Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:15:36 (1809160): wrapper (7.7.26015): starting
10:15:36 (1809160): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 10:15:36] Arguments: --nthreads 4
[2026-03-07 10:15:36] Threads: 4
[2026-03-07 10:15:36] Checking for CVMFS
[2026-03-07 10:15:36] No cvmfs_config command found, will try listing directly
[2026-03-07 10:15:36] CVMFS is ok
[2026-03-07 10:15:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 10:15:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 10:15:36] Further information can be found at the LHC@home message board.
[2026-03-07 10:15:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 10:15:36] Checking for apptainer binary...
[2026-03-07 10:15:36] which: no apptainer in ((null))
[2026-03-07 10:15:36] apptainer is not installed, using version from CVMFS
[2026-03-07 10:15:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 10:15:37] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-07 10:15:37] apptainer works
[2026-03-07 10:15:37] Set ATHENA_PROC_NUMBER=4
[2026-03-07 10:15:37] Set ATHENA_CORE_NUMBER=4
[2026-03-07 10:15:37] Starting ATLAS job with PandaID=7044430335
[2026-03-07 10:15:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 11:32:03]  *** The last 200 lines of the pilot log: ***
[2026-03-07 11:32:03]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 11:32:03]  is_altstaged=None
[2026-03-07 11:32:03]  is_tar=False
[2026-03-07 11:32:03]  lfn=log.48958610._000193.job.log.tgz.1
[2026-03-07 11:32:03]  mtime=0
[2026-03-07 11:32:03]  protocol_id=None
[2026-03-07 11:32:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 11:32:03]  replicas=None
[2026-03-07 11:32:03]  scope=mc23_13p6TeV
[2026-03-07 11:32:03]  status=None
[2026-03-07 11:32:03]  status_code=0
[2026-03-07 11:32:03]  storage_token=
[2026-03-07 11:32:03]  surl=/var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7044430335/log.48958610._000193.job.log.tgz.1
[2026-03-07 11:32:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/31/log.48958610._000193.job.log.tgz.1
[2026-03-07 11:32:03]  workdir=None
[2026-03-07 11:32:03] ]
[2026-03-07 11:32:03] 2026-03-07 10:30:53,886 | INFO     | time since job start (4504s) is within the limit (349056.0s)
[2026-03-07 11:32:03] 2026-03-07 10:30:53,896 | INFO     | transferring file log.48958610._000193.job.log.tgz.1 from /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7044430335/log.48958610._000193.job.log.tgz.1 to /var/lib/b
[2026-03-07 11:32:03] 2026-03-07 10:30:53,897 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7044430335/log.48958610._000193.job.log.tgz.1 /var/lib/boinc/var/slot48/slots/5/lo
[2026-03-07 11:32:03] 2026-03-07 10:30:53,913 | INFO     | adding to output.list: log.48958610._000193.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/51/31/log.48958610._000193.job.log.tg
[2026-03-07 11:32:03] 2026-03-07 10:30:53,914 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 11:32:03] 2026-03-07 10:30:53,914 | INFO     | summary of transferred files:
[2026-03-07 11:32:03] 2026-03-07 10:30:53,914 | INFO     |  -- lfn=log.48958610._000193.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 11:32:03] 2026-03-07 10:30:53,914 | INFO     | stage-out finished correctly
[2026-03-07 11:32:03] 2026-03-07 10:30:54,929 | INFO     | monitor loop #329: job 0:7044430335 is in state 'finished'
[2026-03-07 11:32:03] 2026-03-07 10:30:54,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,163 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 11:32:03] 2026-03-07 10:30:55,210 | INFO     | job 7044430335 has state=finished
[2026-03-07 11:32:03] 2026-03-07 10:30:55,210 | INFO     | preparing for final server update for job 7044430335 in state='finished'
[2026-03-07 11:32:03] 2026-03-07 10:30:55,770 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,770 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7044430335/jobReport.json
[2026-03-07 11:32:03] 2026-03-07 10:30:55,772 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/5/workernode_map.json
[2026-03-07 11:32:03] 2026-03-07 10:30:55,772 | INFO     | this job has now completed (state=finished)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,772 | INFO     | log transfer has been attempted: DONE
[2026-03-07 11:32:03] 2026-03-07 10:30:55,772 | INFO     | job 7044430335 has finished - writing final server update
[2026-03-07 11:32:03] 2026-03-07 10:30:55,772 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2150511/.job.ad'
[2026-03-07 11:32:03] 2026-03-07 10:30:55,772 | INFO     | total number of processed events: 400 (read)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,790 | INFO     | using path: /var/lib/boinc/var/slot48/slots/5/PanDA_Pilot-7044430335/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,790 | INFO     | extracted standard info from prmon json
[2026-03-07 11:32:03] 2026-03-07 10:30:55,790 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 11:32:03] 2026-03-07 10:30:55,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 11:32:03] 2026-03-07 10:30:55,791 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 11:32:03] 2026-03-07 10:30:55,791 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | fitting pss+swap vs Time
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | sum of square deviations: 93240818.0
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | sum of deviations: -386493437.99999994
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | mean x: 1772877287.0
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | mean y: 2360747.2537313434
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | intersect: 7351131945.343635
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | chi2: 0.0014152024771888246
[2026-03-07 11:32:03] 2026-03-07 10:30:55,792 | INFO     | current memory leak: -4.15 B/s (using 67 data points, chi2=0.00)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | could have reported an average CPU frequency of 3598 MHz (6 samples)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | ..............................
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . Timing measurements:
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . get job = 0 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . initial setup = 4 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . payload setup = 4 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . stage-in = 0 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . payload execution = 4484 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . stage-out = 0 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | . log creation = 0 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,793 | INFO     | ..............................
[2026-03-07 11:32:03] 2026-03-07 10:30:55,891 | INFO     | time since job start (4506s) is within the limit (349056.0s)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | 
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | job summary report
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | --------------------------------------------------
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | PanDA job id: 7044430335
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | task id: 48958610
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | errors: (none)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | pilot state: finished 
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | transexitcode: 0
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | exeerrorcode: 0
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | exeerrordiag: 
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | exitcode: 0
[2026-03-07 11:32:03] 2026-03-07 10:30:55,967 | INFO     | exitmsg: OK
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | cpuconsumptiontime: 17148 s
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | nevents: 400
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | neventsw: 0
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | pid: 1820201
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | pgrp: 1820201
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | corecount: 4
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | event service: False
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | sizes: {0: 2295767, 11: 2295767, 4492: 2321918, 4494: 2330938, 4495: 2330994, 4496: 2331188}
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | --------------------------------------------------
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | 
[2026-03-07 11:32:03] 2026-03-07 10:30:55,968 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/5
[2026-03-07 11:32:03] 2026-03-07 10:30:55,988 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | job 7044430335 has completed (purged errors)
[2026-03-07 11:32:03] 2026-03-07 10:30:55,989 | INFO     | overall cleanup function is called
[2026-03-07 11:32:03] 2026-03-07 10:30:56,997 | INFO     | --- collectZombieJob: --- 10, [1820201]
[2026-03-07 11:32:03] 2026-03-07 10:30:56,997 | INFO     | zombie collector waiting for pid 1820201
[2026-03-07 11:32:03] 2026-03-07 10:30:56,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 11:32:03] 2026-03-07 10:30:56,997 | INFO     | collected zombie processes
[2026-03-07 11:32:03] 2026-03-07 10:30:56,997 | INFO     | will attempt to kill all subprocesses of pid=1820201
[2026-03-07 11:32:03] 2026-03-07 10:30:57,426 | INFO     | process IDs to be killed: [1820201] (in reverse order)
[2026-03-07 11:32:03] 2026-03-07 10:30:57,627 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 11:32:03] 2026-03-07 10:30:57,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 11:32:03] 2026-03-07 10:30:57,656 | INFO     | did not find any defunct processes belonging to 1820201
[2026-03-07 11:32:03] 2026-03-07 10:30:57,682 | INFO     | did not find any defunct processes belonging to 1820201
[2026-03-07 11:32:03] 2026-03-07 10:30:57,683 | INFO     | ready for new job
[2026-03-07 11:32:03] 2026-03-07 10:30:57,683 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 11:32:03] 2026-03-07 10:30:57,684 | INFO     | **************************************
[2026-03-07 11:32:03] 2026-03-07 10:30:57,684 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 11:32:03] 2026-03-07 10:30:57,684 | INFO     | **************************************
[2026-03-07 11:32:03] 2026-03-07 10:30:57,684 | INFO     | 
[2026-03-07 11:32:03] 2026-03-07 10:30:57,690 | INFO     | architecture information:
[2026-03-07 11:32:03] 2026-03-07 10:30:57,691 | INFO     | executing command: cat /etc/os-release
[2026-03-07 11:32:03] 2026-03-07 10:30:57,704 | INFO     | cat /etc/os-release:
[2026-03-07 11:32:03] NAME="CentOS Linux"
[2026-03-07 11:32:03] VERSION="7 (Core)"
[2026-03-07 11:32:03] ID="centos"
[2026-03-07 11:32:03] ID_LIKE="rhel fedora"
[2026-03-07 11:32:03] VERSION_ID="7"
[2026-03-07 11:32:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 11:32:03] ANSI_COLOR="0;31"
[2026-03-07 11:32:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 11:32:03] HOME_URL="https://www.centos.org/"
[2026-03-07 11:32:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 11:32:03] 
[2026-03-07 11:32:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 11:32:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 11:32:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 11:32:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 11:32:03] 
[2026-03-07 11:32:03] 2026-03-07 10:30:57,704 | INFO     | **************************************
[2026-03-07 11:32:03] 2026-03-07 10:30:58,206 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/5
[2026-03-07 11:32:03] 2026-03-07 10:30:58,221 | INFO     | sufficient remaining disk space (20378025984 B)
[2026-03-07 11:32:03] 2026-03-07 10:30:58,221 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 11:32:03] 2026-03-07 10:30:58,221 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 11:32:03] 2026-03-07 10:30:58,221 | INFO     | update_server=False
[2026-03-07 11:32:03] 2026-03-07 10:30:58,221 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 11:32:03] 2026-03-07 10:30:58,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:32:03] 2026-03-07 10:30:58,435 | INFO     | aborting loop
[2026-03-07 11:32:03] 2026-03-07 10:30:58,702 | INFO     | all job control threads have been joined
[2026-03-07 11:32:03] 2026-03-07 10:30:58,800 | INFO     | all data control threads have been joined
[2026-03-07 11:32:03] 2026-03-07 10:30:58,913 | INFO     | all payload control threads have been joined
[2026-03-07 11:32:03] 2026-03-07 10:30:59,226 | INFO     | [job] retrieve thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:30:59,440 | INFO     | [job] job monitor thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:30:59,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 11:32:03] 2026-03-07 10:30:59,593 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:30:59,707 | INFO     | [job] control thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:30:59,804 | INFO     | [data] control thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:30:59,918 | INFO     | [payload] control thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:00,050 | INFO     | [payload] validate_post thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:00,193 | INFO     | [job] validate thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:00,270 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:00,296 | INFO     | [payload] failed_post thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:00,329 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:00,536 | INFO     | [data] copytool_in thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:00,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 11:32:03] 2026-03-07 10:31:01,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 11:32:03] 2026-03-07 10:31:01,476 | INFO     | [data] copytool_out thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:01,853 | INFO     | [job] queue monitor thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:05,220 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:08,898 | INFO     | job.realtimelogging is not enabled
[2026-03-07 11:32:03] 2026-03-07 10:31:09,903 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 11:32:03] 2026-03-07 10:31:29,483 | INFO     | PID=1814267 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 11:32:03] 2026-03-07 10:31:29,483 | INFO     | .. there are 50 such processes running
[2026-03-07 11:32:03] 2026-03-07 10:31:29,484 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 11:32:03] 2026-03-07 10:31:29,484 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 11:32:03] 2026-03-07 10:31:29,484 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 11:32:03] 2026-03-07 10:31:55,887 | INFO     | [monitor] cgroup control has ended
[2026-03-07 11:32:03] 2026-03-07 10:31:57,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23240479070016)>', '<ExcThread(monitor, started 23240224519936)>']
[2026-03-07 11:32:03] 2026-03-07 10:31:58,620 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 11:32:03] 2026-03-07 10:31:58,620 | INFO     | [monitor] control thread has ended
[2026-03-07 11:32:03] 2026-03-07 10:32:02,681 | INFO     | all workflow threads have been joined
[2026-03-07 11:32:03] 2026-03-07 10:32:02,681 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 11:32:03] 2026-03-07 10:32:02,681 | INFO     | traces error code: 0
[2026-03-07 11:32:03] 2026-03-07 10:32:02,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 11:32:03] 2026-03-07 10:32:02,904 [wrapper] ==== pilot stdout END ====
[2026-03-07 11:32:03] 2026-03-07 10:32:02,906 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 11:32:03] 2026-03-07 10:32:02,909 [wrapper] pilotpid: 1814267
[2026-03-07 11:32:03] 2026-03-07 10:32:02,911 [wrapper] Pilot exit status: 0
[2026-03-07 11:32:03] 2026-03-07 10:32:02,919 [wrapper] pandaids: 7044430335
[2026-03-07 11:32:03] 2026-03-07 10:32:03,032 [wrapper] cleanup supervisor_pilot 2587824 1814268
[2026-03-07 11:32:03] 2026-03-07 10:32:03,035 [wrapper] Test setup, not cleaning
[2026-03-07 11:32:03] 2026-03-07 10:32:03,038 [wrapper] apfmon messages muted
[2026-03-07 11:32:03] 2026-03-07 10:32:03,040 [wrapper] ==== wrapper stdout END ====
[2026-03-07 11:32:03] 2026-03-07 10:32:03,042 [wrapper] ==== wrapper stderr END ====
[2026-03-07 11:32:03]  *** Error codes and diagnostics ***
[2026-03-07 11:32:03]     "exeErrorCode": 0,
[2026-03-07 11:32:03]     "exeErrorDiag": "",
[2026-03-07 11:32:03]     "pilotErrorCode": 0,
[2026-03-07 11:32:03]     "pilotErrorDiag": "",
[2026-03-07 11:32:03]  *** Listing of results directory ***
[2026-03-07 11:32:03] total 430944
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc    584627 Mar  7 05:09 pilot3.tar.gz
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc      5111 Mar  7 05:09 queuedata.json
[2026-03-07 11:32:03] -rwx------. 1 boinc boinc     36322 Mar  7 05:09 runpilot2-wrapper.sh
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc       100 Mar  7 10:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 11:32:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 10:15 run_atlas
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc       105 Mar  7 10:15 job.xml
[2026-03-07 11:32:03] -rw-r--r--. 2 boinc boinc     15845 Mar  7 10:15 start_atlas.sh
[2026-03-07 11:32:03] drwxrwx--x. 2 boinc boinc      4096 Mar  7 10:15 shared
[2026-03-07 11:32:03] -rw-r--r--. 2 boinc boinc    597928 Mar  7 10:15 input.tar.gz
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc      6703 Mar  7 10:15 init_data.xml
[2026-03-07 11:32:03] -rw-r--r--. 2 boinc boinc 259167474 Mar  7 10:15 EVNT.48958608._000006.pool.root.1
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc         0 Mar  7 10:15 boinc_lockfile
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc      2524 Mar  7 10:15 pandaJob.out
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc    999153 Mar  7 10:15 agis_schedconf.cvmfs.json
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc   1521291 Mar  7 10:15 agis_ddmendpoints.agis.ALL.json
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc       444 Mar  7 10:15 workernode_map.json
[2026-03-07 11:32:03] drwx------. 5 boinc boinc      4096 Mar  7 10:15 pilot3
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc 176310292 Mar  7 11:30 HITS.48958610._000193.pool.root.1
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc       529 Mar  7 11:30 boinc_task_state.xml
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc      1033 Mar  7 11:30 memory_monitor_summary.json
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc    269044 Mar  7 11:30 log.48958610._000193.job.log.tgz.1
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc      6347 Mar  7 11:30 heartbeat.json
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc        95 Mar  7 11:31 pilot_heartbeat.json
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc      8192 Mar  7 11:31 boinc_mmap_file
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc        27 Mar  7 11:31 wrapper_checkpoint.txt
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc      4901 Mar  7 11:32 pilotlog.txt
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc    666036 Mar  7 11:32 log.48958610._000193.job.log.1
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc       357 Mar  7 11:32 output.list
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc       620 Mar  7 11:32 runtime_log
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc    952320 Mar  7 11:32 result.tar.gz
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc      9204 Mar  7 11:32 runtime_log.err
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc       662 Mar  7 11:32 HimLDmm9xI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmsLSLDmTlkILo.diag
[2026-03-07 11:32:03] -rw-r--r--. 1 boinc boinc     21288 Mar  7 11:32 stderr.txt
[2026-03-07 11:32:03] HITS file was successfully produced:
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc 176310292 Mar  7 11:30 shared/HITS.pool.root.1
[2026-03-07 11:32:03]  *** Contents of shared directory: ***
[2026-03-07 11:32:03] total 426816
[2026-03-07 11:32:03] -rw-r--r--. 2 boinc boinc     15845 Mar  7 10:15 start_atlas.sh
[2026-03-07 11:32:03] -rw-r--r--. 2 boinc boinc    597928 Mar  7 10:15 input.tar.gz
[2026-03-07 11:32:03] -rw-r--r--. 2 boinc boinc 259167474 Mar  7 10:15 ATLAS.root_0
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc 176310292 Mar  7 11:30 HITS.pool.root.1
[2026-03-07 11:32:03] -rw-------. 1 boinc boinc    952320 Mar  7 11:32 result.tar.gz
11:32:04 (1809160): run_atlas exited; CPU time 17346.422793
11:32:04 (1809160): called boinc_finish(0)

</stderr_txt>
]]>

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