Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:26 (375728): wrapper (7.7.26015): starting
00:00:26 (375728): wrapper: running run_atlas (--nthreads 9)
[2026-03-07 00:00:26] Arguments: --nthreads 9
[2026-03-07 00:00:26] Threads: 9
[2026-03-07 00:00:26] Checking for CVMFS
[2026-03-07 00:00:26] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 00:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 00:00:27] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 00:00:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 00:00:28] 2.13.3.0 424664 43740 404372 156988 3 557 25916509 32935937 41664 16776704 1 160348356 99.453 218800810 14406 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-07 00:00:28] CVMFS is ok
[2026-03-07 00:00:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 00:00:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 00:00:28] Further information can be found at the LHC@home message board.
[2026-03-07 00:00:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 00:00:28] Checking for apptainer binary...
[2026-03-07 00:00:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 00:00:28] Running /usr/bin/apptainer --version
[2026-03-07 00:00:28] apptainer version 1.4.5-2.el9
[2026-03-07 00:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 00:00:30] c6-12-29-3.aglt2.org
[2026-03-07 00:00:30] apptainer works
[2026-03-07 00:00:30] Set ATHENA_PROC_NUMBER=9
[2026-03-07 00:00:30] Set ATHENA_CORE_NUMBER=9
[2026-03-07 00:00:30] Starting ATLAS job with PandaID=7043676995
[2026-03-07 00:00:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 08:13:40]  *** The last 200 lines of the pilot log: ***
[2026-03-07 08:13:40] 2026-03-07 13:12:42,825 | INFO     | total number of processed events: 400 (read)
[2026-03-07 08:13:40] 2026-03-07 13:12:42,909 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7043676995/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 08:13:40] 2026-03-07 13:12:42,910 | INFO     | extracted standard info from prmon json
[2026-03-07 08:13:40] 2026-03-07 13:12:42,910 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 08:13:40] 2026-03-07 13:12:42,910 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 08:13:40] 2026-03-07 13:12:42,911 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 08:13:40] 2026-03-07 13:12:42,911 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 08:13:40] 2026-03-07 13:12:42,919 | INFO     | fitting pss+swap vs Time
[2026-03-07 08:13:40] 2026-03-07 13:12:42,920 | INFO     | sum of square deviations: 34508035648.09947
[2026-03-07 08:13:40] 2026-03-07 13:12:42,925 | INFO     | sum of deviations: 350113944981.0481
[2026-03-07 08:13:40] 2026-03-07 13:12:42,926 | INFO     | mean x: 1772874480.5176716
[2026-03-07 08:13:40] 2026-03-07 13:12:42,926 | INFO     | mean y: 2494719.9355509356
[2026-03-07 08:13:40] 2026-03-07 13:12:42,926 | INFO     | intersect: -17984854216.991077
[2026-03-07 08:13:40] 2026-03-07 13:12:42,927 | INFO     | chi2: 7.322878421183878
[2026-03-07 08:13:40] 2026-03-07 13:12:42,927 | INFO     | sum of square deviations: 33443084226.829807
[2026-03-07 08:13:40] 2026-03-07 13:12:42,933 | INFO     | sum of deviations: 408119885124.069
[2026-03-07 08:13:40] 2026-03-07 13:12:42,933 | INFO     | mean x: 1772874328.0189075
[2026-03-07 08:13:40] 2026-03-07 13:12:42,933 | INFO     | mean y: 2502970.3256302522
[2026-03-07 08:13:40] 2026-03-07 13:12:42,933 | INFO     | intersect: -21632620817.390736
[2026-03-07 08:13:40] 2026-03-07 13:12:42,934 | INFO     | chi2: 5.943337456073884
[2026-03-07 08:13:40] 2026-03-07 13:12:42,934 | INFO     | current chi2=5.943337456073884 (change=18.8387801321296 %)
[2026-03-07 08:13:40] 2026-03-07 13:12:42,934 | INFO     | right removable region: 475
[2026-03-07 08:13:40] 2026-03-07 13:12:42,935 | INFO     | sum of square deviations: 33442990896.745697
[2026-03-07 08:13:40] 2026-03-07 13:12:42,940 | INFO     | sum of deviations: 189225402711.3741
[2026-03-07 08:13:40] 2026-03-07 13:12:42,940 | INFO     | mean x: 1772874633.0231092
[2026-03-07 08:13:40] 2026-03-07 13:12:42,940 | INFO     | mean y: 2517745.693277311
[2026-03-07 08:13:40] 2026-03-07 13:12:42,940 | INFO     | intersect: -10028669878.234879
[2026-03-07 08:13:40] 2026-03-07 13:12:42,941 | INFO     | chi2: 3.2779920136116467
[2026-03-07 08:13:40] 2026-03-07 13:12:42,941 | INFO     | current chi2=3.2779920136116467 (change=55.23629063499188 %)
[2026-03-07 08:13:40] 2026-03-07 13:12:42,942 | INFO     | sum of square deviations: 32400114887.418423
[2026-03-07 08:13:40] 2026-03-07 13:12:42,947 | INFO     | sum of deviations: 98751170517.43091
[2026-03-07 08:13:40] 2026-03-07 13:12:42,947 | INFO     | mean x: 1772874785.5265393
[2026-03-07 08:13:40] 2026-03-07 13:12:42,947 | INFO     | mean y: 2530952.40552017
[2026-03-07 08:13:40] 2026-03-07 13:12:42,947 | INFO     | intersect: -5400951746.9588995
[2026-03-07 08:13:40] 2026-03-07 13:12:42,948 | INFO     | chi2: 1.969390754384448
[2026-03-07 08:13:40] 2026-03-07 13:12:42,948 | INFO     | current chi2=1.969390754384448 (change=39.9208190194887 %)
[2026-03-07 08:13:40] 2026-03-07 13:12:42,949 | INFO     | sum of square deviations: 31379203849.69124
[2026-03-07 08:13:40] 2026-03-07 13:12:42,954 | INFO     | sum of deviations: 48849568571.64375
[2026-03-07 08:13:40] 2026-03-07 13:12:42,954 | INFO     | mean x: 1772874938.025751
[2026-03-07 08:13:40] 2026-03-07 13:12:42,954 | INFO     | mean y: 2538402.4463519314
[2026-03-07 08:13:40] 2026-03-07 13:12:42,954 | INFO     | intersect: -2757384260.629428
[2026-03-07 08:13:40] 2026-03-07 13:12:42,955 | INFO     | chi2: 1.6208869675898863
[2026-03-07 08:13:40] 2026-03-07 13:12:42,955 | INFO     | current chi2=1.6208869675898863 (change=17.69602025492853 %)
[2026-03-07 08:13:40] 2026-03-07 13:12:42,955 | INFO     | left removable region: 30
[2026-03-07 08:13:40] 2026-03-07 13:12:42,970 | INFO     | sum of square deviations: 27325180718.63815
[2026-03-07 08:13:40] 2026-03-07 13:12:42,974 | INFO     | time since job start (29418s) is within the limit (349056.0s)
[2026-03-07 08:13:40] 2026-03-07 13:12:42,983 | INFO     | sum of deviations: 50614291324.91913
[2026-03-07 08:13:40] 2026-03-07 13:12:42,983 | INFO     | mean x: 1772875212.5370786
[2026-03-07 08:13:40] 2026-03-07 13:12:42,983 | INFO     | mean y: 2556423.368539326
[2026-03-07 08:13:40] 2026-03-07 13:12:42,983 | INFO     | intersect: -3281331189.8202004
[2026-03-07 08:13:40] 2026-03-07 13:12:43,018 | INFO     | chi2: 0.004555393094924407
[2026-03-07 08:13:40] 2026-03-07 13:12:43,019 | INFO     | current memory leak: 1.85 B/s (using 445 data points, chi2=0.00)
[2026-03-07 08:13:40] 2026-03-07 13:12:43,019 | INFO     | could have reported an average CPU frequency of 2622 MHz (20 samples)
[2026-03-07 08:13:40] 2026-03-07 13:12:43,027 | INFO     | ..............................
[2026-03-07 08:13:40] 2026-03-07 13:12:43,027 | INFO     | . Timing measurements:
[2026-03-07 08:13:40] 2026-03-07 13:12:43,027 | INFO     | . get job = 0 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,027 | INFO     | . initial setup = 38 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,027 | INFO     | . payload setup = 47 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,027 | INFO     | . stage-in = 0 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,027 | INFO     | . payload execution = 29341 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,028 | INFO     | . stage-out = 7 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,028 | INFO     | . log creation = 1 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,028 | INFO     | ..............................
[2026-03-07 08:13:40] 2026-03-07 13:12:43,368 | INFO     | 
[2026-03-07 08:13:40] 2026-03-07 13:12:43,368 | INFO     | job summary report
[2026-03-07 08:13:40] 2026-03-07 13:12:43,368 | INFO     | --------------------------------------------------
[2026-03-07 08:13:40] 2026-03-07 13:12:43,368 | INFO     | PanDA job id: 7043676995
[2026-03-07 08:13:40] 2026-03-07 13:12:43,368 | INFO     | task id: 48958593
[2026-03-07 08:13:40] 2026-03-07 13:12:43,368 | INFO     | errors: (none)
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | pilot state: finished 
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | transexitcode: 0
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | exeerrorcode: 0
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | exeerrordiag: 
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | exitcode: 0
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | exitmsg: OK
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | cpuconsumptiontime: 50201 s
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | nevents: 400
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | neventsw: 0
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | pid: 438751
[2026-03-07 08:13:40] 2026-03-07 13:12:43,369 | INFO     | pgrp: 438751
[2026-03-07 08:13:40] 2026-03-07 13:12:43,370 | INFO     | corecount: 9
[2026-03-07 08:13:40] 2026-03-07 13:12:43,370 | INFO     | event service: False
[2026-03-07 08:13:40] 2026-03-07 13:12:43,370 | INFO     | sizes: {0: 2294760, 1: 2295445, 2: 2295445, 3: 2295906, 14: 2295906, 29391: 2332920, 29392: 2333047, 29400: 2342101, 29403: 2342157, 29405: 2342351}
[2026-03-07 08:13:40] 2026-03-07 13:12:43,370 | INFO     | --------------------------------------------------
[2026-03-07 08:13:40] 2026-03-07 13:12:43,370 | INFO     | 
[2026-03-07 08:13:40] 2026-03-07 13:12:43,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-03-07 08:13:40] 2026-03-07 13:12:43,475 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,475 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | job 7043676995 has completed (purged errors)
[2026-03-07 08:13:40] 2026-03-07 13:12:43,477 | INFO     | overall cleanup function is called
[2026-03-07 08:13:40] 2026-03-07 13:12:44,526 | INFO     | --- collectZombieJob: --- 10, [438751]
[2026-03-07 08:13:40] 2026-03-07 13:12:44,529 | INFO     | zombie collector waiting for pid 438751
[2026-03-07 08:13:40] 2026-03-07 13:12:44,529 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 08:13:40] 2026-03-07 13:12:44,529 | INFO     | collected zombie processes
[2026-03-07 08:13:40] 2026-03-07 13:12:44,529 | INFO     | will attempt to kill all subprocesses of pid=438751
[2026-03-07 08:13:40] 2026-03-07 13:12:47,126 | INFO     | process IDs to be killed: [438751] (in reverse order)
[2026-03-07 08:13:40] 2026-03-07 13:12:47,604 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 08:13:40] 2026-03-07 13:12:47,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 08:13:40] 2026-03-07 13:12:47,678 | INFO     | did not find any defunct processes belonging to 438751
[2026-03-07 08:13:40] 2026-03-07 13:12:47,700 | INFO     | did not find any defunct processes belonging to 438751
[2026-03-07 08:13:40] 2026-03-07 13:12:47,701 | INFO     | ready for new job
[2026-03-07 08:13:40] 2026-03-07 13:12:47,701 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 08:13:40] 2026-03-07 13:12:47,703 | INFO     | **************************************
[2026-03-07 08:13:40] 2026-03-07 13:12:47,704 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 08:13:40] 2026-03-07 13:12:47,704 | INFO     | **************************************
[2026-03-07 08:13:40] 2026-03-07 13:12:47,704 | INFO     | 
[2026-03-07 08:13:40] 2026-03-07 13:12:47,709 | INFO     | architecture information:
[2026-03-07 08:13:40] 2026-03-07 13:12:47,709 | INFO     | executing command: cat /etc/os-release
[2026-03-07 08:13:40] 2026-03-07 13:12:47,765 | INFO     | cat /etc/os-release:
[2026-03-07 08:13:40] NAME="CentOS Linux"
[2026-03-07 08:13:40] VERSION="7 (Core)"
[2026-03-07 08:13:40] ID="centos"
[2026-03-07 08:13:40] ID_LIKE="rhel fedora"
[2026-03-07 08:13:40] VERSION_ID="7"
[2026-03-07 08:13:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 08:13:40] ANSI_COLOR="0;31"
[2026-03-07 08:13:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 08:13:40] HOME_URL="https://www.centos.org/"
[2026-03-07 08:13:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 08:13:40] 
[2026-03-07 08:13:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 08:13:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 08:13:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 08:13:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 08:13:40] 
[2026-03-07 08:13:40] 2026-03-07 13:12:47,765 | INFO     | **************************************
[2026-03-07 08:13:40] 2026-03-07 13:12:48,269 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-03-07 08:13:40] 2026-03-07 13:12:48,372 | INFO     | sufficient remaining disk space (92690972672 B)
[2026-03-07 08:13:40] 2026-03-07 13:12:48,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 08:13:40] 2026-03-07 13:12:48,373 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 08:13:40] 2026-03-07 13:12:48,373 | INFO     | update_server=False
[2026-03-07 08:13:40] 2026-03-07 13:12:48,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 08:13:40] 2026-03-07 13:12:48,373 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 08:13:40] 2026-03-07 13:12:48,409 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:13:40] 2026-03-07 13:12:48,612 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 08:13:40] 2026-03-07 13:12:48,612 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 08:13:40] 2026-03-07 13:12:48,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 08:13:40] 2026-03-07 13:12:48,612 | INFO     | will abort loop
[2026-03-07 08:13:40] 2026-03-07 13:12:49,360 | INFO     | all job control threads have been joined
[2026-03-07 08:13:40] 2026-03-07 13:12:49,378 | INFO     | [job] retrieve thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,415 | INFO     | [job] queue monitor thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,427 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,433 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,433 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 08:13:40] 2026-03-07 13:12:49,474 | INFO     | all data control threads have been joined
[2026-03-07 08:13:40] 2026-03-07 13:12:49,630 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,635 | INFO     | [job] job monitor thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,685 | INFO     | all payload control threads have been joined
[2026-03-07 08:13:40] 2026-03-07 13:12:49,973 | INFO     | [payload] validate_post thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:49,973 | INFO     | [payload] failed_post thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:50,379 | INFO     | [job] control thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:50,462 | INFO     | [job] validate thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:50,484 | INFO     | [data] control thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:50,504 | INFO     | [data] copytool_in thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:50,709 | INFO     | [payload] control thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:51,455 | INFO     | [data] copytool_out thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:12:52,384 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 08:13:40] 2026-03-07 13:13:18,339 | INFO     | PID=397393 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 08:13:40] 2026-03-07 13:13:18,339 | INFO     | .. there are 59 such processes running
[2026-03-07 08:13:40] 2026-03-07 13:13:18,345 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 08:13:40] 2026-03-07 13:13:18,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 08:13:40] 2026-03-07 13:13:18,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 08:13:40] 2026-03-07 13:13:19,781 | INFO     | [monitor] cgroup control has ended
[2026-03-07 08:13:40] 2026-03-07 13:13:20,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139906410309440)>', '<ExcThread(monitor, started 139905934026496)>']
[2026-03-07 08:13:40] 2026-03-07 13:13:21,360 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 08:13:40] 2026-03-07 13:13:21,360 | INFO     | [monitor] control thread has ended
[2026-03-07 08:13:40] 2026-03-07 13:13:25,845 | INFO     | all workflow threads have been joined
[2026-03-07 08:13:40] 2026-03-07 13:13:25,845 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 08:13:40] 2026-03-07 13:13:25,845 | INFO     | traces error code: 0
[2026-03-07 08:13:40] 2026-03-07 13:13:25,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 08:13:40] 2026-03-07 13:13:26,599 [wrapper] ==== pilot stdout END ====
[2026-03-07 08:13:40] 2026-03-07 13:13:26,654 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 08:13:40] 2026-03-07 13:13:26,683 [wrapper] pilotpid: 397393
[2026-03-07 08:13:40] 2026-03-07 13:13:26,706 [wrapper] Pilot exit status: 0
[2026-03-07 08:13:40] 2026-03-07 13:13:26,872 [wrapper] pandaids: 7043676995
[2026-03-07 08:13:40] 2026-03-07 13:13:27,324 [wrapper] cleanup supervisor_pilot 2099938 397394
[2026-03-07 08:13:40] 2026-03-07 13:13:27,328 [wrapper] Test setup, not cleaning
[2026-03-07 08:13:40] 2026-03-07 13:13:27,332 [wrapper] apfmon messages muted
[2026-03-07 08:13:40] 2026-03-07 13:13:27,335 [wrapper] ==== wrapper stdout END ====
[2026-03-07 08:13:40] 2026-03-07 13:13:27,338 [wrapper] ==== wrapper stderr END ====
[2026-03-07 08:13:40]  *** Error codes and diagnostics ***
[2026-03-07 08:13:40]     "exeErrorCode": 0,
[2026-03-07 08:13:40]     "exeErrorDiag": "",
[2026-03-07 08:13:40]     "pilotErrorCode": 0,
[2026-03-07 08:13:40]     "pilotErrorDiag": "",
[2026-03-07 08:13:40]  *** Listing of results directory ***
[2026-03-07 08:13:40] total 444124
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas      5111 Mar  6 15:52 queuedata.json
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas    584627 Mar  6 15:52 pilot3.tar.gz
[2026-03-07 08:13:40] -rwx------. 1 boincer umatlas     36322 Mar  6 15:52 runpilot2-wrapper.sh
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas       100 Mar  7 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 08:13:40] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  7 00:00 run_atlas
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas       105 Mar  7 00:00 job.xml
[2026-03-07 08:13:40] -rw-r--r--. 2 boincer umatlas 260512065 Mar  7 00:00 EVNT.48958591._000013.pool.root.1
[2026-03-07 08:13:40] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 00:00 start_atlas.sh
[2026-03-07 08:13:40] drwxrwx--x. 2 boincer umatlas      4096 Mar  7 00:00 shared
[2026-03-07 08:13:40] -rw-r--r--. 2 boincer umatlas    597974 Mar  7 00:00 input.tar.gz
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas         0 Mar  7 00:00 boinc_lockfile
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas      2617 Mar  7 00:00 pandaJob.out
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas        57 Mar  7 00:00 setup.sh.local
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas    999155 Mar  7 00:01 agis_schedconf.cvmfs.json
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas       444 Mar  7 00:02 workernode_map.json
[2026-03-07 08:13:40] drwx------. 5 boincer umatlas      4096 Mar  7 00:02 pilot3
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas 182597337 Mar  7 08:10 HITS.48958593._000340.pool.root.1
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas       531 Mar  7 08:10 boinc_task_state.xml
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas      1041 Mar  7 08:12 memory_monitor_summary.json
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas   1521291 Mar  7 08:12 agis_ddmendpoints.agis.ALL.json
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas    648874 Mar  7 08:12 log.48958593._000340.job.log.tgz.1
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas      6395 Mar  7 08:12 heartbeat.json
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas        95 Mar  7 08:13 pilot_heartbeat.json
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas      6879 Mar  7 08:13 init_data.xml
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas      5005 Mar  7 08:13 pilotlog.txt
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas   3217359 Mar  7 08:13 log.48958593._000340.job.log.1
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas       357 Mar  7 08:13 output.list
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas       620 Mar  7 08:13 runtime_log
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas   3880960 Mar  7 08:13 result.tar.gz
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas       660 Mar  7 08:13 yHFMDm0KrI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUdTLDm9oJHEm.diag
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas      9352 Mar  7 08:13 runtime_log.err
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas        28 Mar  7 08:13 wrapper_checkpoint.txt
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas      8192 Mar  7 08:13 boinc_mmap_file
[2026-03-07 08:13:40] -rw-r--r--. 1 boincer umatlas     21169 Mar  7 08:13 stderr.txt
[2026-03-07 08:13:40] HITS file was successfully produced:
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas 182597337 Mar  7 08:10 shared/HITS.pool.root.1
[2026-03-07 08:13:40]  *** Contents of shared directory: ***
[2026-03-07 08:13:40] total 437128
[2026-03-07 08:13:40] -rw-r--r--. 2 boincer umatlas 260512065 Mar  7 00:00 ATLAS.root_0
[2026-03-07 08:13:40] -rw-r--r--. 2 boincer umatlas     15845 Mar  7 00:00 start_atlas.sh
[2026-03-07 08:13:40] -rw-r--r--. 2 boincer umatlas    597974 Mar  7 00:00 input.tar.gz
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas 182597337 Mar  7 08:10 HITS.pool.root.1
[2026-03-07 08:13:40] -rw-------. 1 boincer umatlas   3880960 Mar  7 08:13 result.tar.gz
08:13:41 (375728): run_atlas exited; CPU time 51901.076724
08:13:41 (375728): called boinc_finish(0)

</stderr_txt>
]]>

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