Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:39 (3062226): wrapper (7.7.26015): starting
17:39:39 (3062226): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 17:39:39] Arguments: --nthreads 4
[2026-03-08 17:39:39] Threads: 4
[2026-03-08 17:39:39] Checking for CVMFS
[2026-03-08 17:39:39] No cvmfs_config command found, will try listing directly
[2026-03-08 17:39:39] CVMFS is ok
[2026-03-08 17:39:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 17:39:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 17:39:39] Further information can be found at the LHC@home message board.
[2026-03-08 17:39:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 17:39:39] Checking for apptainer binary...
[2026-03-08 17:39:39] which: no apptainer in ((null))
[2026-03-08 17:39:39] apptainer is not installed, using version from CVMFS
[2026-03-08 17:39:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 17:39:39] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot188/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-08 17:39:39] apptainer works
[2026-03-08 17:39:39] Set ATHENA_PROC_NUMBER=4
[2026-03-08 17:39:39] Set ATHENA_CORE_NUMBER=4
[2026-03-08 17:39:39] Starting ATLAS job with PandaID=7036629881
[2026-03-08 17:39:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot188/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 18:47:04]  *** The last 200 lines of the pilot log: ***
[2026-03-08 18:47:04]  guid=e9a86397-78cb-4f3a-bd7c-52b7b7ed02ec
[2026-03-08 18:47:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 18:47:04]  is_altstaged=None
[2026-03-08 18:47:04]  is_tar=False
[2026-03-08 18:47:04]  lfn=log.48700890._002759.job.log.tgz.1
[2026-03-08 18:47:04]  mtime=0
[2026-03-08 18:47:04]  protocol_id=None
[2026-03-08 18:47:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 18:47:04]  replicas=None
[2026-03-08 18:47:04]  scope=mc23_13p6TeV
[2026-03-08 18:47:04]  status=None
[2026-03-08 18:47:04]  status_code=0
[2026-03-08 18:47:04]  storage_token=
[2026-03-08 18:47:04]  surl=/var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7036629881/log.48700890._002759.job.log.tgz.1
[2026-03-08 18:47:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/4e/log.48700890._002759.job.log.tgz.1
[2026-03-08 18:47:04]  workdir=None
[2026-03-08 18:47:04] ]
[2026-03-08 18:47:04] 2026-03-08 17:46:07,842 | INFO     | transferring file log.48700890._002759.job.log.tgz.1 from /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7036629881/log.48700890._002759.job.log.tgz.1 to /var/lib/
[2026-03-08 18:47:04] 2026-03-08 17:46:07,843 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7036629881/log.48700890._002759.job.log.tgz.1 /var/lib/boinc/var/slot188/slots/0/
[2026-03-08 18:47:04] 2026-03-08 17:46:07,859 | INFO     | adding to output.list: log.48700890._002759.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/4e/log.48700890._002759.job.log.tg
[2026-03-08 18:47:04] 2026-03-08 17:46:07,859 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 18:47:04] 2026-03-08 17:46:07,859 | INFO     | summary of transferred files:
[2026-03-08 18:47:04] 2026-03-08 17:46:07,859 | INFO     |  -- lfn=log.48700890._002759.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 18:47:04] 2026-03-08 17:46:07,860 | INFO     | stage-out finished correctly
[2026-03-08 18:47:04] 2026-03-08 17:46:08,273 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 18:47:04] 2026-03-08 17:46:08,395 | INFO     | time since job start (3977s) is within the limit (349056.0s)
[2026-03-08 18:47:04] 2026-03-08 17:46:09,521 | WARNING  | process 3072856 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 18:47:04] 2026-03-08 17:46:09,521 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7036629881/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 18:47:04] 2026-03-08 17:46:09,975 | INFO     | number of running child processes to parent process 3072856: 1
[2026-03-08 18:47:04] 2026-03-08 17:46:09,975 | INFO     | maximum number of monitored processes: 6
[2026-03-08 18:47:04] 2026-03-08 17:46:10,037 | INFO     | job 7036629881 has state=finished
[2026-03-08 18:47:04] 2026-03-08 17:46:10,037 | INFO     | preparing for final server update for job 7036629881 in state='finished'
[2026-03-08 18:47:04] 2026-03-08 17:46:10,038 | INFO     | reading metadata from: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7036629881/jobReport.json
[2026-03-08 18:47:04] 2026-03-08 17:46:10,039 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot188/slots/0/workernode_map.json
[2026-03-08 18:47:04] 2026-03-08 17:46:10,039 | INFO     | this job has now completed (state=finished)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,039 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,039 | INFO     | log transfer has been attempted: DONE
[2026-03-08 18:47:04] 2026-03-08 17:46:10,040 | INFO     | job 7036629881 has finished - writing final server update
[2026-03-08 18:47:04] 2026-03-08 17:46:10,040 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19328/.job.ad'
[2026-03-08 18:47:04] 2026-03-08 17:46:10,040 | INFO     | total number of processed events: 400 (read)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,057 | INFO     | using path: /var/lib/boinc/var/slot188/slots/0/PanDA_Pilot-7036629881/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,058 | INFO     | extracted standard info from prmon json
[2026-03-08 18:47:04] 2026-03-08 17:46:10,058 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 18:47:04] 2026-03-08 17:46:10,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 18:47:04] 2026-03-08 17:46:10,058 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 18:47:04] 2026-03-08 17:46:10,058 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 18:47:04] 2026-03-08 17:46:10,059 | INFO     | fitting pss+swap vs Time
[2026-03-08 18:47:04] 2026-03-08 17:46:10,059 | INFO     | sum of square deviations: 60482994.5
[2026-03-08 18:47:04] 2026-03-08 17:46:10,059 | INFO     | sum of deviations: -137629908.0
[2026-03-08 18:47:04] 2026-03-08 17:46:10,059 | INFO     | mean x: 1772990056.5
[2026-03-08 18:47:04] 2026-03-08 17:46:10,059 | INFO     | mean y: 2319081.4482758623
[2026-03-08 18:47:04] 2026-03-08 17:46:10,059 | INFO     | intersect: 4036782989.4978323
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | chi2: 0.00032885381902783523
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | current memory leak: -2.28 B/s (using 58 data points, chi2=0.00)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | could have reported an average CPU frequency of 3587 MHz (6 samples)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | ..............................
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . Timing measurements:
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . get job = 0 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . initial setup = 5 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . payload setup = 5 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . stage-in = 0 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . payload execution = 3954 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . stage-out = 0 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | . log creation = 0 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,060 | INFO     | ..............................
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | 
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | job summary report
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | --------------------------------------------------
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | PanDA job id: 7036629881
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | task id: 48700890
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | errors: (none)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | pilot state: finished 
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | transexitcode: 0
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | exeerrorcode: 0
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | exeerrordiag: 
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | exitcode: 0
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | exitmsg: OK
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | cpuconsumptiontime: 15042 s
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | nevents: 400
[2026-03-08 18:47:04] 2026-03-08 17:46:10,285 | INFO     | neventsw: 0
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | pid: 3072856
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | pgrp: 3072856
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | corecount: 4
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | event service: False
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | sizes: {0: 2295704, 11: 2295704, 3963: 2321593, 3965: 2330671, 3967: 2330809}
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | --------------------------------------------------
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | 
[2026-03-08 18:47:04] 2026-03-08 17:46:10,286 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot188/slots/0
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,305 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | job 7036629881 has completed (purged errors)
[2026-03-08 18:47:04] 2026-03-08 17:46:10,306 | INFO     | overall cleanup function is called
[2026-03-08 18:47:04] 2026-03-08 17:46:11,313 | INFO     | --- collectZombieJob: --- 10, [3072856]
[2026-03-08 18:47:04] 2026-03-08 17:46:11,313 | INFO     | zombie collector waiting for pid 3072856
[2026-03-08 18:47:04] 2026-03-08 17:46:11,313 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 18:47:04] 2026-03-08 17:46:11,313 | INFO     | collected zombie processes
[2026-03-08 18:47:04] 2026-03-08 17:46:11,313 | INFO     | will attempt to kill all subprocesses of pid=3072856
[2026-03-08 18:47:04] 2026-03-08 17:46:11,762 | INFO     | process IDs to be killed: [3072856] (in reverse order)
[2026-03-08 18:47:04] 2026-03-08 17:46:11,995 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 18:47:04] 2026-03-08 17:46:11,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 18:47:04] 2026-03-08 17:46:12,024 | INFO     | did not find any defunct processes belonging to 3072856
[2026-03-08 18:47:04] 2026-03-08 17:46:12,052 | INFO     | did not find any defunct processes belonging to 3072856
[2026-03-08 18:47:04] 2026-03-08 17:46:12,052 | INFO     | ready for new job
[2026-03-08 18:47:04] 2026-03-08 17:46:12,052 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 18:47:04] 2026-03-08 17:46:12,053 | INFO     | **************************************
[2026-03-08 18:47:04] 2026-03-08 17:46:12,053 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 18:47:04] 2026-03-08 17:46:12,053 | INFO     | **************************************
[2026-03-08 18:47:04] 2026-03-08 17:46:12,053 | INFO     | 
[2026-03-08 18:47:04] 2026-03-08 17:46:12,059 | INFO     | architecture information:
[2026-03-08 18:47:04] 2026-03-08 17:46:12,059 | INFO     | executing command: cat /etc/os-release
[2026-03-08 18:47:04] 2026-03-08 17:46:12,074 | INFO     | cat /etc/os-release:
[2026-03-08 18:47:04] NAME="CentOS Linux"
[2026-03-08 18:47:04] VERSION="7 (Core)"
[2026-03-08 18:47:04] ID="centos"
[2026-03-08 18:47:04] ID_LIKE="rhel fedora"
[2026-03-08 18:47:04] VERSION_ID="7"
[2026-03-08 18:47:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 18:47:04] ANSI_COLOR="0;31"
[2026-03-08 18:47:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 18:47:04] HOME_URL="https://www.centos.org/"
[2026-03-08 18:47:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 18:47:04] 
[2026-03-08 18:47:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 18:47:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 18:47:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 18:47:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 18:47:04] 
[2026-03-08 18:47:04] 2026-03-08 17:46:12,075 | INFO     | **************************************
[2026-03-08 18:47:04] 2026-03-08 17:46:12,577 | INFO     | executing command: df -mP /var/lib/boinc/var/slot188/slots/0
[2026-03-08 18:47:04] 2026-03-08 17:46:12,593 | INFO     | sufficient remaining disk space (21226323968 B)
[2026-03-08 18:47:04] 2026-03-08 17:46:12,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 18:47:04] 2026-03-08 17:46:12,594 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 18:47:04] 2026-03-08 17:46:12,594 | INFO     | update_server=False
[2026-03-08 18:47:04] 2026-03-08 17:46:12,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 18:47:04] 2026-03-08 17:46:12,826 | INFO     | all data control threads have been joined
[2026-03-08 18:47:04] 2026-03-08 17:46:12,925 | INFO     | all payload control threads have been joined
[2026-03-08 18:47:04] 2026-03-08 17:46:13,418 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 18:47:04] 2026-03-08 17:46:13,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 18:47:04] 2026-03-08 17:46:13,483 | INFO     | aborting loop
[2026-03-08 18:47:04] 2026-03-08 17:46:13,599 | INFO     | [job] retrieve thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:13,831 | INFO     | [data] control thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:13,841 | INFO     | [payload] validate_post thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:13,930 | INFO     | [payload] control thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,239 | INFO     | all job control threads have been joined
[2026-03-08 18:47:04] 2026-03-08 17:46:14,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 18:47:04] 2026-03-08 17:46:14,416 | INFO     | [job] validate thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,437 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,488 | INFO     | [job] job monitor thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,540 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,692 | INFO     | [data] copytool_in thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,695 | INFO     | [payload] failed_post thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,791 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:14,897 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:15,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 18:47:04] 2026-03-08 17:46:15,244 | INFO     | [job] control thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:15,423 | INFO     | [data] copytool_out thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:16,125 | INFO     | [job] queue monitor thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:18,329 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 18:47:04] 2026-03-08 17:46:42,027 | INFO     | PID=3066762 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 18:47:04] 2026-03-08 17:46:42,027 | INFO     | .. there are 47 such processes running
[2026-03-08 18:47:04] 2026-03-08 17:46:42,028 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 18:47:04] 2026-03-08 17:46:42,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 18:47:04] 2026-03-08 17:46:42,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 18:47:04] 2026-03-08 17:46:58,112 | INFO     | [monitor] cgroup control has ended
[2026-03-08 18:47:04] 2026-03-08 17:46:59,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22701857318720)>', '<ExcThread(monitor, started 22701612992256)>']
[2026-03-08 18:47:04] 2026-03-08 17:47:00,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 18:47:04] 2026-03-08 17:47:00,115 | INFO     | [monitor] control thread has ended
[2026-03-08 18:47:04] 2026-03-08 17:47:04,150 | INFO     | all workflow threads have been joined
[2026-03-08 18:47:04] 2026-03-08 17:47:04,150 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 18:47:04] 2026-03-08 17:47:04,150 | INFO     | traces error code: 0
[2026-03-08 18:47:04] 2026-03-08 17:47:04,150 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 18:47:04] 2026-03-08 17:47:04,365 [wrapper] ==== pilot stdout END ====
[2026-03-08 18:47:04] 2026-03-08 17:47:04,367 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 18:47:04] 2026-03-08 17:47:04,368 [wrapper] pilotpid: 3066762
[2026-03-08 18:47:04] 2026-03-08 17:47:04,369 [wrapper] Pilot exit status: 0
[2026-03-08 18:47:04] 2026-03-08 17:47:04,375 [wrapper] pandaids: 7036629881
[2026-03-08 18:47:04] 2026-03-08 17:47:04,499 [wrapper] cleanup supervisor_pilot 3556172 3066763
[2026-03-08 18:47:04] 2026-03-08 17:47:04,502 [wrapper] Test setup, not cleaning
[2026-03-08 18:47:04] 2026-03-08 17:47:04,505 [wrapper] apfmon messages muted
[2026-03-08 18:47:04] 2026-03-08 17:47:04,506 [wrapper] ==== wrapper stdout END ====
[2026-03-08 18:47:04] 2026-03-08 17:47:04,507 [wrapper] ==== wrapper stderr END ====
[2026-03-08 18:47:04]  *** Error codes and diagnostics ***
[2026-03-08 18:47:04]     "exeErrorCode": 0,
[2026-03-08 18:47:04]     "exeErrorDiag": "",
[2026-03-08 18:47:04]     "pilotErrorCode": 0,
[2026-03-08 18:47:04]     "pilotErrorDiag": "",
[2026-03-08 18:47:04]  *** Listing of results directory ***
[2026-03-08 18:47:04] total 339256
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc    584627 Mar  3 21:50 pilot3.tar.gz
[2026-03-08 18:47:04] -rwx------. 1 boinc boinc     36322 Mar  3 22:19 runpilot2-wrapper.sh
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc      5111 Mar  3 22:21 queuedata.json
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc       100 Mar  8 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 18:47:04] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 17:39 run_atlas
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc       105 Mar  8 17:39 job.xml
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc      6707 Mar  8 17:39 init_data.xml
[2026-03-08 18:47:04] -rw-r--r--. 2 boinc boinc 191581416 Mar  8 17:39 EVNT.48700888._000122.pool.root.1
[2026-03-08 18:47:04] -rw-r--r--. 2 boinc boinc     15845 Mar  8 17:39 start_atlas.sh
[2026-03-08 18:47:04] drwxrwx--x. 2 boinc boinc      4096 Mar  8 17:39 shared
[2026-03-08 18:47:04] -rw-r--r--. 2 boinc boinc    597934 Mar  8 17:39 input.tar.gz
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc         0 Mar  8 17:39 boinc_lockfile
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc      2512 Mar  8 17:39 pandaJob.out
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc    999212 Mar  8 17:39 agis_schedconf.cvmfs.json
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc   1521291 Mar  8 17:39 agis_ddmendpoints.agis.ALL.json
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc       438 Mar  8 17:39 workernode_map.json
[2026-03-08 18:47:04] drwx------. 5 boinc boinc      4096 Mar  8 17:39 pilot3
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc 150198531 Mar  8 18:45 HITS.48700890._002759.pool.root.1
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc       529 Mar  8 18:45 boinc_task_state.xml
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc      1027 Mar  8 18:46 memory_monitor_summary.json
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc        95 Mar  8 18:46 pilot_heartbeat.json
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc    245988 Mar  8 18:46 log.48700890._002759.job.log.tgz.1
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc      6339 Mar  8 18:46 heartbeat.json
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc      8192 Mar  8 18:46 boinc_mmap_file
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc        27 Mar  8 18:46 wrapper_checkpoint.txt
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc      4830 Mar  8 18:47 pilotlog.txt
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc    593235 Mar  8 18:47 log.48700890._002759.job.log.1
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc       357 Mar  8 18:47 output.list
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc       620 Mar  8 18:47 runtime_log
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc    860160 Mar  8 18:47 result.tar.gz
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc      9221 Mar  8 18:47 runtime_log.err
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc       662 Mar  8 18:47 Ky2KDmTKmH9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmioHLDmiNM8Zn.diag
[2026-03-08 18:47:04] -rw-r--r--. 1 boinc boinc     21279 Mar  8 18:47 stderr.txt
[2026-03-08 18:47:04] HITS file was successfully produced:
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc 150198531 Mar  8 18:45 shared/HITS.pool.root.1
[2026-03-08 18:47:04]  *** Contents of shared directory: ***
[2026-03-08 18:47:04] total 335220
[2026-03-08 18:47:04] -rw-r--r--. 2 boinc boinc 191581416 Mar  8 17:39 ATLAS.root_0
[2026-03-08 18:47:04] -rw-r--r--. 2 boinc boinc     15845 Mar  8 17:39 start_atlas.sh
[2026-03-08 18:47:04] -rw-r--r--. 2 boinc boinc    597934 Mar  8 17:39 input.tar.gz
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc 150198531 Mar  8 18:45 HITS.pool.root.1
[2026-03-08 18:47:04] -rw-------. 1 boinc boinc    860160 Mar  8 18:47 result.tar.gz
18:47:06 (3062226): run_atlas exited; CPU time 15224.261446
18:47:06 (3062226): called boinc_finish(0)

</stderr_txt>
]]>

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