Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:28:52 (3009594): wrapper (7.7.26015): starting
15:28:52 (3009594): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 15:28:52] Arguments: --nthreads 12
[2026-03-07 15:28:52] Threads: 12
[2026-03-07 15:28:52] Checking for CVMFS
[2026-03-07 15:28:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 15:28:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 15:28:52] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 15:28:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 15:28:52] 2.13.3.0 8852 37196 219672 157003 1 188 40536704 46080000 6454 130560 0 134007070 99.851 49579727 25361 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-07 15:28:52] CVMFS is ok
[2026-03-07 15:28:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 15:28:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 15:28:52] Further information can be found at the LHC@home message board.
[2026-03-07 15:28:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 15:28:52] Checking for apptainer binary...
[2026-03-07 15:28:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 15:28:52] Running /usr/bin/apptainer --version
[2026-03-07 15:28:52] apptainer version 1.4.5-2.el9
[2026-03-07 15:28:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 15:28:53] mff2103.farm.particle.cz
[2026-03-07 15:28:53] apptainer works
[2026-03-07 15:28:53] Set ATHENA_PROC_NUMBER=12
[2026-03-07 15:28:53] Set ATHENA_CORE_NUMBER=12
[2026-03-07 15:28:53] Starting ATLAS job with PandaID=7039030603
[2026-03-07 15:28:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 16:18:33]  *** The last 200 lines of the pilot log: ***
[2026-03-07 16:18:33]  is_altstaged=None
[2026-03-07 16:18:33]  is_tar=False
[2026-03-07 16:18:33]  lfn=log.48955010._008892.job.log.tgz.1
[2026-03-07 16:18:33]  mtime=0
[2026-03-07 16:18:33]  protocol_id=None
[2026-03-07 16:18:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 16:18:33]  replicas=None
[2026-03-07 16:18:33]  scope=mc23_13p6TeV
[2026-03-07 16:18:33]  status=None
[2026-03-07 16:18:33]  status_code=0
[2026-03-07 16:18:33]  storage_token=
[2026-03-07 16:18:33]  surl=/scratch/.boinc/slots/5/PanDA_Pilot-7039030603/log.48955010._008892.job.log.tgz.1
[2026-03-07 16:18:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/f2/log.48955010._008892.job.log.tgz.1
[2026-03-07 16:18:33]  workdir=None
[2026-03-07 16:18:33] ]
[2026-03-07 16:18:33] 2026-03-07 15:17:55,449 | INFO     | transferring file log.48955010._008892.job.log.tgz.1 from /scratch/.boinc/slots/5/PanDA_Pilot-7039030603/log.48955010._008892.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-07 16:18:33] 2026-03-07 15:17:55,450 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/5/PanDA_Pilot-7039030603/log.48955010._008892.job.log.tgz.1 /scratch/.boinc/slots/5/log.48955010._008892.j
[2026-03-07 16:18:33] 2026-03-07 15:17:55,476 | INFO     | adding to output.list: log.48955010._008892.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/f2/log.48955010._008892.job.log.tg
[2026-03-07 16:18:33] 2026-03-07 15:17:55,476 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 16:18:33] 2026-03-07 15:17:55,477 | INFO     | summary of transferred files:
[2026-03-07 16:18:33] 2026-03-07 15:17:55,477 | INFO     |  -- lfn=log.48955010._008892.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 16:18:33] 2026-03-07 15:17:55,477 | INFO     | stage-out finished correctly
[2026-03-07 16:18:33] 2026-03-07 15:17:56,734 | INFO     | monitor loop #217: job 0:7039030603 is in state 'finished'
[2026-03-07 16:18:33] 2026-03-07 15:17:56,778 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 16:18:33] 2026-03-07 15:17:57,105 | INFO     | time since job start (2925s) is within the limit (349056.0s)
[2026-03-07 16:18:33] 2026-03-07 15:17:57,547 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 16:18:33] 2026-03-07 15:17:59,111 | INFO     | time since job start (2927s) is within the limit (349056.0s)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,281 | INFO     | monitor loop #218: job 0:7039030603 is in state 'finished'
[2026-03-07 16:18:33] 2026-03-07 15:17:59,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,398 | INFO     | job 7039030603 has state=finished
[2026-03-07 16:18:33] 2026-03-07 15:17:59,398 | INFO     | preparing for final server update for job 7039030603 in state='finished'
[2026-03-07 16:18:33] 2026-03-07 15:17:59,398 | INFO     | reading metadata from: /scratch/.boinc/slots/5/PanDA_Pilot-7039030603/jobReport.json
[2026-03-07 16:18:33] 2026-03-07 15:17:59,401 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/5/workernode_map.json
[2026-03-07 16:18:33] 2026-03-07 15:17:59,401 | INFO     | this job has now completed (state=finished)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,401 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,401 | INFO     | log transfer has been attempted: DONE
[2026-03-07 16:18:33] 2026-03-07 15:17:59,402 | INFO     | job 7039030603 has finished - writing final server update
[2026-03-07 16:18:33] 2026-03-07 15:17:59,402 | INFO     | total number of processed events: 400 (read)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,420 | INFO     | using path: /scratch/.boinc/slots/5/PanDA_Pilot-7039030603/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,420 | INFO     | extracted standard info from prmon json
[2026-03-07 16:18:33] 2026-03-07 15:17:59,421 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 16:18:33] 2026-03-07 15:17:59,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 16:18:33] 2026-03-07 15:17:59,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 16:18:33] 2026-03-07 15:17:59,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 16:18:33] 2026-03-07 15:17:59,423 | INFO     | fitting pss+swap vs Time
[2026-03-07 16:18:33] 2026-03-07 15:17:59,423 | INFO     | sum of square deviations: 21358540.0
[2026-03-07 16:18:33] 2026-03-07 15:17:59,423 | INFO     | sum of deviations: -598834011.0000001
[2026-03-07 16:18:33] 2026-03-07 15:17:59,423 | INFO     | mean x: 1772895302.0
[2026-03-07 16:18:33] 2026-03-07 15:17:59,423 | INFO     | mean y: 2732601.9024390243
[2026-03-07 16:18:33] 2026-03-07 15:17:59,423 | INFO     | intersect: 49709782090.29053
[2026-03-07 16:18:33] 2026-03-07 15:17:59,423 | INFO     | chi2: 0.0023787973551005017
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | current memory leak: -28.04 B/s (using 41 data points, chi2=0.00)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | could have reported an average CPU frequency of 2778 MHz (5 samples)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | ..............................
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | . Timing measurements:
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | . get job = 0 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | . initial setup = 7 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | . payload setup = 7 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,424 | INFO     | . stage-in = 0 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,425 | INFO     | . payload execution = 2899 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,425 | INFO     | . stage-out = 0 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,425 | INFO     | . log creation = 0 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,425 | INFO     | ..............................
[2026-03-07 16:18:33] 2026-03-07 15:17:59,513 | INFO     | 
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | job summary report
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | --------------------------------------------------
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | PanDA job id: 7039030603
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | task id: 48955010
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | errors: (none)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | pilot state: finished 
[2026-03-07 16:18:33] 2026-03-07 15:17:59,514 | INFO     | transexitcode: 0
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | exeerrorcode: 0
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | exeerrordiag: 
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | exitcode: 0
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | exitmsg: OK
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | cpuconsumptiontime: 30787 s
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | nevents: 400
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | neventsw: 0
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | pid: 3018676
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | pgrp: 3018676
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | corecount: 12
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | event service: False
[2026-03-07 16:18:33] 2026-03-07 15:17:59,515 | INFO     | sizes: {0: 2295318, 1: 2295779, 11: 2295779, 2910: 2321244, 2911: 2321243, 2912: 2330299, 2915: 2330483, 2916: 2330709}
[2026-03-07 16:18:33] 2026-03-07 15:17:59,516 | INFO     | --------------------------------------------------
[2026-03-07 16:18:33] 2026-03-07 15:17:59,516 | INFO     | 
[2026-03-07 16:18:33] 2026-03-07 15:17:59,516 | INFO     | executing command: ls -lF /scratch/.boinc/slots/5
[2026-03-07 16:18:33] 2026-03-07 15:17:59,547 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,548 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,549 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 16:18:33] 2026-03-07 15:17:59,550 | INFO     | job 7039030603 has completed (purged errors)
[2026-03-07 16:18:33] 2026-03-07 15:17:59,550 | INFO     | overall cleanup function is called
[2026-03-07 16:18:33] 2026-03-07 15:18:00,560 | INFO     | --- collectZombieJob: --- 10, [3018676]
[2026-03-07 16:18:33] 2026-03-07 15:18:00,561 | INFO     | zombie collector waiting for pid 3018676
[2026-03-07 16:18:33] 2026-03-07 15:18:00,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 16:18:33] 2026-03-07 15:18:00,561 | INFO     | collected zombie processes
[2026-03-07 16:18:33] 2026-03-07 15:18:00,561 | INFO     | will attempt to kill all subprocesses of pid=3018676
[2026-03-07 16:18:33] 2026-03-07 15:18:00,825 | INFO     | process IDs to be killed: [3018676] (in reverse order)
[2026-03-07 16:18:33] 2026-03-07 15:18:00,909 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 16:18:33] 2026-03-07 15:18:00,909 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 16:18:33] 2026-03-07 15:18:00,922 | INFO     | did not find any defunct processes belonging to 3018676
[2026-03-07 16:18:33] 2026-03-07 15:18:00,932 | INFO     | did not find any defunct processes belonging to 3018676
[2026-03-07 16:18:33] 2026-03-07 15:18:00,932 | INFO     | ready for new job
[2026-03-07 16:18:33] 2026-03-07 15:18:00,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 16:18:33] 2026-03-07 15:18:00,934 | INFO     | **************************************
[2026-03-07 16:18:33] 2026-03-07 15:18:00,934 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 16:18:33] 2026-03-07 15:18:00,934 | INFO     | **************************************
[2026-03-07 16:18:33] 2026-03-07 15:18:00,934 | INFO     | 
[2026-03-07 16:18:33] 2026-03-07 15:18:00,940 | INFO     | architecture information:
[2026-03-07 16:18:33] 2026-03-07 15:18:00,940 | INFO     | executing command: cat /etc/os-release
[2026-03-07 16:18:33] 2026-03-07 15:18:00,957 | INFO     | cat /etc/os-release:
[2026-03-07 16:18:33] NAME="CentOS Linux"
[2026-03-07 16:18:33] VERSION="7 (Core)"
[2026-03-07 16:18:33] ID="centos"
[2026-03-07 16:18:33] ID_LIKE="rhel fedora"
[2026-03-07 16:18:33] VERSION_ID="7"
[2026-03-07 16:18:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 16:18:33] ANSI_COLOR="0;31"
[2026-03-07 16:18:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 16:18:33] HOME_URL="https://www.centos.org/"
[2026-03-07 16:18:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 16:18:33] 
[2026-03-07 16:18:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 16:18:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 16:18:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 16:18:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 16:18:33] 
[2026-03-07 16:18:33] 2026-03-07 15:18:00,958 | INFO     | **************************************
[2026-03-07 16:18:33] 2026-03-07 15:18:01,460 | INFO     | executing command: df -mP /scratch/.boinc/slots/5
[2026-03-07 16:18:33] 2026-03-07 15:18:01,485 | INFO     | sufficient remaining disk space (1674776150016 B)
[2026-03-07 16:18:33] 2026-03-07 15:18:01,485 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 16:18:33] 2026-03-07 15:18:01,485 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 16:18:33] 2026-03-07 15:18:01,485 | INFO     | update_server=False
[2026-03-07 16:18:33] 2026-03-07 15:18:01,486 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 16:18:33] 2026-03-07 15:18:01,486 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:18:33] 2026-03-07 15:18:01,486 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 16:18:33] 2026-03-07 15:18:01,688 | INFO     | all payload control threads have been joined
[2026-03-07 16:18:33] 2026-03-07 15:18:01,689 | INFO     | all job control threads have been joined
[2026-03-07 16:18:33] 2026-03-07 15:18:01,785 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 16:18:33] 2026-03-07 15:18:01,785 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 16:18:33] 2026-03-07 15:18:01,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:18:33] 2026-03-07 15:18:01,786 | INFO     | will abort loop
[2026-03-07 16:18:33] 2026-03-07 15:18:02,176 | INFO     | all data control threads have been joined
[2026-03-07 16:18:33] 2026-03-07 15:18:02,487 | INFO     | [job] retrieve thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,492 | INFO     | [job] queue monitor thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,561 | INFO     | [payload] failed_post thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,625 | INFO     | [job] validate thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,661 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,694 | INFO     | [payload] control thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,694 | INFO     | [job] control thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,791 | INFO     | [job] job monitor thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:02,969 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:03,087 | INFO     | [payload] validate_post thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:03,088 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:03,182 | INFO     | [data] control thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:03,493 | INFO     | [data] copytool_out thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:03,586 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:03,589 | INFO     | [data] copytool_in thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:03,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 16:18:33] 2026-03-07 15:18:07,649 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 16:18:33] 2026-03-07 15:18:16,246 | INFO     | [monitor] cgroup control has ended
[2026-03-07 16:18:33] 2026-03-07 15:18:17,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140418425202496)>', '<ExcThread(monitor, started 140417915942656)>']
[2026-03-07 16:18:33] 2026-03-07 15:18:22,726 | INFO     | all workflow threads have been joined
[2026-03-07 16:18:33] 2026-03-07 15:18:22,726 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 16:18:33] 2026-03-07 15:18:22,726 | INFO     | traces error code: 0
[2026-03-07 16:18:33] 2026-03-07 15:18:22,727 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 16:18:33] 2026-03-07 15:18:32,632 | INFO     | PID=3013836 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 16:18:33] 2026-03-07 15:18:32,632 | INFO     | .. there are 8 such processes running
[2026-03-07 16:18:33] 2026-03-07 15:18:32,633 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 16:18:33] 2026-03-07 15:18:32,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 16:18:33] 2026-03-07 15:18:32,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 16:18:33] 2026-03-07 15:18:32,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 16:18:33] 2026-03-07 15:18:32,633 | INFO     | [monitor] control thread has ended
[2026-03-07 16:18:33] 2026-03-07 15:18:32,828 [wrapper] ==== pilot stdout END ====
[2026-03-07 16:18:33] 2026-03-07 15:18:32,832 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 16:18:33] 2026-03-07 15:18:32,836 [wrapper] pilotpid: 3013836
[2026-03-07 16:18:33] 2026-03-07 15:18:32,840 [wrapper] Pilot exit status: 0
[2026-03-07 16:18:33] 2026-03-07 15:18:32,854 [wrapper] pandaids: 7039030603
[2026-03-07 16:18:33] 2026-03-07 15:18:32,942 [wrapper] cleanup supervisor_pilot 3125935 3013837
[2026-03-07 16:18:33] 2026-03-07 15:18:32,946 [wrapper] Test setup, not cleaning
[2026-03-07 16:18:33] 2026-03-07 15:18:32,949 [wrapper] apfmon messages muted
[2026-03-07 16:18:33] 2026-03-07 15:18:32,953 [wrapper] ==== wrapper stdout END ====
[2026-03-07 16:18:33] 2026-03-07 15:18:32,956 [wrapper] ==== wrapper stderr END ====
[2026-03-07 16:18:33]  *** Error codes and diagnostics ***
[2026-03-07 16:18:33]     "exeErrorCode": 0,
[2026-03-07 16:18:33]     "exeErrorDiag": "",
[2026-03-07 16:18:33]     "pilotErrorCode": 0,
[2026-03-07 16:18:33]     "pilotErrorDiag": "",
[2026-03-07 16:18:33]  *** Listing of results directory ***
[2026-03-07 16:18:33] total 606268
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc    584627 Mar  7 06:09 pilot3.tar.gz
[2026-03-07 16:18:33] -rwx------ 1 boinc boinc     36322 Mar  7 06:36 runpilot2-wrapper.sh
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc      5111 Mar  7 06:37 queuedata.json
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc       100 Mar  7 15:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 16:18:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 15:28 run_atlas
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc       105 Mar  7 15:28 job.xml
[2026-03-07 16:18:33] -rw-r--r-- 2 boinc boinc 439606525 Mar  7 15:28 EVNT.46701403._001178.pool.root.1
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc      6677 Mar  7 15:28 init_data.xml
[2026-03-07 16:18:33] -rw-r--r-- 2 boinc boinc     15845 Mar  7 15:28 start_atlas.sh
[2026-03-07 16:18:33] drwxrwx--x 2 boinc boinc      4096 Mar  7 15:28 shared
[2026-03-07 16:18:33] -rw-r--r-- 2 boinc boinc    597959 Mar  7 15:28 input.tar.gz
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc         0 Mar  7 15:28 boinc_lockfile
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc      2561 Mar  7 15:28 pandaJob.out
[2026-03-07 16:18:33] -rw------- 1 boinc boinc    999177 Mar  7 15:29 agis_schedconf.cvmfs.json
[2026-03-07 16:18:33] -rw------- 1 boinc boinc   1521291 Mar  7 15:29 agis_ddmendpoints.agis.ALL.json
[2026-03-07 16:18:33] -rw------- 1 boinc boinc       436 Mar  7 15:29 workernode_map.json
[2026-03-07 16:18:33] drwx------ 5 boinc boinc      4096 Mar  7 15:29 pilot3
[2026-03-07 16:18:33] -rw------- 1 boinc boinc 175598862 Mar  7 16:17 HITS.48955010._008892.pool.root.1
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc       531 Mar  7 16:17 boinc_task_state.xml
[2026-03-07 16:18:33] -rw------- 1 boinc boinc      1023 Mar  7 16:17 memory_monitor_summary.json
[2026-03-07 16:18:33] -rw------- 1 boinc boinc    392577 Mar  7 16:17 log.48955010._008892.job.log.tgz.1
[2026-03-07 16:18:33] -rw------- 1 boinc boinc      6341 Mar  7 16:17 heartbeat.json
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc      8192 Mar  7 16:18 boinc_mmap_file
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc        27 Mar  7 16:18 wrapper_checkpoint.txt
[2026-03-07 16:18:33] -rw------- 1 boinc boinc       822 Mar  7 16:18 pilotlog.txt
[2026-03-07 16:18:33] -rw------- 1 boinc boinc        95 Mar  7 16:18 pilot_heartbeat.json
[2026-03-07 16:18:33] -rw------- 1 boinc boinc    447982 Mar  7 16:18 log.48955010._008892.job.log.1
[2026-03-07 16:18:33] -rw------- 1 boinc boinc       357 Mar  7 16:18 output.list
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc       620 Mar  7 16:18 runtime_log
[2026-03-07 16:18:33] -rw------- 1 boinc boinc    860160 Mar  7 16:18 result.tar.gz
[2026-03-07 16:18:33] -rw------- 1 boinc boinc       663 Mar  7 16:18 yv6NDmOWzI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrsULDm8Juh8m.diag
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc      8879 Mar  7 16:18 runtime_log.err
[2026-03-07 16:18:33] -rw-r--r-- 1 boinc boinc     21540 Mar  7 16:18 stderr.txt
[2026-03-07 16:18:33] HITS file was successfully produced:
[2026-03-07 16:18:33] -rw------- 1 boinc boinc 175598862 Mar  7 16:17 shared/HITS.pool.root.1
[2026-03-07 16:18:33]  *** Contents of shared directory: ***
[2026-03-07 16:18:33] total 602236
[2026-03-07 16:18:33] -rw-r--r-- 2 boinc boinc 439606525 Mar  7 15:28 ATLAS.root_0
[2026-03-07 16:18:33] -rw-r--r-- 2 boinc boinc     15845 Mar  7 15:28 start_atlas.sh
[2026-03-07 16:18:33] -rw-r--r-- 2 boinc boinc    597959 Mar  7 15:28 input.tar.gz
[2026-03-07 16:18:33] -rw------- 1 boinc boinc 175598862 Mar  7 16:17 HITS.pool.root.1
[2026-03-07 16:18:33] -rw------- 1 boinc boinc    860160 Mar  7 16:18 result.tar.gz
16:18:34 (3009594): run_atlas exited; CPU time 30839.747031
16:18:34 (3009594): called boinc_finish(0)

</stderr_txt>
]]>

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