Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:55:02 (2926651): wrapper (7.7.26015): starting
14:55:02 (2926651): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 14:55:02] Arguments: --nthreads 12
[2026-03-07 14:55:02] Threads: 12
[2026-03-07 14:55:02] Checking for CVMFS
[2026-03-07 14:55:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 14:55:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 14:55:03] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 14:55:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 14:55:03] 2.13.3.0 8852 37162 218820 157002 2 188 40528951 46080000 6454 130560 0 133805767 99.851 49578385 25361 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-07 14:55:03] CVMFS is ok
[2026-03-07 14:55:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 14:55:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 14:55:03] Further information can be found at the LHC@home message board.
[2026-03-07 14:55:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 14:55:03] Checking for apptainer binary...
[2026-03-07 14:55:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 14:55:03] Running /usr/bin/apptainer --version
[2026-03-07 14:55:03] apptainer version 1.4.5-2.el9
[2026-03-07 14:55:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 14:55:03] mff2103.farm.particle.cz
[2026-03-07 14:55:03] apptainer works
[2026-03-07 14:55:03] Set ATHENA_PROC_NUMBER=12
[2026-03-07 14:55:03] Set ATHENA_CORE_NUMBER=12
[2026-03-07 14:55:03] Starting ATLAS job with PandaID=7039030664
[2026-03-07 14:55:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 15:44:33]  *** The last 200 lines of the pilot log: ***
[2026-03-07 15:44:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/98/log.48955010._008953.job.log.tgz.1
[2026-03-07 15:44:33]  workdir=None
[2026-03-07 15:44:33] ]
[2026-03-07 15:44:33] 2026-03-07 14:43:28,396 | INFO     | transferring file log.48955010._008953.job.log.tgz.1 from /scratch/.boinc/slots/3/PanDA_Pilot-7039030664/log.48955010._008953.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-07 15:44:33] 2026-03-07 14:43:28,396 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/3/PanDA_Pilot-7039030664/log.48955010._008953.job.log.tgz.1 /scratch/.boinc/slots/3/log.48955010._008953.j
[2026-03-07 15:44:33] 2026-03-07 14:43:28,426 | INFO     | adding to output.list: log.48955010._008953.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/06/98/log.48955010._008953.job.log.tg
[2026-03-07 15:44:33] 2026-03-07 14:43:28,428 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 15:44:33] 2026-03-07 14:43:28,428 | INFO     | summary of transferred files:
[2026-03-07 15:44:33] 2026-03-07 14:43:28,428 | INFO     |  -- lfn=log.48955010._008953.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 15:44:33] 2026-03-07 14:43:28,428 | INFO     | stage-out finished correctly
[2026-03-07 15:44:33] 2026-03-07 14:43:28,844 | INFO     | PID=2930866 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 15:44:33] 2026-03-07 14:43:28,844 | INFO     | .. there are 8 such processes running
[2026-03-07 15:44:33] 2026-03-07 14:43:29,845 | INFO     | time since job start (2887s) is within the limit (349056.0s)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,954 | WARNING  | process 2935710 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 15:44:33] 2026-03-07 14:43:30,955 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-7039030664/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,956 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-7039030664/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,956 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 15:44:33] 2026-03-07 14:43:30,956 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 15:44:33] 2026-03-07 14:43:30,957 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 5688558 B
[2026-03-07 15:44:33] 2026-03-07 14:43:30,957 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15596 B
[2026-03-07 15:44:33] 2026-03-07 14:43:30,957 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2026-03-07 15:44:33] 2026-03-07 14:43:30,992 | INFO     | sufficient remaining disk space (1674596843520 B)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,993 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,993 | INFO     | size of work directory /scratch/.boinc/slots/3/PanDA_Pilot-7039030664: 5975098 B (within 5033164800 B limit)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,994 | INFO     | pfn file=/scratch/.boinc/slots/3/PanDA_Pilot-7039030664/HITS.48955010._008953.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,994 | INFO     | total size of present files: 0 B (workdir size: 5975098 B)
[2026-03-07 15:44:33] 2026-03-07 14:43:30,994 | INFO     | output file size check: skipping output file /scratch/.boinc/slots/3/PanDA_Pilot-7039030664/HITS.48955010._008953.pool.root.1 since it does not exist
[2026-03-07 15:44:33] 2026-03-07 14:43:31,353 | INFO     | number of running child processes to parent process 2935710: 1
[2026-03-07 15:44:33] 2026-03-07 14:43:31,353 | INFO     | maximum number of monitored processes: 6
[2026-03-07 15:44:33] 2026-03-07 14:43:31,691 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 15:44:33] 2026-03-07 14:43:31,852 | INFO     | time since job start (2889s) is within the limit (349056.0s)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,249 | INFO     | job 7039030664 has state=finished
[2026-03-07 15:44:33] 2026-03-07 14:43:33,250 | INFO     | preparing for final server update for job 7039030664 in state='finished'
[2026-03-07 15:44:33] 2026-03-07 14:43:33,250 | INFO     | reading metadata from: /scratch/.boinc/slots/3/PanDA_Pilot-7039030664/jobReport.json
[2026-03-07 15:44:33] 2026-03-07 14:43:33,253 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/3/workernode_map.json
[2026-03-07 15:44:33] 2026-03-07 14:43:33,254 | INFO     | this job has now completed (state=finished)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,254 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,254 | INFO     | log transfer has been attempted: DONE
[2026-03-07 15:44:33] 2026-03-07 14:43:33,254 | INFO     | job 7039030664 has finished - writing final server update
[2026-03-07 15:44:33] 2026-03-07 14:43:33,255 | INFO     | total number of processed events: 400 (read)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,272 | INFO     | using path: /scratch/.boinc/slots/3/PanDA_Pilot-7039030664/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,272 | INFO     | extracted standard info from prmon json
[2026-03-07 15:44:33] 2026-03-07 14:43:33,273 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 15:44:33] 2026-03-07 14:43:33,273 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 15:44:33] 2026-03-07 14:43:33,273 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 15:44:33] 2026-03-07 14:43:33,273 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 15:44:33] 2026-03-07 14:43:33,274 | INFO     | fitting pss+swap vs Time
[2026-03-07 15:44:33] 2026-03-07 14:43:33,274 | INFO     | sum of square deviations: 19832930.0
[2026-03-07 15:44:33] 2026-03-07 14:43:33,275 | INFO     | sum of deviations: -431011298.99999994
[2026-03-07 15:44:33] 2026-03-07 14:43:33,275 | INFO     | mean x: 1772893241.5
[2026-03-07 15:44:33] 2026-03-07 14:43:33,275 | INFO     | mean y: 2688194.85
[2026-03-07 15:44:33] 2026-03-07 14:43:33,275 | INFO     | intersect: 38531388644.41724
[2026-03-07 15:44:33] 2026-03-07 14:43:33,275 | INFO     | chi2: 0.0018638390154417364
[2026-03-07 15:44:33] 2026-03-07 14:43:33,275 | INFO     | current memory leak: -21.73 B/s (using 40 data points, chi2=0.00)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,275 | INFO     | could have reported an average CPU frequency of 2778 MHz (5 samples)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | ..............................
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . Timing measurements:
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . get job = 0 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . initial setup = 7 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . payload setup = 7 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . stage-in = 0 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . payload execution = 2863 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . stage-out = 0 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | . log creation = 0 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,276 | INFO     | ..............................
[2026-03-07 15:44:33] 2026-03-07 14:43:33,370 | INFO     | 
[2026-03-07 15:44:33] 2026-03-07 14:43:33,370 | INFO     | job summary report
[2026-03-07 15:44:33] 2026-03-07 14:43:33,370 | INFO     | --------------------------------------------------
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | PanDA job id: 7039030664
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | task id: 48955010
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | errors: (none)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | pilot state: finished 
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | transexitcode: 0
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | exeerrorcode: 0
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | exeerrordiag: 
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | exitcode: 0
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | exitmsg: OK
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | cpuconsumptiontime: 30177 s
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | nevents: 400
[2026-03-07 15:44:33] 2026-03-07 14:43:33,371 | INFO     | neventsw: 0
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | pid: 2935710
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | pgrp: 2935710
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | corecount: 12
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | event service: False
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | sizes: {0: 2295751, 11: 2295751, 2873: 2321187, 2874: 2330187, 2878: 2330271, 2879: 2330497}
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | --------------------------------------------------
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | 
[2026-03-07 15:44:33] 2026-03-07 14:43:33,372 | INFO     | executing command: ls -lF /scratch/.boinc/slots/3
[2026-03-07 15:44:33] 2026-03-07 14:43:33,402 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,402 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,402 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,402 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,402 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,404 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,404 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 15:44:33] 2026-03-07 14:43:33,404 | INFO     | job 7039030664 has completed (purged errors)
[2026-03-07 15:44:33] 2026-03-07 14:43:33,404 | INFO     | overall cleanup function is called
[2026-03-07 15:44:33] 2026-03-07 14:43:34,414 | INFO     | --- collectZombieJob: --- 10, [2935710]
[2026-03-07 15:44:33] 2026-03-07 14:43:34,414 | INFO     | zombie collector waiting for pid 2935710
[2026-03-07 15:44:33] 2026-03-07 14:43:34,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 15:44:33] 2026-03-07 14:43:34,414 | INFO     | collected zombie processes
[2026-03-07 15:44:33] 2026-03-07 14:43:34,414 | INFO     | will attempt to kill all subprocesses of pid=2935710
[2026-03-07 15:44:33] 2026-03-07 14:43:34,762 | INFO     | process IDs to be killed: [2935710] (in reverse order)
[2026-03-07 15:44:33] 2026-03-07 14:43:34,886 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 15:44:33] 2026-03-07 14:43:34,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 15:44:33] 2026-03-07 14:43:34,899 | INFO     | did not find any defunct processes belonging to 2935710
[2026-03-07 15:44:33] 2026-03-07 14:43:34,910 | INFO     | did not find any defunct processes belonging to 2935710
[2026-03-07 15:44:33] 2026-03-07 14:43:34,911 | INFO     | ready for new job
[2026-03-07 15:44:33] 2026-03-07 14:43:34,911 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 15:44:33] 2026-03-07 14:43:34,913 | INFO     | **************************************
[2026-03-07 15:44:33] 2026-03-07 14:43:34,913 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 15:44:33] 2026-03-07 14:43:34,913 | INFO     | **************************************
[2026-03-07 15:44:33] 2026-03-07 14:43:34,913 | INFO     | 
[2026-03-07 15:44:33] 2026-03-07 14:43:34,919 | INFO     | architecture information:
[2026-03-07 15:44:33] 2026-03-07 14:43:34,920 | INFO     | executing command: cat /etc/os-release
[2026-03-07 15:44:33] 2026-03-07 14:43:34,943 | INFO     | cat /etc/os-release:
[2026-03-07 15:44:33] NAME="CentOS Linux"
[2026-03-07 15:44:33] VERSION="7 (Core)"
[2026-03-07 15:44:33] ID="centos"
[2026-03-07 15:44:33] ID_LIKE="rhel fedora"
[2026-03-07 15:44:33] VERSION_ID="7"
[2026-03-07 15:44:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 15:44:33] ANSI_COLOR="0;31"
[2026-03-07 15:44:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 15:44:33] HOME_URL="https://www.centos.org/"
[2026-03-07 15:44:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 15:44:33] 
[2026-03-07 15:44:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 15:44:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 15:44:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 15:44:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 15:44:33] 
[2026-03-07 15:44:33] 2026-03-07 14:43:34,943 | INFO     | **************************************
[2026-03-07 15:44:33] 2026-03-07 14:43:35,447 | INFO     | executing command: df -mP /scratch/.boinc/slots/3
[2026-03-07 15:44:33] 2026-03-07 14:43:35,473 | INFO     | sufficient remaining disk space (1674602086400 B)
[2026-03-07 15:44:33] 2026-03-07 14:43:35,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 15:44:33] 2026-03-07 14:43:35,474 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 15:44:33] 2026-03-07 14:43:35,474 | INFO     | update_server=False
[2026-03-07 15:44:33] 2026-03-07 14:43:35,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 15:44:33] 2026-03-07 14:43:35,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 15:44:33] 2026-03-07 14:43:35,475 | INFO     | aborting loop
[2026-03-07 15:44:33] 2026-03-07 14:43:35,494 | INFO     | all job control threads have been joined
[2026-03-07 15:44:33] 2026-03-07 14:43:36,281 | INFO     | all data control threads have been joined
[2026-03-07 15:44:33] 2026-03-07 14:43:36,411 | INFO     | all payload control threads have been joined
[2026-03-07 15:44:33] 2026-03-07 14:43:36,480 | INFO     | [job] retrieve thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:36,480 | INFO     | [job] job monitor thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:36,499 | INFO     | [job] control thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:36,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 15:44:33] 2026-03-07 14:43:36,563 | INFO     | [payload] validate_post thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:36,859 | INFO     | [job] validate thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,184 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,286 | INFO     | [data] control thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,294 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,416 | INFO     | [payload] control thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,480 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,619 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,622 | INFO     | [payload] failed_post thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,711 | INFO     | [data] copytool_in thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:37,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 15:44:33] 2026-03-07 14:43:38,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 15:44:33] 2026-03-07 14:43:38,547 | INFO     | [data] copytool_out thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:39,387 | INFO     | [job] queue monitor thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:43:41,807 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 15:44:33] 2026-03-07 14:44:05,365 | INFO     | PID=2930866 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 15:44:33] 2026-03-07 14:44:05,365 | INFO     | .. there are 8 such processes running
[2026-03-07 15:44:33] 2026-03-07 14:44:05,366 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 15:44:33] 2026-03-07 14:44:05,366 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 15:44:33] 2026-03-07 14:44:05,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 15:44:33] 2026-03-07 14:44:26,704 | INFO     | [monitor] cgroup control has ended
[2026-03-07 15:44:33] 2026-03-07 14:44:27,933 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140129189959488)>', '<ExcThread(monitor, started 140128836101888)>']
[2026-03-07 15:44:33] 2026-03-07 14:44:28,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 15:44:33] 2026-03-07 14:44:28,461 | INFO     | [monitor] control thread has ended
[2026-03-07 15:44:33] 2026-03-07 14:44:32,954 | INFO     | all workflow threads have been joined
[2026-03-07 15:44:33] 2026-03-07 14:44:32,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 15:44:33] 2026-03-07 14:44:32,955 | INFO     | traces error code: 0
[2026-03-07 15:44:33] 2026-03-07 14:44:32,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 15:44:33] 2026-03-07 14:44:33,110 [wrapper] ==== pilot stdout END ====
[2026-03-07 15:44:33] 2026-03-07 14:44:33,114 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 15:44:33] 2026-03-07 14:44:33,118 [wrapper] pilotpid: 2930866
[2026-03-07 15:44:33] 2026-03-07 14:44:33,122 [wrapper] Pilot exit status: 0
[2026-03-07 15:44:33] 2026-03-07 14:44:33,136 [wrapper] pandaids: 7039030664
[2026-03-07 15:44:33] 2026-03-07 14:44:33,221 [wrapper] cleanup supervisor_pilot 3056617 2930867
[2026-03-07 15:44:33] 2026-03-07 14:44:33,225 [wrapper] Test setup, not cleaning
[2026-03-07 15:44:33] 2026-03-07 14:44:33,229 [wrapper] apfmon messages muted
[2026-03-07 15:44:33] 2026-03-07 14:44:33,234 [wrapper] ==== wrapper stdout END ====
[2026-03-07 15:44:33] 2026-03-07 14:44:33,237 [wrapper] ==== wrapper stderr END ====
[2026-03-07 15:44:33]  *** Error codes and diagnostics ***
[2026-03-07 15:44:33]     "exeErrorCode": 0,
[2026-03-07 15:44:33]     "exeErrorDiag": "",
[2026-03-07 15:44:33]     "pilotErrorCode": 0,
[2026-03-07 15:44:33]     "pilotErrorDiag": "",
[2026-03-07 15:44:33]  *** Listing of results directory ***
[2026-03-07 15:44:33] total 610820
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc    584627 Mar  7 06:09 pilot3.tar.gz
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc      5111 Mar  7 06:33 queuedata.json
[2026-03-07 15:44:33] -rwx------ 1 boinc boinc     36322 Mar  7 06:33 runpilot2-wrapper.sh
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc       100 Mar  7 14:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 15:44:33] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 14:55 run_atlas
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc       105 Mar  7 14:55 job.xml
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc      6677 Mar  7 14:55 init_data.xml
[2026-03-07 15:44:33] -rw-r--r-- 2 boinc boinc 443506532 Mar  7 14:55 EVNT.46701403._001179.pool.root.1
[2026-03-07 15:44:33] -rw-r--r-- 2 boinc boinc     15845 Mar  7 14:55 start_atlas.sh
[2026-03-07 15:44:33] drwxrwx--x 2 boinc boinc      4096 Mar  7 14:55 shared
[2026-03-07 15:44:33] -rw-r--r-- 2 boinc boinc    597955 Mar  7 14:55 input.tar.gz
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc         0 Mar  7 14:55 boinc_lockfile
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc      2561 Mar  7 14:55 pandaJob.out
[2026-03-07 15:44:33] -rw------- 1 boinc boinc    999177 Mar  7 14:55 agis_schedconf.cvmfs.json
[2026-03-07 15:44:33] -rw------- 1 boinc boinc   1521291 Mar  7 14:55 agis_ddmendpoints.agis.ALL.json
[2026-03-07 15:44:33] -rw------- 1 boinc boinc       436 Mar  7 14:55 workernode_map.json
[2026-03-07 15:44:33] drwx------ 5 boinc boinc      4096 Mar  7 14:55 pilot3
[2026-03-07 15:44:33] -rw------- 1 boinc boinc 176345964 Mar  7 15:42 HITS.48955010._008953.pool.root.1
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc       530 Mar  7 15:42 boinc_task_state.xml
[2026-03-07 15:44:33] -rw------- 1 boinc boinc        95 Mar  7 15:43 pilot_heartbeat.json
[2026-03-07 15:44:33] -rw------- 1 boinc boinc      1024 Mar  7 15:43 memory_monitor_summary.json
[2026-03-07 15:44:33] -rw------- 1 boinc boinc    403256 Mar  7 15:43 log.48955010._008953.job.log.tgz.1
[2026-03-07 15:44:33] -rw------- 1 boinc boinc      6347 Mar  7 15:43 heartbeat.json
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc        27 Mar  7 15:44 wrapper_checkpoint.txt
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc      8192 Mar  7 15:44 boinc_mmap_file
[2026-03-07 15:44:33] -rw------- 1 boinc boinc      4822 Mar  7 15:44 pilotlog.txt
[2026-03-07 15:44:33] -rw------- 1 boinc boinc    443728 Mar  7 15:44 log.48955010._008953.job.log.1
[2026-03-07 15:44:33] -rw------- 1 boinc boinc       357 Mar  7 15:44 output.list
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc       620 Mar  7 15:44 runtime_log
[2026-03-07 15:44:33] -rw------- 1 boinc boinc    860160 Mar  7 15:44 result.tar.gz
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc      8879 Mar  7 15:44 runtime_log.err
[2026-03-07 15:44:33] -rw------- 1 boinc boinc       662 Mar  7 15:44 jI7MDmaTzI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmRaSLDmBZGrIo.diag
[2026-03-07 15:44:33] -rw-r--r-- 1 boinc boinc     22705 Mar  7 15:44 stderr.txt
[2026-03-07 15:44:33] HITS file was successfully produced:
[2026-03-07 15:44:33] -rw------- 1 boinc boinc 176345964 Mar  7 15:42 shared/HITS.pool.root.1
[2026-03-07 15:44:33]  *** Contents of shared directory: ***
[2026-03-07 15:44:33] total 606776
[2026-03-07 15:44:33] -rw-r--r-- 2 boinc boinc 443506532 Mar  7 14:55 ATLAS.root_0
[2026-03-07 15:44:33] -rw-r--r-- 2 boinc boinc     15845 Mar  7 14:55 start_atlas.sh
[2026-03-07 15:44:33] -rw-r--r-- 2 boinc boinc    597955 Mar  7 14:55 input.tar.gz
[2026-03-07 15:44:33] -rw------- 1 boinc boinc 176345964 Mar  7 15:42 HITS.pool.root.1
[2026-03-07 15:44:33] -rw------- 1 boinc boinc    860160 Mar  7 15:44 result.tar.gz
15:44:35 (2926651): run_atlas exited; CPU time 30244.892304
15:44:35 (2926651): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN