
[2026-03-08 07:12:28] 2026-03-08 06:11:55,010 | INFO     | **************************************
[2026-03-08 07:12:28] 2026-03-08 06:11:55,513 | INFO     | executing command: df -mP /var/lib/boinc/var/slot92/slots/2
[2026-03-08 07:12:28] 2026-03-08 06:11:55,528 | INFO     | sufficient remaining disk space (19573768192 B)
[2026-03-08 07:12:28] 2026-03-08 06:11:55,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 07:12:28] 2026-03-08 06:11:55,529 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 07:12:28] 2026-03-08 06:11:55,529 | INFO     | update_server=False
[2026-03-08 07:12:28] 2026-03-08 06:11:55,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 07:12:28] 2026-03-08 06:11:55,529 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 07:12:28] 2026-03-08 06:11:55,789 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-08 07:12:28] 2026-03-08 06:11:55,789 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-08 07:12:28] 2026-03-08 06:11:55,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:12:28] 2026-03-08 06:11:55,789 | INFO     | will abort loop
[2026-03-08 07:12:28] 2026-03-08 06:11:55,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 07:12:28] 2026-03-08 06:11:56,237 | INFO     | all data control threads have been joined
[2026-03-08 07:12:28] 2026-03-08 06:11:56,534 | INFO     | [job] retrieve thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:56,706 | INFO     | all payload control threads have been joined
[2026-03-08 07:12:28] 2026-03-08 06:11:56,762 | INFO     | [job] validate thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:56,794 | INFO     | [job] job monitor thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:56,955 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:56,984 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:57,104 | INFO     | [payload] failed_post thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:57,107 | INFO     | all job control threads have been joined
[2026-03-08 07:12:28] 2026-03-08 06:11:57,161 | INFO     | [data] copytool_in thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:57,242 | INFO     | [data] control thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:57,287 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:57,636 | INFO     | [payload] validate_post thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:57,710 | INFO     | [payload] control thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:57,893 | INFO     | [data] copytool_out thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:58,108 | INFO     | [job] control thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:58,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 07:12:28] 2026-03-08 06:11:59,289 | INFO     | [job] queue monitor thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:11:59,534 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:12:06,299 | INFO     | job.realtimelogging is not enabled
[2026-03-08 07:12:28] 2026-03-08 06:12:07,304 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 07:12:28] 2026-03-08 06:12:22,289 | INFO     | [monitor] cgroup control has ended
[2026-03-08 07:12:28] 2026-03-08 06:12:23,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23297222207296)>', '<ExcThread(monitor, started 23296979769088)>']
[2026-03-08 07:12:28] 2026-03-08 06:12:25,875 | INFO     | PID=834702 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 07:12:28] 2026-03-08 06:12:25,876 | INFO     | .. there are 54 such processes running
[2026-03-08 07:12:28] 2026-03-08 06:12:25,876 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 07:12:28] 2026-03-08 06:12:25,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 07:12:28] 2026-03-08 06:12:25,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 07:12:28] 2026-03-08 06:12:25,876 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 07:12:28] 2026-03-08 06:12:25,876 | INFO     | [monitor] control thread has ended
[2026-03-08 07:12:28] 2026-03-08 06:12:28,546 | INFO     | all workflow threads have been joined
[2026-03-08 07:12:28] 2026-03-08 06:12:28,546 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 07:12:28] 2026-03-08 06:12:28,546 | INFO     | traces error code: 0
[2026-03-08 07:12:28] 2026-03-08 06:12:28,547 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 07:12:28] 2026-03-08 06:12:28,715 [wrapper] ==== pilot stdout END ====
[2026-03-08 07:12:28] 2026-03-08 06:12:28,718 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 07:12:28] 2026-03-08 06:12:28,720 [wrapper] pilotpid: 834702
[2026-03-08 07:12:28] 2026-03-08 06:12:28,722 [wrapper] Pilot exit status: 0
[2026-03-08 07:12:28] 2026-03-08 06:12:28,732 [wrapper] pandaids: 7043789809
[2026-03-08 07:12:28] 2026-03-08 06:12:28,855 [wrapper] cleanup supervisor_pilot 1642179 834703
[2026-03-08 07:12:28] 2026-03-08 06:12:28,858 [wrapper] Test setup, not cleaning
[2026-03-08 07:12:28] 2026-03-08 06:12:28,861 [wrapper] apfmon messages muted
[2026-03-08 07:12:28] 2026-03-08 06:12:28,863 [wrapper] ==== wrapper stdout END ====
[2026-03-08 07:12:28] 2026-03-08 06:12:28,865 [wrapper] ==== wrapper stderr END ====
[2026-03-08 07:12:28]  *** Error codes and diagnostics ***
[2026-03-08 07:12:28]     "exeErrorCode": 0,
[2026-03-08 07:12:28]     "exeErrorDiag": "",
[2026-03-08 07:12:28]     "pilotErrorCode": 0,
[2026-03-08 07:12:28]     "pilotErrorDiag": "",
[2026-03-08 07:12:28]  *** Listing of results directory ***
[2026-03-08 07:12:28] total 440792
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc    584627 Mar  6 22:33 pilot3.tar.gz
[2026-03-08 07:12:28] -rwx------. 1 boinc boinc     36322 Mar  6 22:34 runpilot2-wrapper.sh
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc      5111 Mar  6 22:34 queuedata.json
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc       100 Mar  8 05:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 07:12:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 05:46 run_atlas
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc       105 Mar  8 05:46 job.xml
[2026-03-08 07:12:28] -rw-r--r--. 2 boinc boinc     15845 Mar  8 05:47 start_atlas.sh
[2026-03-08 07:12:28] drwxrwx--x. 2 boinc boinc      4096 Mar  8 05:47 shared
[2026-03-08 07:12:28] -rw-r--r--. 2 boinc boinc    597972 Mar  8 05:47 input.tar.gz
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc      6707 Mar  8 05:47 init_data.xml
[2026-03-08 07:12:28] -rw-r--r--. 2 boinc boinc 263361506 Mar  8 05:47 EVNT.48958591._000017.pool.root.1
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc         0 Mar  8 05:47 boinc_lockfile
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc      2617 Mar  8 05:47 pandaJob.out
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc    999169 Mar  8 05:47 agis_schedconf.cvmfs.json
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc   1521291 Mar  8 05:47 agis_ddmendpoints.agis.ALL.json
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc       443 Mar  8 05:47 workernode_map.json
[2026-03-08 07:12:28] drwx------. 5 boinc boinc      4096 Mar  8 05:47 pilot3
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc 182020018 Mar  8 07:11 HITS.48958593._000435.pool.root.1
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc       529 Mar  8 07:11 boinc_task_state.xml
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc      1030 Mar  8 07:11 memory_monitor_summary.json
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc    281531 Mar  8 07:11 log.48958593._000435.job.log.tgz.1
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc      6348 Mar  8 07:11 heartbeat.json
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc        27 Mar  8 07:12 wrapper_checkpoint.txt
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc      8192 Mar  8 07:12 boinc_mmap_file
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc        95 Mar  8 07:12 pilot_heartbeat.json
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc      5086 Mar  8 07:12 pilotlog.txt
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc    743406 Mar  8 07:12 log.48958593._000435.job.log.1
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc       357 Mar  8 07:12 output.list
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc       620 Mar  8 07:12 runtime_log
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc   1044480 Mar  8 07:12 result.tar.gz
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc      9204 Mar  8 07:12 runtime_log.err
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc       662 Mar  8 07:12 QRtMDmrzrI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmvWRLDmr7fZjm.diag
[2026-03-08 07:12:28] -rw-r--r--. 1 boinc boinc     21308 Mar  8 07:12 stderr.txt
[2026-03-08 07:12:28] HITS file was successfully produced:
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc 182020018 Mar  8 07:11 shared/HITS.pool.root.1
[2026-03-08 07:12:28]  *** Contents of shared directory: ***
[2026-03-08 07:12:28] total 436576
[2026-03-08 07:12:28] -rw-r--r--. 2 boinc boinc     15845 Mar  8 05:47 start_atlas.sh
[2026-03-08 07:12:28] -rw-r--r--. 2 boinc boinc    597972 Mar  8 05:47 input.tar.gz
[2026-03-08 07:12:28] -rw-r--r--. 2 boinc boinc 263361506 Mar  8 05:47 ATLAS.root_0
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc 182020018 Mar  8 07:11 HITS.pool.root.1
[2026-03-08 07:12:28] -rw-------. 1 boinc boinc   1044480 Mar  8 07:12 result.tar.gz
07:12:30 (830163): run_atlas exited; CPU time 19444.467963
07:12:30 (830163): called boinc_finish(0)

</stderr_txt>
]]>

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