Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:46:10 (3962811): wrapper (7.7.26015): starting
00:46:10 (3962811): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 00:46:10] Arguments: --nthreads 4
[2026-03-09 00:46:10] Threads: 4
[2026-03-09 00:46:10] Checking for CVMFS
[2026-03-09 00:46:10] No cvmfs_config command found, will try listing directly
[2026-03-09 00:46:10] CVMFS is ok
[2026-03-09 00:46:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 00:46:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 00:46:11] Further information can be found at the LHC@home message board.
[2026-03-09 00:46:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 00:46:11] Checking for apptainer binary...
[2026-03-09 00:46:11] which: no apptainer in ((null))
[2026-03-09 00:46:11] apptainer is not installed, using version from CVMFS
[2026-03-09 00:46:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 00:46:12] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-09 00:46:12] apptainer works
[2026-03-09 00:46:12] Set ATHENA_PROC_NUMBER=4
[2026-03-09 00:46:12] Set ATHENA_CORE_NUMBER=4
[2026-03-09 00:46:12] Starting ATLAS job with PandaID=7043867964
[2026-03-09 00:46:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 04:52:51]  *** The last 200 lines of the pilot log: ***
[2026-03-09 04:52:51] 2026-03-09 03:52:08,015 | INFO     | preparing for final server update for job 7043867964 in state='finished'
[2026-03-09 04:52:51] 2026-03-09 03:52:08,085 | INFO     | time since job start (14687s) is within the limit (349056.0s)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,723 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,723 | INFO     | reading metadata from: /var/lib/boinc/var/slot20/slots/1/PanDA_Pilot-7043867964/jobReport.json
[2026-03-09 04:52:51] 2026-03-09 03:52:08,727 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot20/slots/1/workernode_map.json
[2026-03-09 04:52:51] 2026-03-09 03:52:08,727 | INFO     | this job has now completed (state=finished)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,727 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,727 | INFO     | log transfer has been attempted: DONE
[2026-03-09 04:52:51] 2026-03-09 03:52:08,728 | INFO     | job 7043867964 has finished - writing final server update
[2026-03-09 04:52:51] 2026-03-09 03:52:08,728 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2037581/.job.ad'
[2026-03-09 04:52:51] 2026-03-09 03:52:08,728 | INFO     | total number of processed events: 400 (read)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,740 | INFO     | using path: /var/lib/boinc/var/slot20/slots/1/PanDA_Pilot-7043867964/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,741 | INFO     | extracted standard info from prmon json
[2026-03-09 04:52:51] 2026-03-09 03:52:08,741 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 04:52:51] 2026-03-09 03:52:08,741 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 04:52:51] 2026-03-09 03:52:08,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 04:52:51] 2026-03-09 03:52:08,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 04:52:51] 2026-03-09 03:52:08,746 | INFO     | fitting pss+swap vs Time
[2026-03-09 04:52:51] 2026-03-09 03:52:08,746 | INFO     | sum of square deviations: 4286517580.0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,748 | INFO     | sum of deviations: -22974670096.000004
[2026-03-09 04:52:51] 2026-03-09 03:52:08,748 | INFO     | mean x: 1773020986.5
[2026-03-09 04:52:51] 2026-03-09 03:52:08,748 | INFO     | mean y: 2349400.158333333
[2026-03-09 04:52:51] 2026-03-09 03:52:08,748 | INFO     | intersect: 9505301733.348572
[2026-03-09 04:52:51] 2026-03-09 03:52:08,749 | INFO     | chi2: 1.6746166503872602
[2026-03-09 04:52:51] 2026-03-09 03:52:08,749 | INFO     | sum of square deviations: 4024149870.0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,751 | INFO     | sum of deviations: -22544814991.0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,751 | INFO     | mean x: 1773020834.0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,751 | INFO     | mean y: 2349650.0468085106
[2026-03-09 04:52:51] 2026-03-09 03:52:08,751 | INFO     | intersect: 9935485335.60181
[2026-03-09 04:52:51] 2026-03-09 03:52:08,751 | INFO     | chi2: 1.6724075485528378
[2026-03-09 04:52:51] 2026-03-09 03:52:08,751 | INFO     | current chi2=1.6724075485528378 (change=0.13191686789400392 %)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,752 | INFO     | right removable region: 234
[2026-03-09 04:52:51] 2026-03-09 03:52:08,752 | INFO     | sum of square deviations: 4024149870.0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,753 | INFO     | sum of deviations: -49180959701.00001
[2026-03-09 04:52:51] 2026-03-09 03:52:08,754 | INFO     | mean x: 1773021139.0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,754 | INFO     | mean y: 2364417.5319148935
[2026-03-09 04:52:51] 2026-03-09 03:52:08,754 | INFO     | intersect: 21671259464.470146
[2026-03-09 04:52:51] 2026-03-09 03:52:08,754 | INFO     | chi2: 0.37645893350989995
[2026-03-09 04:52:51] 2026-03-09 03:52:08,754 | INFO     | current chi2=0.37645893350989995 (change=77.51969482550871 %)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,755 | INFO     | sum of square deviations: 3772712597.5
[2026-03-09 04:52:51] 2026-03-09 03:52:08,756 | INFO     | sum of deviations: -39964268889.0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,756 | INFO     | mean x: 1773021291.5
[2026-03-09 04:52:51] 2026-03-09 03:52:08,756 | INFO     | mean y: 2358810.9565217393
[2026-03-09 04:52:51] 2026-03-09 03:52:08,756 | INFO     | intersect: 18783937796.42761
[2026-03-09 04:52:51] 2026-03-09 03:52:08,757 | INFO     | chi2: 0.3482596036973072
[2026-03-09 04:52:51] 2026-03-09 03:52:08,757 | INFO     | current chi2=0.3482596036973072 (change=7.490678876890351 %)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,757 | INFO     | left removable region: 20
[2026-03-09 04:52:51] 2026-03-09 03:52:08,757 | INFO     | sum of square deviations: 3038856977.5
[2026-03-09 04:52:51] 2026-03-09 03:52:08,759 | INFO     | sum of deviations: -15517775573.5
[2026-03-09 04:52:51] 2026-03-09 03:52:08,759 | INFO     | mean x: 1773021413.5
[2026-03-09 04:52:51] 2026-03-09 03:52:08,759 | INFO     | mean y: 2343255.528037383
[2026-03-09 04:52:51] 2026-03-09 03:52:08,759 | INFO     | intersect: 9056190996.7723
[2026-03-09 04:52:51] 2026-03-09 03:52:08,759 | INFO     | chi2: 0.20011515029257962
[2026-03-09 04:52:51] 2026-03-09 03:52:08,759 | INFO     | current memory leak: -5.11 B/s (using 214 data points, chi2=0.20)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,760 | INFO     | could have reported an average CPU frequency of 2508 MHz (12 samples)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,760 | INFO     | ..............................
[2026-03-09 04:52:51] 2026-03-09 03:52:08,760 | INFO     | . Timing measurements:
[2026-03-09 04:52:51] 2026-03-09 03:52:08,760 | INFO     | . get job = 0 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,760 | INFO     | . initial setup = 22 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,760 | INFO     | . payload setup = 24 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,760 | INFO     | . stage-in = 0 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,761 | INFO     | . payload execution = 14653 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,761 | INFO     | . stage-out = 1 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,761 | INFO     | . log creation = 0 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,761 | INFO     | ..............................
[2026-03-09 04:52:51] 2026-03-09 03:52:08,853 | INFO     | 
[2026-03-09 04:52:51] 2026-03-09 03:52:08,853 | INFO     | job summary report
[2026-03-09 04:52:51] 2026-03-09 03:52:08,853 | INFO     | --------------------------------------------------
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | PanDA job id: 7043867964
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | task id: 48967030
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | errors: (none)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | pilot state: finished 
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | transexitcode: 0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | exeerrorcode: 0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | exeerrordiag: 
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | exitcode: 0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | exitmsg: OK
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | cpuconsumptiontime: 51987 s
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | nevents: 400
[2026-03-09 04:52:51] 2026-03-09 03:52:08,854 | INFO     | neventsw: 0
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | pid: 3972373
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | pgrp: 3972373
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | corecount: 4
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | event service: False
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | sizes: {0: 2279820, 1: 2280281, 14681: 2311534, 14682: 2311533, 14684: 2320665, 14687: 2320803}
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | --------------------------------------------------
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | 
[2026-03-09 04:52:51] 2026-03-09 03:52:08,855 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/1
[2026-03-09 04:52:51] 2026-03-09 03:52:08,880 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,880 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,880 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,880 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,882 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,882 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,882 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,882 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 04:52:51] 2026-03-09 03:52:08,882 | INFO     | job 7043867964 has completed (purged errors)
[2026-03-09 04:52:51] 2026-03-09 03:52:08,882 | INFO     | overall cleanup function is called
[2026-03-09 04:52:51] 2026-03-09 03:52:09,891 | INFO     | --- collectZombieJob: --- 10, [3972373]
[2026-03-09 04:52:51] 2026-03-09 03:52:09,892 | INFO     | zombie collector waiting for pid 3972373
[2026-03-09 04:52:51] 2026-03-09 03:52:09,892 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 04:52:51] 2026-03-09 03:52:09,892 | INFO     | collected zombie processes
[2026-03-09 04:52:51] 2026-03-09 03:52:09,892 | INFO     | will attempt to kill all subprocesses of pid=3972373
[2026-03-09 04:52:51] 2026-03-09 03:52:10,305 | INFO     | process IDs to be killed: [3972373] (in reverse order)
[2026-03-09 04:52:51] 2026-03-09 03:52:10,447 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 04:52:51] 2026-03-09 03:52:10,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 04:52:51] 2026-03-09 03:52:10,461 | INFO     | did not find any defunct processes belonging to 3972373
[2026-03-09 04:52:51] 2026-03-09 03:52:10,473 | INFO     | did not find any defunct processes belonging to 3972373
[2026-03-09 04:52:51] 2026-03-09 03:52:10,474 | INFO     | ready for new job
[2026-03-09 04:52:51] 2026-03-09 03:52:10,474 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 04:52:51] 2026-03-09 03:52:10,476 | INFO     | **************************************
[2026-03-09 04:52:51] 2026-03-09 03:52:10,476 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 04:52:51] 2026-03-09 03:52:10,476 | INFO     | **************************************
[2026-03-09 04:52:51] 2026-03-09 03:52:10,477 | INFO     | 
[2026-03-09 04:52:51] 2026-03-09 03:52:10,481 | INFO     | architecture information:
[2026-03-09 04:52:51] 2026-03-09 03:52:10,481 | INFO     | executing command: cat /etc/os-release
[2026-03-09 04:52:51] 2026-03-09 03:52:10,500 | INFO     | cat /etc/os-release:
[2026-03-09 04:52:51] NAME="CentOS Linux"
[2026-03-09 04:52:51] VERSION="7 (Core)"
[2026-03-09 04:52:51] ID="centos"
[2026-03-09 04:52:51] ID_LIKE="rhel fedora"
[2026-03-09 04:52:51] VERSION_ID="7"
[2026-03-09 04:52:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 04:52:51] ANSI_COLOR="0;31"
[2026-03-09 04:52:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 04:52:51] HOME_URL="https://www.centos.org/"
[2026-03-09 04:52:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 04:52:51] 
[2026-03-09 04:52:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 04:52:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 04:52:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 04:52:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 04:52:51] 
[2026-03-09 04:52:51] 2026-03-09 03:52:10,500 | INFO     | **************************************
[2026-03-09 04:52:51] 2026-03-09 03:52:11,003 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/1
[2026-03-09 04:52:51] 2026-03-09 03:52:11,020 | INFO     | sufficient remaining disk space (20582498304 B)
[2026-03-09 04:52:51] 2026-03-09 03:52:11,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 04:52:51] 2026-03-09 03:52:11,021 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 04:52:51] 2026-03-09 03:52:11,021 | INFO     | update_server=False
[2026-03-09 04:52:51] 2026-03-09 03:52:11,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 04:52:51] 2026-03-09 03:52:11,215 | INFO     | all data control threads have been joined
[2026-03-09 04:52:51] 2026-03-09 03:52:11,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 04:52:51] 2026-03-09 03:52:11,464 | INFO     | aborting loop
[2026-03-09 04:52:51] 2026-03-09 03:52:11,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 04:52:51] 2026-03-09 03:52:12,026 | INFO     | [job] retrieve thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,076 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,164 | INFO     | [payload] failed_post thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,220 | INFO     | [data] control thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,224 | INFO     | all job control threads have been joined
[2026-03-09 04:52:51] 2026-03-09 03:52:12,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,316 | INFO     | [job] validate thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,390 | INFO     | all payload control threads have been joined
[2026-03-09 04:52:51] 2026-03-09 03:52:12,469 | INFO     | [job] job monitor thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 04:52:51] 2026-03-09 03:52:12,815 | INFO     | [payload] validate_post thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:12,964 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:13,186 | INFO     | [data] copytool_in thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:13,225 | INFO     | [job] control thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:13,395 | INFO     | [payload] control thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:13,477 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:13,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 04:52:51] 2026-03-09 03:52:13,936 | INFO     | [data] copytool_out thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:14,870 | INFO     | [job] queue monitor thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:16,533 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 04:52:51] 2026-03-09 03:52:41,652 | INFO     | PID=3967062 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 04:52:51] 2026-03-09 03:52:41,652 | INFO     | .. there are 12 such processes running
[2026-03-09 04:52:51] 2026-03-09 03:52:41,652 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 04:52:51] 2026-03-09 03:52:41,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 04:52:51] 2026-03-09 03:52:41,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 04:52:51] 2026-03-09 03:52:45,097 | INFO     | [monitor] cgroup control has ended
[2026-03-09 04:52:51] 2026-03-09 03:52:46,199 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22543753807680)>', '<ExcThread(monitor, started 22543512905472)>']
[2026-03-09 04:52:51] 2026-03-09 03:52:46,673 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 04:52:51] 2026-03-09 03:52:46,673 | INFO     | [monitor] control thread has ended
[2026-03-09 04:52:51] 2026-03-09 03:52:51,224 | INFO     | all workflow threads have been joined
[2026-03-09 04:52:51] 2026-03-09 03:52:51,224 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 04:52:51] 2026-03-09 03:52:51,224 | INFO     | traces error code: 0
[2026-03-09 04:52:51] 2026-03-09 03:52:51,225 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 04:52:51] 2026-03-09 03:52:51,416 [wrapper] ==== pilot stdout END ====
[2026-03-09 04:52:51] 2026-03-09 03:52:51,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 04:52:51] 2026-03-09 03:52:51,422 [wrapper] pilotpid: 3967062
[2026-03-09 04:52:51] 2026-03-09 03:52:51,427 [wrapper] Pilot exit status: 0
[2026-03-09 04:52:51] 2026-03-09 03:52:51,438 [wrapper] pandaids: 7043867964
[2026-03-09 04:52:51] 2026-03-09 03:52:51,519 [wrapper] cleanup supervisor_pilot   38207 3967063
