Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:43 (3983351): wrapper (7.7.26015): starting
22:52:43 (3983351): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 22:52:43] Arguments: --nthreads 4
[2026-03-08 22:52:43] Threads: 4
[2026-03-08 22:52:43] Checking for CVMFS
[2026-03-08 22:52:43] No cvmfs_config command found, will try listing directly
[2026-03-08 22:52:43] CVMFS is ok
[2026-03-08 22:52:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 22:52:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 22:52:43] Further information can be found at the LHC@home message board.
[2026-03-08 22:52:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 22:52:43] Checking for apptainer binary...
[2026-03-08 22:52:43] which: no apptainer in ((null))
[2026-03-08 22:52:43] apptainer is not installed, using version from CVMFS
[2026-03-08 22:52:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 22:52:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-03-08 22:52:43] apptainer works
[2026-03-08 22:52:43] Set ATHENA_PROC_NUMBER=4
[2026-03-08 22:52:43] Set ATHENA_CORE_NUMBER=4
[2026-03-08 22:52:43] Starting ATLAS job with PandaID=7043832762
[2026-03-08 22:52:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 02:47:28]  *** The last 200 lines of the pilot log: ***
[2026-03-09 02:47:28] 2026-03-09 01:46:30,448 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_38291/.job.ad'
[2026-03-09 02:47:28] 2026-03-09 01:46:30,449 | INFO     | total number of processed events: 400 (read)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,460 | INFO     | using path: /var/lib/boinc/var/slot32/slots/0/PanDA_Pilot-7043832762/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,461 | INFO     | extracted standard info from prmon json
[2026-03-09 02:47:28] 2026-03-09 01:46:30,461 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 02:47:28] 2026-03-09 01:46:30,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 02:47:28] 2026-03-09 01:46:30,461 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 02:47:28] 2026-03-09 01:46:30,461 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 02:47:28] 2026-03-09 01:46:30,465 | INFO     | fitting pss+swap vs Time
[2026-03-09 02:47:28] 2026-03-09 01:46:30,465 | INFO     | sum of square deviations: 3772712597.5
[2026-03-09 02:47:28] 2026-03-09 01:46:30,467 | INFO     | sum of deviations: 12813044601.500004
[2026-03-09 02:47:28] 2026-03-09 01:46:30,467 | INFO     | mean x: 1773013784.5
[2026-03-09 02:47:28] 2026-03-09 01:46:30,467 | INFO     | mean y: 2310481.1782608693
[2026-03-09 02:47:28] 2026-03-09 01:46:30,467 | INFO     | intersect: -6019273223.588112
[2026-03-09 02:47:28] 2026-03-09 01:46:30,467 | INFO     | chi2: 2.10178510723979
[2026-03-09 02:47:28] 2026-03-09 01:46:30,468 | INFO     | sum of square deviations: 3531973200.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,469 | INFO     | sum of deviations: 26715088653.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,469 | INFO     | mean x: 1773013632.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,469 | INFO     | mean y: 2319127.822222222
[2026-03-09 02:47:28] 2026-03-09 01:46:30,469 | INFO     | intersect: -13408376163.370111
[2026-03-09 02:47:28] 2026-03-09 01:46:30,470 | INFO     | chi2: 1.312985732622822
[2026-03-09 02:47:28] 2026-03-09 01:46:30,470 | INFO     | current chi2=1.312985732622822 (change=37.529972588533276 %)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,470 | INFO     | sum of square deviations: 3301699115.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,471 | INFO     | sum of deviations: 26047091469.499996
[2026-03-09 02:47:28] 2026-03-09 01:46:30,471 | INFO     | mean x: 1773013479.5
[2026-03-09 02:47:28] 2026-03-09 01:46:30,472 | INFO     | mean y: 2318685.3772727274
[2026-03-09 02:47:28] 2026-03-09 01:46:30,472 | INFO     | intersect: -13984977754.623425
[2026-03-09 02:47:28] 2026-03-09 01:46:30,472 | INFO     | chi2: 1.3135847949039599
[2026-03-09 02:47:28] 2026-03-09 01:46:30,472 | INFO     | current chi2=1.3135847949039599 (change=-0.04562595512299522 %)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,472 | INFO     | right removable region: 219
[2026-03-09 02:47:28] 2026-03-09 01:46:30,472 | INFO     | sum of square deviations: 3531973200.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,474 | INFO     | sum of deviations: -15947208284.000004
[2026-03-09 02:47:28] 2026-03-09 01:46:30,474 | INFO     | mean x: 1773013937.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,474 | INFO     | mean y: 2328492.151111111
[2026-03-09 02:47:28] 2026-03-09 01:46:30,474 | INFO     | intersect: 8007661755.657715
[2026-03-09 02:47:28] 2026-03-09 01:46:30,475 | INFO     | chi2: 0.8166873031421226
[2026-03-09 02:47:28] 2026-03-09 01:46:30,475 | INFO     | current chi2=0.8166873031421226 (change=61.14315872117617 %)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,475 | INFO     | sum of square deviations: 3301699115.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,476 | INFO     | sum of deviations: -15366456899.499998
[2026-03-09 02:47:28] 2026-03-09 01:46:30,476 | INFO     | mean x: 1773014089.5
[2026-03-09 02:47:28] 2026-03-09 01:46:30,476 | INFO     | mean y: 2328094.904545455
[2026-03-09 02:47:28] 2026-03-09 01:46:30,477 | INFO     | intersect: 8254123197.835354
[2026-03-09 02:47:28] 2026-03-09 01:46:30,477 | INFO     | chi2: 0.8142581794802096
[2026-03-09 02:47:28] 2026-03-09 01:46:30,477 | INFO     | current chi2=0.8142581794802096 (change=0.29743619774265334 %)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,477 | INFO     | left removable region: 20
[2026-03-09 02:47:28] 2026-03-09 01:46:30,477 | INFO     | sum of square deviations: 2443580700.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,479 | INFO     | sum of deviations: 1678117441.9999998
[2026-03-09 02:47:28] 2026-03-09 01:46:30,479 | INFO     | mean x: 1773014059.0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,479 | INFO     | mean y: 2335010.175879397
[2026-03-09 02:47:28] 2026-03-09 01:46:30,479 | INFO     | intersect: -1215273975.407906
[2026-03-09 02:47:28] 2026-03-09 01:46:30,479 | INFO     | chi2: 0.003301739480768598
[2026-03-09 02:47:28] 2026-03-09 01:46:30,479 | INFO     | current memory leak: 0.69 B/s (using 199 data points, chi2=0.00)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | could have reported an average CPU frequency of 2635 MHz (11 samples)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | ..............................
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . Timing measurements:
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . get job = 0 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . initial setup = 5 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . payload setup = 5 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . stage-in = 0 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . payload execution = 13987 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . stage-out = 1 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,480 | INFO     | . log creation = 0 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,481 | INFO     | ..............................
[2026-03-09 02:47:28] 2026-03-09 01:46:30,541 | INFO     | time since job start (14012s) is within the limit (349056.0s)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,769 | INFO     | 
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | job summary report
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | --------------------------------------------------
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | PanDA job id: 7043832762
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | task id: 48966988
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | errors: (none)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | pilot state: finished 
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | transexitcode: 0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | exeerrorcode: 0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | exeerrordiag: 
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | exitcode: 0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,770 | INFO     | exitmsg: OK
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | cpuconsumptiontime: 53582 s
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | nevents: 400
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | neventsw: 0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | pid: 3991950
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | pgrp: 3991950
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | corecount: 4
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | event service: False
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | sizes: {0: 2279793, 1: 2280310, 12: 2280310, 13996: 2310790, 13997: 2310789, 13998: 2319865, 14000: 2320243}
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | --------------------------------------------------
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | 
[2026-03-09 02:47:28] 2026-03-09 01:46:30,771 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot32/slots/0
[2026-03-09 02:47:28] 2026-03-09 01:46:30,822 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,822 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,822 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,824 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,824 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,824 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 02:47:28] 2026-03-09 01:46:30,824 | INFO     | job 7043832762 has completed (purged errors)
[2026-03-09 02:47:28] 2026-03-09 01:46:30,824 | INFO     | overall cleanup function is called
[2026-03-09 02:47:28] 2026-03-09 01:46:31,835 | INFO     | --- collectZombieJob: --- 10, [3991950]
[2026-03-09 02:47:28] 2026-03-09 01:46:31,836 | INFO     | zombie collector waiting for pid 3991950
[2026-03-09 02:47:28] 2026-03-09 01:46:31,836 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 02:47:28] 2026-03-09 01:46:31,836 | INFO     | collected zombie processes
[2026-03-09 02:47:28] 2026-03-09 01:46:31,836 | INFO     | will attempt to kill all subprocesses of pid=3991950
[2026-03-09 02:47:28] 2026-03-09 01:46:32,218 | INFO     | PID=3987133 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-09 02:47:28] 2026-03-09 01:46:32,218 | INFO     | .. there are 13 such processes running
[2026-03-09 02:47:28] 2026-03-09 01:46:32,394 | INFO     | process IDs to be killed: [3991950] (in reverse order)
[2026-03-09 02:47:28] 2026-03-09 01:46:32,530 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 02:47:28] 2026-03-09 01:46:32,535 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 02:47:28] 2026-03-09 01:46:32,549 | INFO     | did not find any defunct processes belonging to 3991950
[2026-03-09 02:47:28] 2026-03-09 01:46:32,561 | INFO     | did not find any defunct processes belonging to 3991950
[2026-03-09 02:47:28] 2026-03-09 01:46:32,562 | INFO     | ready for new job
[2026-03-09 02:47:28] 2026-03-09 01:46:32,562 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 02:47:28] 2026-03-09 01:46:32,564 | INFO     | **************************************
[2026-03-09 02:47:28] 2026-03-09 01:46:32,564 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 02:47:28] 2026-03-09 01:46:32,564 | INFO     | **************************************
[2026-03-09 02:47:28] 2026-03-09 01:46:32,564 | INFO     | 
[2026-03-09 02:47:28] 2026-03-09 01:46:32,568 | INFO     | architecture information:
[2026-03-09 02:47:28] 2026-03-09 01:46:32,568 | INFO     | executing command: cat /etc/os-release
[2026-03-09 02:47:28] 2026-03-09 01:46:32,589 | INFO     | cat /etc/os-release:
[2026-03-09 02:47:28] NAME="CentOS Linux"
[2026-03-09 02:47:28] VERSION="7 (Core)"
[2026-03-09 02:47:28] ID="centos"
[2026-03-09 02:47:28] ID_LIKE="rhel fedora"
[2026-03-09 02:47:28] VERSION_ID="7"
[2026-03-09 02:47:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 02:47:28] ANSI_COLOR="0;31"
[2026-03-09 02:47:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 02:47:28] HOME_URL="https://www.centos.org/"
[2026-03-09 02:47:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 02:47:28] 
[2026-03-09 02:47:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 02:47:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 02:47:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 02:47:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 02:47:28] 
[2026-03-09 02:47:28] 2026-03-09 01:46:32,589 | INFO     | **************************************
[2026-03-09 02:47:28] 2026-03-09 01:46:33,092 | INFO     | executing command: df -mP /var/lib/boinc/var/slot32/slots/0
[2026-03-09 02:47:28] 2026-03-09 01:46:33,109 | INFO     | sufficient remaining disk space (20943208448 B)
[2026-03-09 02:47:28] 2026-03-09 01:46:33,109 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 02:47:28] 2026-03-09 01:46:33,109 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 02:47:28] 2026-03-09 01:46:33,109 | INFO     | update_server=False
[2026-03-09 02:47:28] 2026-03-09 01:46:33,109 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 02:47:28] 2026-03-09 01:46:33,110 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:47:28] 2026-03-09 01:46:33,110 | INFO     | aborting loop
[2026-03-09 02:47:28] 2026-03-09 01:46:33,110 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-03-09 02:47:28] 2026-03-09 01:46:33,111 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 02:47:28] 2026-03-09 01:46:33,111 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 02:47:28] 2026-03-09 01:46:33,111 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 02:47:28] 2026-03-09 01:46:33,233 | INFO     | all data control threads have been joined
[2026-03-09 02:47:28] 2026-03-09 01:46:33,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 02:47:28] 2026-03-09 01:46:33,598 | INFO     | all payload control threads have been joined
[2026-03-09 02:47:28] 2026-03-09 01:46:34,115 | INFO     | [job] retrieve thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:34,115 | INFO     | [job] job monitor thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:34,130 | INFO     | [payload] validate_post thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:34,170 | INFO     | all job control threads have been joined
[2026-03-09 02:47:28] 2026-03-09 01:46:34,239 | INFO     | [data] control thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:34,338 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:34,604 | INFO     | [payload] control thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:34,894 | INFO     | [job] validate thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,029 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,174 | INFO     | [payload] failed_post thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,175 | INFO     | [job] control thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,263 | INFO     | [data] copytool_out thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,306 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,416 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,541 | INFO     | [data] copytool_in thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:35,579 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:47:28] 2026-03-09 01:46:36,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 02:47:28] 2026-03-09 01:46:36,584 | INFO     | [job] queue monitor thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:46:40,454 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 02:47:28] 2026-03-09 01:47:21,233 | INFO     | [monitor] cgroup control has ended
[2026-03-09 02:47:28] 2026-03-09 01:47:23,106 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22767942682432)>', '<ExcThread(monitor, started 22767704749824)>']
[2026-03-09 02:47:28] 2026-03-09 01:47:23,361 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 02:47:28] 2026-03-09 01:47:23,362 | INFO     | [monitor] control thread has ended
[2026-03-09 02:47:28] 2026-03-09 01:47:28,131 | INFO     | all workflow threads have been joined
[2026-03-09 02:47:28] 2026-03-09 01:47:28,132 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 02:47:28] 2026-03-09 01:47:28,132 | INFO     | traces error code: 0
[2026-03-09 02:47:28] 2026-03-09 01:47:28,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 02:47:28] 2026-03-09 01:47:28,279 [wrapper] ==== pilot stdout END ====
[2026-03-09 02:47:28] 2026-03-09 01:47:28,282 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 02:47:28] 2026-03-09 01:47:28,285 [wrapper] pilotpid: 3987133
[2026-03-09 02:47:28] 2026-03-09 01:47:28,287 [wrapper] Pilot exit status: 0
[2026-03-09 02:47:28] 2026-03-09 01:47:28,301 [wrapper] pandaids: 7043832762
[2026-03-09 02:47:28] 2026-03-09 01:47:28,381 [wrapper] cleanup supervisor_pilot   62789 3987134
[2026-03-09 02:47:28] 2026-03-09 01:47:28,389 [wrapper] Test setup, not cleaning
[2026-03-09 02:47:28] 2026-03-09 01:47:28,392 [wrapper] apfmon messages muted
[2026-03-09 02:47:28] 2026-03-09 01:47:28,395 [wrapper] ==== wrapper stdout END ====
[2026-03-09 02:47:28] 2026-03-09 01:47:28,398 [wrapper] ==== wrapper stderr END ====
[2026-03-09 02:47:28]  *** Error codes and diagnostics ***
[2026-03-09 02:47:28]     "exeErrorCode": 0,
[2026-03-09 02:47:28]     "exeErrorDiag": "",
[2026-03-09 02:47:28]     "pilotErrorCode": 0,
[2026-03-09 02:47:28]     "pilotErrorDiag": "",
[2026-03-09 02:47:28]  *** Listing of results directory ***
[2026-03-09 02:47:28] total 408084
[2026-03-09 02:47:28] -rwx------. 1 boinc boinc     36322 Mar  7 00:36 runpilot2-wrapper.sh
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc      5111 Mar  7 00:36 queuedata.json
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc    584627 Mar  7 00:36 pilot3.tar.gz
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc       100 Mar  8 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 02:47:28] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 22:52 run_atlas
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc       105 Mar  8 22:52 job.xml
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc      6560 Mar  8 22:52 init_data.xml
[2026-03-09 02:47:28] -rw-r--r--. 2 boinc boinc 213173058 Mar  8 22:52 EVNT.48966985._000490.pool.root.1
[2026-03-09 02:47:28] -rw-r--r--. 2 boinc boinc     15845 Mar  8 22:52 start_atlas.sh
[2026-03-09 02:47:28] drwxrwx--x. 2 boinc boinc      4096 Mar  8 22:52 shared
[2026-03-09 02:47:28] -rw-r--r--. 2 boinc boinc    597963 Mar  8 22:52 input.tar.gz
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc         0 Mar  8 22:52 boinc_lockfile
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc      2592 Mar  8 22:52 pandaJob.out
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc    999108 Mar  8 22:52 agis_schedconf.cvmfs.json
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc       448 Mar  8 22:52 workernode_map.json
[2026-03-09 02:47:28] drwx------. 5 boinc boinc      4096 Mar  8 22:52 pilot3
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc 196023202 Mar  9 02:45 HITS.48966988._012254.pool.root.1
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc       530 Mar  9 02:46 boinc_task_state.xml
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc      1035 Mar  9 02:46 memory_monitor_summary.json
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc        95 Mar  9 02:46 pilot_heartbeat.json
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc   1511578 Mar  9 02:46 agis_ddmendpoints.agis.ALL.json
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc    404179 Mar  9 02:46 log.48966988._012254.job.log.tgz.1
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc      6399 Mar  9 02:46 heartbeat.json
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc      8192 Mar  9 02:47 boinc_mmap_file
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc        28 Mar  9 02:47 wrapper_checkpoint.txt
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc      4557 Mar  9 02:47 pilotlog.txt
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc   1969987 Mar  9 02:47 log.48966988._012254.job.log.1
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc       357 Mar  9 02:47 output.list
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc       620 Mar  9 02:47 runtime_log
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc   2396160 Mar  9 02:47 result.tar.gz
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc      9205 Mar  9 02:47 runtime_log.err
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc       665 Mar  9 02:47 gKuNDmgttI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmKkRLDmdfqRum.diag
[2026-03-09 02:47:28] -rw-r--r--. 1 boinc boinc     20955 Mar  9 02:47 stderr.txt
[2026-03-09 02:47:28] HITS file was successfully produced:
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc 196023202 Mar  9 02:45 shared/HITS.pool.root.1
[2026-03-09 02:47:28]  *** Contents of shared directory: ***
[2026-03-09 02:47:28] total 402560
[2026-03-09 02:47:28] -rw-r--r--. 2 boinc boinc 213173058 Mar  8 22:52 ATLAS.root_0
[2026-03-09 02:47:28] -rw-r--r--. 2 boinc boinc     15845 Mar  8 22:52 start_atlas.sh
[2026-03-09 02:47:28] -rw-r--r--. 2 boinc boinc    597963 Mar  8 22:52 input.tar.gz
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc 196023202 Mar  9 02:45 HITS.pool.root.1
[2026-03-09 02:47:28] -rw-------. 1 boinc boinc   2396160 Mar  9 02:47 result.tar.gz
02:47:29 (3983351): run_atlas exited; CPU time 54134.557079
02:47:29 (3983351): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN