Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:16:54 (1560950): wrapper (7.7.26015): starting
14:16:54 (1560950): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 14:16:54] Arguments: --nthreads 4
[2026-03-08 14:16:54] Threads: 4
[2026-03-08 14:16:54] Checking for CVMFS
[2026-03-08 14:16:54] No cvmfs_config command found, will try listing directly
[2026-03-08 14:16:54] CVMFS is ok
[2026-03-08 14:16:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 14:16:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 14:16:54] Further information can be found at the LHC@home message board.
[2026-03-08 14:16:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 14:16:54] Checking for apptainer binary...
[2026-03-08 14:16:54] which: no apptainer in ((null))
[2026-03-08 14:16:54] apptainer is not installed, using version from CVMFS
[2026-03-08 14:16:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 14:16:54] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut22.grid.cesnet.cz
[2026-03-08 14:16:54] apptainer works
[2026-03-08 14:16:54] Set ATHENA_PROC_NUMBER=4
[2026-03-08 14:16:54] Set ATHENA_CORE_NUMBER=4
[2026-03-08 14:16:54] Starting ATLAS job with PandaID=7039031132
[2026-03-08 14:16:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 15:36:21]  *** The last 200 lines of the pilot log: ***
[2026-03-08 15:36:21]  is_tar=False
[2026-03-08 15:36:21]  lfn=log.48955015._006186.job.log.tgz.1
[2026-03-08 15:36:21]  mtime=0
[2026-03-08 15:36:21]  protocol_id=None
[2026-03-08 15:36:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 15:36:21]  replicas=None
[2026-03-08 15:36:21]  scope=mc23_13p6TeV
[2026-03-08 15:36:21]  status=None
[2026-03-08 15:36:21]  status_code=0
[2026-03-08 15:36:21]  storage_token=
[2026-03-08 15:36:21]  surl=/var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039031132/log.48955015._006186.job.log.tgz.1
[2026-03-08 15:36:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/a9/log.48955015._006186.job.log.tgz.1
[2026-03-08 15:36:21]  workdir=None
[2026-03-08 15:36:21] ]
[2026-03-08 15:36:21] 2026-03-08 14:35:26,880 | INFO     | transferring file log.48955015._006186.job.log.tgz.1 from /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039031132/log.48955015._006186.job.log.tgz.1 to /var/lib/
[2026-03-08 15:36:21] 2026-03-08 14:35:26,881 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039031132/log.48955015._006186.job.log.tgz.1 /var/lib/boinc/var/slot236/slots/0/
[2026-03-08 15:36:21] 2026-03-08 14:35:26,897 | INFO     | adding to output.list: log.48955015._006186.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/a9/log.48955015._006186.job.log.tg
[2026-03-08 15:36:21] 2026-03-08 14:35:26,898 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 15:36:21] 2026-03-08 14:35:26,898 | INFO     | summary of transferred files:
[2026-03-08 15:36:21] 2026-03-08 14:35:26,898 | INFO     |  -- lfn=log.48955015._006186.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 15:36:21] 2026-03-08 14:35:26,898 | INFO     | stage-out finished correctly
[2026-03-08 15:36:21] 2026-03-08 14:35:27,864 | INFO     | time since job start (4700s) is within the limit (349056.0s)
[2026-03-08 15:36:21] 2026-03-08 14:35:28,513 | INFO     | monitor loop #338: job 0:7039031132 is in state 'finished'
[2026-03-08 15:36:21] 2026-03-08 14:35:28,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 15:36:21] 2026-03-08 14:35:29,871 | INFO     | time since job start (4702s) is within the limit (349056.0s)
[2026-03-08 15:36:21] 2026-03-08 14:35:30,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 15:36:21] 2026-03-08 14:35:31,019 | INFO     | monitor loop #339: job 0:7039031132 is in state 'finished'
[2026-03-08 15:36:21] 2026-03-08 14:35:31,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 15:36:21] 2026-03-08 14:35:31,876 | INFO     | time since job start (4704s) is within the limit (349056.0s)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,210 | INFO     | job 7039031132 has state=finished
[2026-03-08 15:36:21] 2026-03-08 14:35:32,210 | INFO     | preparing for final server update for job 7039031132 in state='finished'
[2026-03-08 15:36:21] 2026-03-08 14:35:32,211 | INFO     | reading metadata from: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039031132/jobReport.json
[2026-03-08 15:36:21] 2026-03-08 14:35:32,212 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot236/slots/0/workernode_map.json
[2026-03-08 15:36:21] 2026-03-08 14:35:32,212 | INFO     | this job has now completed (state=finished)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,213 | INFO     | log transfer has been attempted: DONE
[2026-03-08 15:36:21] 2026-03-08 14:35:32,213 | INFO     | job 7039031132 has finished - writing final server update
[2026-03-08 15:36:21] 2026-03-08 14:35:32,213 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_391459/.job.ad'
[2026-03-08 15:36:21] 2026-03-08 14:35:32,213 | INFO     | total number of processed events: 400 (read)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,231 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/PanDA_Pilot-7039031132/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,231 | INFO     | extracted standard info from prmon json
[2026-03-08 15:36:21] 2026-03-08 14:35:32,231 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 15:36:21] 2026-03-08 14:35:32,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 15:36:21] 2026-03-08 14:35:32,231 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 15:36:21] 2026-03-08 14:35:32,231 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 15:36:21] 2026-03-08 14:35:32,232 | INFO     | fitting pss+swap vs Time
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | sum of square deviations: 106336877.5
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | sum of deviations: -926401326.9999999
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | mean x: 1772978257.5
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | mean y: 2349411.9142857143
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | intersect: 15448443458.545921
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | chi2: 0.0003350297385623074
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | current memory leak: -8.71 B/s (using 70 data points, chi2=0.00)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | could have reported an average CPU frequency of 3592 MHz (6 samples)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | ..............................
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | . Timing measurements:
[2026-03-08 15:36:21] 2026-03-08 14:35:32,233 | INFO     | . get job = 0 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,234 | INFO     | . initial setup = 5 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,234 | INFO     | . payload setup = 5 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,234 | INFO     | . stage-in = 0 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,234 | INFO     | . payload execution = 4679 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,234 | INFO     | . stage-out = 0 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,234 | INFO     | . log creation = 0 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,234 | INFO     | ..............................
[2026-03-08 15:36:21] 2026-03-08 14:35:32,285 | INFO     | 
[2026-03-08 15:36:21] 2026-03-08 14:35:32,285 | INFO     | job summary report
[2026-03-08 15:36:21] 2026-03-08 14:35:32,285 | INFO     | --------------------------------------------------
[2026-03-08 15:36:21] 2026-03-08 14:35:32,285 | INFO     | PanDA job id: 7039031132
[2026-03-08 15:36:21] 2026-03-08 14:35:32,285 | INFO     | task id: 48955015
[2026-03-08 15:36:21] 2026-03-08 14:35:32,285 | INFO     | errors: (none)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,285 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | pilot state: finished 
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | transexitcode: 0
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | exeerrorcode: 0
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | exeerrordiag: 
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | exitcode: 0
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | exitmsg: OK
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | cpuconsumptiontime: 17830 s
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | nevents: 400
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | neventsw: 0
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | pid: 1571702
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | pgrp: 1571702
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | corecount: 4
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | event service: False
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | sizes: {0: 2295559, 1: 2295821, 11: 2295849, 4688: 2322133, 4689: 2331155, 4692: 2331211, 4694: 2331533}
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | --------------------------------------------------
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | 
[2026-03-08 15:36:21] 2026-03-08 14:35:32,286 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,304 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,304 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 15:36:21] 2026-03-08 14:35:32,304 | INFO     | job 7039031132 has completed (purged errors)
[2026-03-08 15:36:21] 2026-03-08 14:35:32,304 | INFO     | overall cleanup function is called
[2026-03-08 15:36:21] 2026-03-08 14:35:33,311 | INFO     | --- collectZombieJob: --- 10, [1571702]
[2026-03-08 15:36:21] 2026-03-08 14:35:33,311 | INFO     | zombie collector waiting for pid 1571702
[2026-03-08 15:36:21] 2026-03-08 14:35:33,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 15:36:21] 2026-03-08 14:35:33,311 | INFO     | collected zombie processes
[2026-03-08 15:36:21] 2026-03-08 14:35:33,311 | INFO     | will attempt to kill all subprocesses of pid=1571702
[2026-03-08 15:36:21] 2026-03-08 14:35:33,780 | INFO     | process IDs to be killed: [1571702] (in reverse order)
[2026-03-08 15:36:21] 2026-03-08 14:35:34,031 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 15:36:21] 2026-03-08 14:35:34,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 15:36:21] 2026-03-08 14:35:34,062 | INFO     | did not find any defunct processes belonging to 1571702
[2026-03-08 15:36:21] 2026-03-08 14:35:34,090 | INFO     | did not find any defunct processes belonging to 1571702
[2026-03-08 15:36:21] 2026-03-08 14:35:34,091 | INFO     | ready for new job
[2026-03-08 15:36:21] 2026-03-08 14:35:34,091 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 15:36:21] 2026-03-08 14:35:34,092 | INFO     | **************************************
[2026-03-08 15:36:21] 2026-03-08 14:35:34,092 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 15:36:21] 2026-03-08 14:35:34,092 | INFO     | **************************************
[2026-03-08 15:36:21] 2026-03-08 14:35:34,092 | INFO     | 
[2026-03-08 15:36:21] 2026-03-08 14:35:34,098 | INFO     | architecture information:
[2026-03-08 15:36:21] 2026-03-08 14:35:34,099 | INFO     | executing command: cat /etc/os-release
[2026-03-08 15:36:21] 2026-03-08 14:35:34,113 | INFO     | cat /etc/os-release:
[2026-03-08 15:36:21] NAME="CentOS Linux"
[2026-03-08 15:36:21] VERSION="7 (Core)"
[2026-03-08 15:36:21] ID="centos"
[2026-03-08 15:36:21] ID_LIKE="rhel fedora"
[2026-03-08 15:36:21] VERSION_ID="7"