[2026-03-09 04:52:51] 2026-03-09 03:52:51,522 [wrapper] Test setup, not cleaning
[2026-03-09 04:52:51] 2026-03-09 03:52:51,529 [wrapper] apfmon messages muted
[2026-03-09 04:52:51] 2026-03-09 03:52:51,532 [wrapper] ==== wrapper stdout END ====
[2026-03-09 04:52:51] 2026-03-09 03:52:51,534 [wrapper] ==== wrapper stderr END ====
[2026-03-09 04:52:51]  *** Error codes and diagnostics ***
[2026-03-09 04:52:51]     "exeErrorCode": 0,
[2026-03-09 04:52:51]     "exeErrorDiag": "",
[2026-03-09 04:52:51]     "pilotErrorCode": 0,
[2026-03-09 04:52:51]     "pilotErrorDiag": "",
[2026-03-09 04:52:51]  *** Listing of results directory ***
[2026-03-09 04:52:51] total 414044
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc      5111 Mar  7 00:36 queuedata.json
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc    584627 Mar  7 00:36 pilot3.tar.gz
[2026-03-09 04:52:51] -rwx------. 1 boinc boinc     36322 Mar  7 00:36 runpilot2-wrapper.sh
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc       100 Mar  9 00:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 04:52:51] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 00:46 run_atlas
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc       105 Mar  9 00:46 job.xml
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc      6562 Mar  9 00:46 init_data.xml
[2026-03-09 04:52:51] -rw-r--r--. 2 boinc boinc 214334732 Mar  9 00:46 EVNT.48967027._000020.pool.root.1
[2026-03-09 04:52:51] -rw-r--r--. 2 boinc boinc     15845 Mar  9 00:46 start_atlas.sh
[2026-03-09 04:52:51] drwxrwx--x. 2 boinc boinc      4096 Mar  9 00:46 shared
[2026-03-09 04:52:51] -rw-r--r--. 2 boinc boinc    597941 Mar  9 00:46 input.tar.gz
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc         0 Mar  9 00:46 boinc_lockfile
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc      2566 Mar  9 00:46 pandaJob.out
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc    999108 Mar  9 00:46 agis_schedconf.cvmfs.json
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc       452 Mar  9 00:47 workernode_map.json
[2026-03-09 04:52:51] drwx------. 5 boinc boinc      4096 Mar  9 00:47 pilot3
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc 200777802 Mar  9 04:51 HITS.48967030._002006.pool.root.1
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc       531 Mar  9 04:51 boinc_task_state.xml
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc      1034 Mar  9 04:52 memory_monitor_summary.json
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc   1511578 Mar  9 04:52 agis_ddmendpoints.agis.ALL.json
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc    414380 Mar  9 04:52 log.48967030._002006.job.log.tgz.1
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc        95 Mar  9 04:52 pilot_heartbeat.json
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc      6403 Mar  9 04:52 heartbeat.json
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc      8192 Mar  9 04:52 boinc_mmap_file
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc        28 Mar  9 04:52 wrapper_checkpoint.txt
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc      4829 Mar  9 04:52 pilotlog.txt
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc   2051680 Mar  9 04:52 log.48967030._002006.job.log.1
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc       357 Mar  9 04:52 output.list
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc       620 Mar  9 04:52 runtime_log
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc   2488320 Mar  9 04:52 result.tar.gz
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc      9205 Mar  9 04:52 runtime_log.err
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc       665 Mar  9 04:52 UhXMDmuttI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmExTLDmqqE5Em.diag
[2026-03-09 04:52:51] -rw-r--r--. 1 boinc boinc     21144 Mar  9 04:52 stderr.txt
[2026-03-09 04:52:51] HITS file was successfully produced:
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc 200777802 Mar  9 04:51 shared/HITS.pool.root.1
[2026-03-09 04:52:51]  *** Contents of shared directory: ***
[2026-03-09 04:52:51] total 408428
[2026-03-09 04:52:51] -rw-r--r--. 2 boinc boinc 214334732 Mar  9 00:46 ATLAS.root_0
[2026-03-09 04:52:51] -rw-r--r--. 2 boinc boinc     15845 Mar  9 00:46 start_atlas.sh
[2026-03-09 04:52:51] -rw-r--r--. 2 boinc boinc    597941 Mar  9 00:46 input.tar.gz
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc 200777802 Mar  9 04:51 HITS.pool.root.1
[2026-03-09 04:52:51] -rw-------. 1 boinc boinc   2488320 Mar  9 04:52 result.tar.gz
04:52:52 (3962811): run_atlas exited; CPU time 52665.711822
04:52:52 (3962811): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN