Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:37 (1328832): wrapper (7.7.26015): starting
21:23:37 (1328832): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 21:23:37] Arguments: --nthreads 12
[2026-03-06 21:23:37] Threads: 12
[2026-03-06 21:23:37] Checking for CVMFS
[2026-03-06 21:23:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 21:23:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 21:23:39] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 21:23:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 21:23:40] 2.11.5.0 3857663 138222 359548 156990 0 146 27651278 45568000 23612 130560 0 798519349 99.802 482997222 17398 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-06 21:23:40] CVMFS is ok
[2026-03-06 21:23:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 21:23:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 21:23:40] Further information can be found at the LHC@home message board.
[2026-03-06 21:23:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 21:23:40] Checking for apptainer binary...
[2026-03-06 21:23:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 21:23:40] Running /usr/bin/apptainer --version
[2026-03-06 21:23:40] apptainer version 1.4.1-1.el9
[2026-03-06 21:23:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 21:23:41] wns0075.triumf.lcg
[2026-03-06 21:23:41] apptainer works
[2026-03-06 21:23:41] Set ATHENA_PROC_NUMBER=12
[2026-03-06 21:23:41] Set ATHENA_CORE_NUMBER=12
[2026-03-06 21:23:41] Starting ATLAS job with PandaID=7038635194
[2026-03-06 21:23:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 21:29:58]  *** The last 200 lines of the pilot log: ***
[2026-03-06 21:29:58] 2026-03-07 05:29:14,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 21:29:58] 2026-03-07 05:29:14,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 21:29:58] 2026-03-07 05:29:14,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 21:29:58] 2026-03-07 05:29:14,669 | WARNING  | wrong length of table data, x=[1772861158.0, 1772861219.0], y=[1923.0, 464558.0] (must be same and length>=4)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,669 | INFO     | could have reported an average CPU frequency of 1349 MHz (4 samples)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | ..............................
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . Timing measurements:
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . get job = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . initial setup = 26 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . payload setup = 34 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . stage-in = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . payload execution = 99 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . stage-out = 1 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | . log creation = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | ..............................
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038635194/pilotlog.txt
[2026-03-06 21:29:58] 2026-03-07 05:29:14,791 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 21:29:58] - Log from pilotlog.txt -
[2026-03-06 21:29:58] 2026-03-07 05:29:14,658 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038635194/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,659 | INFO     | extracted standard info from prmon json
[2026-03-06 21:29:58] 2026-03-07 05:29:14,659 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 21:29:58] 2026-03-07 05:29:14,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 21:29:58] 2026-03-07 05:29:14,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 21:29:58] 2026-03-07 05:29:14,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 21:29:58] 2026-03-07 05:29:14,669 | WARNING  | wrong length of table data, x=[1772861158.0, 1772861219.0], y=[1923.0, 464558.0] (must be same and length>=4)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,669 | INFO     | could have reported an average CPU frequency of 1349 MHz (4 samples)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | ..............................
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . Timing measurements:
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . get job = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . initial setup = 26 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . payload setup = 34 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . stage-in = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . payload execution = 99 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . stage-out = 1 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | . log creation = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | ..............................
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038635194/pilotlog.txt
[2026-03-06 21:29:58] 2026-03-07 05:29:14,792 | WARNING  | 
[2026-03-06 21:29:58] [begin log extracts]
[2026-03-06 21:29:58] - Log from pilotlog.txt -
[2026-03-06 21:29:58] 2026-03-07 05:29:14,658 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7038635194/memory_monitor_summary.json (trf name=prmon)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,659 | INFO     | extracted standard info from prmon json
[2026-03-06 21:29:58] 2026-03-07 05:29:14,659 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 21:29:58] 2026-03-07 05:29:14,659 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 21:29:58] 2026-03-07 05:29:14,660 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 21:29:58] 2026-03-07 05:29:14,660 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 21:29:58] 2026-03-07 05:29:14,669 | WARNING  | wrong length of table data, x=[1772861158.0, 1772861219.0], y=[1923.0, 464558.0] (must be same and length>=4)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,669 | INFO     | could have reported an average CPU frequency of 1349 MHz (4 samples)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | ..............................
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . Timing measurements:
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . get job = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . initial setup = 26 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . payload setup = 34 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . stage-in = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . payload execution = 99 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,670 | INFO     | . stage-out = 1 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | . log creation = 0 s
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | ..............................
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:29:58] 2026-03-07 05:29:14,671 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7038635194/pilotlog.txt
[2026-03-06 21:29:58] [end log extracts]
[2026-03-06 21:29:58] 2026-03-07 05:29:14,792 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 21:29:58] 2026-03-07 05:29:14,794 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 21:29:58] 2026-03-07 05:29:15,189 | INFO     | 
[2026-03-06 21:29:58] 2026-03-07 05:29:15,189 | INFO     | job summary report
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | --------------------------------------------------
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | PanDA job id: 7038635194
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | task id: 48955006
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 21:26:59,333 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | pilot state: failed 
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | transexitcode: 65
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | exeerrorcode: 65
[2026-03-06 21:29:58] 2026-03-07 05:29:15,190 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | exitcode: 65
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | cpuconsumptiontime: 26 s
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | nevents: 0
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | neventsw: 0
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | pid: 1347805
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | pgrp: 1347805
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | corecount: 12
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | event service: False
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | sizes: {0: 2295307, 1: 2295824, 2: 2295852, 138: 2319092, 139: 2319068, 141: 2323388, 145: 2323544, 262: 2323710}
[2026-03-06 21:29:58] 2026-03-07 05:29:15,191 | INFO     | --------------------------------------------------
[2026-03-06 21:29:58] 2026-03-07 05:29:15,192 | INFO     | 
[2026-03-06 21:29:58] 2026-03-07 05:29:15,192 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-06 21:29:58] 2026-03-07 05:29:15,387 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,388 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,388 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,388 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 21:29:58] 2026-03-07 05:29:15,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,390 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 21:29:58] 2026-03-07 05:29:15,390 | INFO     | job 7038635194 has completed (purged errors)
[2026-03-06 21:29:58] 2026-03-07 05:29:15,391 | INFO     | overall cleanup function is called
[2026-03-06 21:29:58] 2026-03-07 05:29:16,419 | INFO     | --- collectZombieJob: --- 10, [1347805]
[2026-03-06 21:29:58] 2026-03-07 05:29:16,419 | INFO     | zombie collector waiting for pid 1347805
[2026-03-06 21:29:58] 2026-03-07 05:29:16,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 21:29:58] 2026-03-07 05:29:16,421 | INFO     | collected zombie processes
[2026-03-06 21:29:58] 2026-03-07 05:29:16,421 | INFO     | will attempt to kill all subprocesses of pid=1347805
[2026-03-06 21:29:58] 2026-03-07 05:29:18,364 | INFO     | process IDs to be killed: [1347805] (in reverse order)
[2026-03-06 21:29:58] 2026-03-07 05:29:18,972 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 21:29:58] 2026-03-07 05:29:18,972 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 21:29:58] 2026-03-07 05:29:19,044 | INFO     | did not find any defunct processes belonging to 1347805
[2026-03-06 21:29:58] 2026-03-07 05:29:19,079 | INFO     | did not find any defunct processes belonging to 1347805
[2026-03-06 21:29:58] 2026-03-07 05:29:19,080 | INFO     | ready for new job
[2026-03-06 21:29:58] 2026-03-07 05:29:19,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 21:29:58] 2026-03-07 05:29:19,093 | INFO     | **************************************
[2026-03-06 21:29:58] 2026-03-07 05:29:19,093 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 21:29:58] 2026-03-07 05:29:19,093 | INFO     | **************************************
[2026-03-06 21:29:58] 2026-03-07 05:29:19,094 | INFO     | 
[2026-03-06 21:29:58] 2026-03-07 05:29:19,108 | INFO     | architecture information:
[2026-03-06 21:29:58] 2026-03-07 05:29:19,116 | INFO     | executing command: cat /etc/os-release
[2026-03-06 21:29:58] 2026-03-07 05:29:19,231 | INFO     | cat /etc/os-release:
[2026-03-06 21:29:58] NAME="CentOS Linux"
[2026-03-06 21:29:58] VERSION="7 (Core)"
[2026-03-06 21:29:58] ID="centos"
[2026-03-06 21:29:58] ID_LIKE="rhel fedora"
[2026-03-06 21:29:58] VERSION_ID="7"
[2026-03-06 21:29:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 21:29:58] ANSI_COLOR="0;31"
[2026-03-06 21:29:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 21:29:58] HOME_URL="https://www.centos.org/"
[2026-03-06 21:29:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 21:29:58] 
[2026-03-06 21:29:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 21:29:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 21:29:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 21:29:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 21:29:58] 
[2026-03-06 21:29:58] 2026-03-07 05:29:19,232 | INFO     | **************************************
[2026-03-06 21:29:58] 2026-03-07 05:29:19,737 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-06 21:29:58] 2026-03-07 05:29:19,894 | INFO     | sufficient remaining disk space (1970623479808 B)
[2026-03-06 21:29:58] 2026-03-07 05:29:19,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 21:29:58] 2026-03-07 05:29:19,895 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 21:29:58] 2026-03-07 05:29:19,895 | INFO     | update_server=False
[2026-03-06 21:29:58] 2026-03-07 05:29:19,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 21:29:58] 2026-03-07 05:29:19,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 21:29:58] 2026-03-07 05:29:19,896 | INFO     | aborting loop
[2026-03-06 21:29:58] 2026-03-07 05:29:20,245 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 21:29:58] 2026-03-07 05:29:20,307 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 21:29:58] 2026-03-07 05:29:20,390 | INFO     | all data control threads have been joined
[2026-03-06 21:29:58] 2026-03-07 05:29:20,462 | INFO     | all payload control threads have been joined
[2026-03-06 21:29:58] 2026-03-07 05:29:20,900 | INFO     | [job] retrieve thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:20,902 | INFO     | [job] job monitor thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:21,091 | INFO     | [job] validate thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:21,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 21:29:58] 2026-03-07 05:29:21,251 | INFO     | [job] queue monitor thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:21,396 | INFO     | [data] control thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:21,468 | INFO     | [payload] control thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:21,493 | INFO     | all job control threads have been joined
[2026-03-06 21:29:58] 2026-03-07 05:29:21,515 | INFO     | [payload] failed_post thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:21,776 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:22,003 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:22,042 | INFO     | [data] copytool_in thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:22,062 | INFO     | [payload] validate_post thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:22,165 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:22,175 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:22,314 | INFO     | [data] copytool_out thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:22,499 | INFO     | [job] control thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:25,206 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 21:29:58] 2026-03-07 05:29:47,923 | INFO     | PID=1333993 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 21:29:58] 2026-03-07 05:29:47,924 | INFO     | .. there are 35 such processes running
[2026-03-06 21:29:58] 2026-03-07 05:29:47,925 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 21:29:58] 2026-03-07 05:29:47,925 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 21:29:58] 2026-03-07 05:29:47,925 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 21:29:58] 2026-03-07 05:29:50,735 | INFO     | [monitor] cgroup control has ended
[2026-03-06 21:29:58] 2026-03-07 05:29:51,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980185220928)>', '<ExcThread(monitor, started 139979787314944)>']
[2026-03-06 21:29:58] 2026-03-07 05:29:51,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 21:29:58] 2026-03-07 05:29:51,949 | INFO     | [monitor] control thread has ended
[2026-03-06 21:29:58] 2026-03-07 05:29:56,768 | INFO     | all workflow threads have been joined
[2026-03-06 21:29:58] 2026-03-07 05:29:56,769 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 21:29:58] 2026-03-07 05:29:56,769 | INFO     | traces error code: 0
[2026-03-06 21:29:58] 2026-03-07 05:29:56,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 21:29:58] 2026-03-07 05:29:57,085 [wrapper] ==== pilot stdout END ====
[2026-03-06 21:29:58] 2026-03-07 05:29:57,120 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 21:29:58] 2026-03-07 05:29:57,130 [wrapper] pilotpid: 1333993
[2026-03-06 21:29:58] 2026-03-07 05:29:57,133 [wrapper] Pilot exit status: 0
[2026-03-06 21:29:58] 2026-03-07 05:29:57,250 [wrapper] pandaids: 7038635194
[2026-03-06 21:29:58] 2026-03-07 05:29:57,466 [wrapper] cleanup supervisor_pilot 1334005 1333994
[2026-03-06 21:29:58] 2026-03-07 05:29:57,503 [wrapper] Test setup, not cleaning
[2026-03-06 21:29:58] 2026-03-07 05:29:57,519 [wrapper] apfmon messages muted
[2026-03-06 21:29:58] 2026-03-07 05:29:57,544 [wrapper] ==== wrapper stdout END ====
[2026-03-06 21:29:58] 2026-03-07 05:29:57,603 [wrapper] ==== wrapper stderr END ====
[2026-03-06 21:29:58]  *** Error codes and diagnostics ***
[2026-03-06 21:29:58]     "exeErrorCode": 65,
[2026-03-06 21:29:58]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 21:29:58]     "pilotErrorCode": 1305,
[2026-03-06 21:29:58]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 21:29:58]  *** Listing of results directory ***
[2026-03-06 21:29:58] total 435956
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc      5111 Mar  5 05:51 queuedata.json
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc    584627 Mar  5 05:51 pilot3.tar.gz
[2026-03-06 21:29:58] -rwx------. 1 boinc boinc     36322 Mar  5 05:51 runpilot2-wrapper.sh
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc       100 Mar  6 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 21:29:58] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 21:23 run_atlas
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc       105 Mar  6 21:23 job.xml
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc      6593 Mar  6 21:23 init_data.xml
[2026-03-06 21:29:58] -rw-r--r--. 2 boinc boinc 442256150 Mar  6 21:23 EVNT.46701403._000146.pool.root.1
[2026-03-06 21:29:58] -rw-r--r--. 2 boinc boinc     15845 Mar  6 21:23 start_atlas.sh
[2026-03-06 21:29:58] drwxrwx--x. 2 boinc boinc      4096 Mar  6 21:23 shared
[2026-03-06 21:29:58] -rw-r--r--. 2 boinc boinc    597952 Mar  6 21:23 input.tar.gz
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc         0 Mar  6 21:23 boinc_lockfile
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc      2561 Mar  6 21:23 pandaJob.out
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc    999155 Mar  6 21:24 agis_schedconf.cvmfs.json
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc   1521291 Mar  6 21:24 agis_ddmendpoints.agis.ALL.json
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc       445 Mar  6 21:24 workernode_map.json
[2026-03-06 21:29:58] drwx------. 5 boinc boinc      4096 Mar  6 21:24 pilot3
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc       525 Mar  6 21:26 boinc_task_state.xml
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc       998 Mar  6 21:27 memory_monitor_summary.json
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc     22569 Mar  6 21:27 log.48955006._007269.job.log.tgz.1
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc      7048 Mar  6 21:29 heartbeat.json
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc        95 Mar  6 21:29 pilot_heartbeat.json
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc        23 Mar  6 21:29 wrapper_checkpoint.txt
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc      8192 Mar  6 21:29 boinc_mmap_file
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc      4819 Mar  6 21:29 pilotlog.txt
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc     92314 Mar  6 21:29 log.48955006._007269.job.log.1
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc       188 Mar  6 21:29 output.list
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc       620 Mar  6 21:29 runtime_log
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc    133120 Mar  6 21:29 result.tar.gz
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc      8635 Mar  6 21:29 runtime_log.err
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc       646 Mar  6 21:29 RKGNDm0HOI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmTvLLDmlsx4Sn.diag
[2026-03-06 21:29:58] -rw-r--r--. 1 boinc boinc     21868 Mar  6 21:29 stderr.txt
[2026-03-06 21:29:58] No HITS result produced
[2026-03-06 21:29:58]  *** Contents of shared directory: ***
[2026-03-06 21:29:58] total 432628
[2026-03-06 21:29:58] -rw-r--r--. 2 boinc boinc 442256150 Mar  6 21:23 ATLAS.root_0
[2026-03-06 21:29:58] -rw-r--r--. 2 boinc boinc     15845 Mar  6 21:23 start_atlas.sh
[2026-03-06 21:29:58] -rw-r--r--. 2 boinc boinc    597952 Mar  6 21:23 input.tar.gz
[2026-03-06 21:29:58] -rw-------. 1 boinc boinc    133120 Mar  6 21:29 result.tar.gz
21:29:59 (1328832): run_atlas exited; CPU time 36.428206
21:29:59 (1328832): called boinc_finish(0)

</stderr_txt>
]]>

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