[2026-03-08 15:36:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 15:36:21] ANSI_COLOR="0;31"
[2026-03-08 15:36:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 15:36:21] HOME_URL="https://www.centos.org/"
[2026-03-08 15:36:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 15:36:21] 
[2026-03-08 15:36:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 15:36:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 15:36:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 15:36:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 15:36:21] 
[2026-03-08 15:36:21] 2026-03-08 14:35:34,113 | INFO     | **************************************
[2026-03-08 15:36:21] 2026-03-08 14:35:34,616 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-08 15:36:21] 2026-03-08 14:35:34,633 | INFO     | sufficient remaining disk space (20666384384 B)
[2026-03-08 15:36:21] 2026-03-08 14:35:34,633 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 15:36:21] 2026-03-08 14:35:34,633 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 15:36:21] 2026-03-08 14:35:34,633 | INFO     | update_server=False
[2026-03-08 15:36:21] 2026-03-08 14:35:34,633 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 15:36:21] 2026-03-08 14:35:34,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 15:36:21] 2026-03-08 14:35:34,634 | INFO     | aborting loop
[2026-03-08 15:36:21] 2026-03-08 14:35:34,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 15:36:21] 2026-03-08 14:35:34,996 | INFO     | all job control threads have been joined
[2026-03-08 15:36:21] 2026-03-08 14:35:35,505 | INFO     | all data control threads have been joined
[2026-03-08 15:36:21] 2026-03-08 14:35:35,639 | INFO     | [job] job monitor thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:35,647 | INFO     | [job] retrieve thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:35,797 | INFO     | all payload control threads have been joined
[2026-03-08 15:36:21] 2026-03-08 14:35:35,938 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:35,984 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,002 | INFO     | [job] control thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,104 | INFO     | [job] validate thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,150 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 15:36:21] 2026-03-08 14:35:36,297 | INFO     | [payload] failed_post thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,479 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,510 | INFO     | [data] control thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,657 | INFO     | [data] copytool_in thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,803 | INFO     | [payload] control thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,963 | INFO     | [data] copytool_out thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:36,984 | INFO     | [payload] validate_post thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:37,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 15:36:21] 2026-03-08 14:35:38,300 | INFO     | [job] queue monitor thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:40,156 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:35:45,311 | INFO     | job.realtimelogging is not enabled
[2026-03-08 15:36:21] 2026-03-08 14:35:46,316 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 15:36:21] 2026-03-08 14:36:05,527 | INFO     | PID=1565604 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 15:36:21] 2026-03-08 14:36:05,527 | INFO     | .. there are 48 such processes running
[2026-03-08 15:36:21] 2026-03-08 14:36:05,527 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 15:36:21] 2026-03-08 14:36:05,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 15:36:21] 2026-03-08 14:36:05,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 15:36:21] 2026-03-08 14:36:14,678 | INFO     | [monitor] cgroup control has ended
[2026-03-08 15:36:21] 2026-03-08 14:36:16,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22773080610624)>', '<ExcThread(monitor, started 22772842772224)>']
[2026-03-08 15:36:21] 2026-03-08 14:36:16,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 15:36:21] 2026-03-08 14:36:16,583 | INFO     | [monitor] control thread has ended
[2026-03-08 15:36:21] 2026-03-08 14:36:21,257 | INFO     | all workflow threads have been joined
[2026-03-08 15:36:21] 2026-03-08 14:36:21,257 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 15:36:21] 2026-03-08 14:36:21,257 | INFO     | traces error code: 0
[2026-03-08 15:36:21] 2026-03-08 14:36:21,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 15:36:21] 2026-03-08 14:36:21,390 [wrapper] ==== pilot stdout END ====
[2026-03-08 15:36:21] 2026-03-08 14:36:21,393 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 15:36:21] 2026-03-08 14:36:21,395 [wrapper] pilotpid: 1565604
[2026-03-08 15:36:21] 2026-03-08 14:36:21,397 [wrapper] Pilot exit status: 0
[2026-03-08 15:36:21] 2026-03-08 14:36:21,406 [wrapper] pandaids: 7039031132
[2026-03-08 15:36:21] 2026-03-08 14:36:21,537 [wrapper] cleanup supervisor_pilot 2217785 1565605
[2026-03-08 15:36:21] 2026-03-08 14:36:21,540 [wrapper] Test setup, not cleaning
[2026-03-08 15:36:21] 2026-03-08 14:36:21,542 [wrapper] apfmon messages muted
[2026-03-08 15:36:21] 2026-03-08 14:36:21,544 [wrapper] ==== wrapper stdout END ====
[2026-03-08 15:36:21] 2026-03-08 14:36:21,547 [wrapper] ==== wrapper stderr END ====
[2026-03-08 15:36:21]  *** Error codes and diagnostics ***
[2026-03-08 15:36:21]     "exeErrorCode": 0,
[2026-03-08 15:36:21]     "exeErrorDiag": "",
[2026-03-08 15:36:21]     "pilotErrorCode": 0,
[2026-03-08 15:36:21]     "pilotErrorDiag": "",
[2026-03-08 15:36:21]  *** Listing of results directory ***
[2026-03-08 15:36:21] total 611292
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc    584627 Mar  7 06:09 pilot3.tar.gz
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc      5111 Mar  7 06:33 queuedata.json
[2026-03-08 15:36:21] -rwx------. 1 boinc boinc     36322 Mar  7 06:34 runpilot2-wrapper.sh
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc       100 Mar  8 14:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 15:36:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 14:16 run_atlas
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc       105 Mar  8 14:16 job.xml
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc      6708 Mar  8 14:16 init_data.xml
[2026-03-08 15:36:21] -rw-r--r--. 2 boinc boinc 435078881 Mar  8 14:16 EVNT.46701403._002172.pool.root.1
[2026-03-08 15:36:21] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:16 start_atlas.sh
[2026-03-08 15:36:21] drwxrwx--x. 2 boinc boinc      4096 Mar  8 14:16 shared
[2026-03-08 15:36:21] -rw-r--r--. 2 boinc boinc    597963 Mar  8 14:16 input.tar.gz
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc         0 Mar  8 14:16 boinc_lockfile
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc      2570 Mar  8 14:16 pandaJob.out
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc    999212 Mar  8 14:17 agis_schedconf.cvmfs.json
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc   1521291 Mar  8 14:17 agis_ddmendpoints.agis.ALL.json
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc       444 Mar  8 14:17 workernode_map.json
[2026-03-08 15:36:21] drwx------. 5 boinc boinc      4096 Mar  8 14:17 pilot3
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc 184974315 Mar  8 15:35 HITS.48955015._006186.pool.root.1
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc       530 Mar  8 15:35 boinc_task_state.xml
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc      1030 Mar  8 15:35 memory_monitor_summary.json
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc        95 Mar  8 15:35 pilot_heartbeat.json
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc    296048 Mar  8 15:35 log.48955015._006186.job.log.tgz.1
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc      6356 Mar  8 15:35 heartbeat.json
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc      8192 Mar  8 15:36 boinc_mmap_file
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc        27 Mar  8 15:36 wrapper_checkpoint.txt
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc      4902 Mar  8 15:36 pilotlog.txt
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc    690288 Mar  8 15:36 log.48955015._006186.job.log.1
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc       357 Mar  8 15:36 output.list
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc       620 Mar  8 15:36 runtime_log
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc   1003520 Mar  8 15:36 result.tar.gz
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc      9221 Mar  8 15:36 runtime_log.err
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc       663 Mar  8 15:36 h5WMDmnTzI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm3cSLDmPWO4Wm.diag
[2026-03-08 15:36:21] -rw-r--r--. 1 boinc boinc     21447 Mar  8 15:36 stderr.txt
[2026-03-08 15:36:21] HITS file was successfully produced:
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc 184974315 Mar  8 15:35 shared/HITS.pool.root.1
[2026-03-08 15:36:21]  *** Contents of shared directory: ***
[2026-03-08 15:36:21] total 607112
[2026-03-08 15:36:21] -rw-r--r--. 2 boinc boinc 435078881 Mar  8 14:16 ATLAS.root_0
[2026-03-08 15:36:21] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:16 start_atlas.sh
[2026-03-08 15:36:21] -rw-r--r--. 2 boinc boinc    597963 Mar  8 14:16 input.tar.gz
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc 184974315 Mar  8 15:35 HITS.pool.root.1
[2026-03-08 15:36:21] -rw-------. 1 boinc boinc   1003520 Mar  8 15:36 result.tar.gz
15:36:22 (1560950): run_atlas exited; CPU time 18047.343778
15:36:22 (1560950): called boinc_finish(0)

</stderr_txt>
]]>

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