Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:37:29 (3452133): wrapper (7.7.26015): starting
22:37:29 (3452133): wrapper: running run_atlas (--nthreads 8)
[2026-03-06 22:37:29] Arguments: --nthreads 8
[2026-03-06 22:37:29] Threads: 8
[2026-03-06 22:37:29] Checking for CVMFS
[2026-03-06 22:37:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 22:37:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 22:37:30] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 22:37:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 22:37:31] 2.13.3.0 16090 174911 572344 156983 3 163 20675074 32935937 44584 16776704 0 1787986434 99.580 1942303302 50997 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-03-06 22:37:31] CVMFS is ok
[2026-03-06 22:37:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 22:37:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 22:37:31] Further information can be found at the LHC@home message board.
[2026-03-06 22:37:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 22:37:31] Checking for apptainer binary...
[2026-03-06 22:37:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 22:37:31] Running /usr/bin/apptainer --version
[2026-03-06 22:37:32] apptainer version 1.4.5-2.el9
[2026-03-06 22:37:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 22:37:32] c7-9-15.aglt2.org
[2026-03-06 22:37:32] apptainer works
[2026-03-06 22:37:32] Set ATHENA_PROC_NUMBER=8
[2026-03-06 22:37:32] Set ATHENA_CORE_NUMBER=8
[2026-03-06 22:37:32] Starting ATLAS job with PandaID=7032222941
[2026-03-06 22:37:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 03:02:18]  *** The last 200 lines of the pilot log: ***
[2026-03-07 03:02:18] 2026-03-07 08:01:18,984 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7032222941/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,045 | INFO     | extracted standard info from prmon json
[2026-03-07 03:02:18] 2026-03-07 08:01:19,045 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 03:02:18] 2026-03-07 08:01:19,045 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 03:02:18] 2026-03-07 08:01:19,045 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 03:02:18] 2026-03-07 08:01:19,045 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 03:02:18] 2026-03-07 08:01:19,056 | INFO     | fitting pss+swap vs Time
[2026-03-07 03:02:18] 2026-03-07 08:01:19,056 | INFO     | sum of square deviations: 5202338784.4375
[2026-03-07 03:02:18] 2026-03-07 08:01:19,057 | INFO     | sum of deviations: 59746918858.34375
[2026-03-07 03:02:18] 2026-03-07 08:01:19,057 | INFO     | mean x: 1772862674.578125
[2026-03-07 03:02:18] 2026-03-07 08:01:19,057 | INFO     | mean y: 2485957.6328125
[2026-03-07 03:02:18] 2026-03-07 08:01:19,057 | INFO     | intersect: -20358180033.953197
[2026-03-07 03:02:18] 2026-03-07 08:01:19,057 | INFO     | chi2: 5.648301969142497
[2026-03-07 03:02:18] 2026-03-07 08:01:19,058 | INFO     | sum of square deviations: 4903436954.406372
[2026-03-07 03:02:18] 2026-03-07 08:01:19,097 | INFO     | sum of deviations: 75922470617.49017
[2026-03-07 03:02:18] 2026-03-07 08:01:19,097 | INFO     | mean x: 1772862522.0796812
[2026-03-07 03:02:18] 2026-03-07 08:01:19,097 | INFO     | mean y: 2494068.625498008
[2026-03-07 03:02:18] 2026-03-07 08:01:19,097 | INFO     | intersect: -27447660586.771572
[2026-03-07 03:02:18] 2026-03-07 08:01:19,097 | INFO     | chi2: 4.883387372615161
[2026-03-07 03:02:18] 2026-03-07 08:01:19,097 | INFO     | current chi2=4.883387372615161 (change=13.542381421995083 %)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,097 | INFO     | right removable region: 250
[2026-03-07 03:02:18] 2026-03-07 08:01:19,098 | INFO     | sum of square deviations: 4903424754.406372
[2026-03-07 03:02:18] 2026-03-07 08:01:19,099 | INFO     | sum of deviations: -25369481957.015934
[2026-03-07 03:02:18] 2026-03-07 08:01:19,099 | INFO     | mean x: 1772862827.0796812
[2026-03-07 03:02:18] 2026-03-07 08:01:19,099 | INFO     | mean y: 2529331.800796813
[2026-03-07 03:02:18] 2026-03-07 08:01:19,099 | INFO     | intersect: 9175018715.561571
[2026-03-07 03:02:18] 2026-03-07 08:01:19,099 | INFO     | chi2: 1.4608575913846709
[2026-03-07 03:02:18] 2026-03-07 08:01:19,099 | INFO     | current chi2=1.4608575913846709 (change=74.13634045478534 %)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,099 | INFO     | sum of square deviations: 4616185361.874007
[2026-03-07 03:02:18] 2026-03-07 08:01:19,100 | INFO     | sum of deviations: -50633186912.30484
[2026-03-07 03:02:18] 2026-03-07 08:01:19,136 | INFO     | mean x: 1772862979.5813007
[2026-03-07 03:02:18] 2026-03-07 08:01:19,136 | INFO     | mean y: 2542672.8902439023
[2026-03-07 03:02:18] 2026-03-07 08:01:19,136 | INFO     | intersect: 19448404478.275806
[2026-03-07 03:02:18] 2026-03-07 08:01:19,136 | INFO     | chi2: 0.9649035542366342
[2026-03-07 03:02:18] 2026-03-07 08:01:19,136 | INFO     | current chi2=0.9649035542366342 (change=33.94951294861997 %)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,137 | INFO     | sum of square deviations: 4340388044.340255
[2026-03-07 03:02:18] 2026-03-07 08:01:19,140 | INFO     | sum of deviations: -51852661589.55186
[2026-03-07 03:02:18] 2026-03-07 08:01:19,140 | INFO     | mean x: 1772863132.0829875
[2026-03-07 03:02:18] 2026-03-07 08:01:19,140 | INFO     | mean y: 2543315.377593361
[2026-03-07 03:02:18] 2026-03-07 08:01:19,140 | INFO     | intersect: 21182140875.177174
[2026-03-07 03:02:18] 2026-03-07 08:01:19,140 | INFO     | chi2: 0.9418838894616997
[2026-03-07 03:02:18] 2026-03-07 08:01:19,140 | INFO     | current chi2=0.9418838894616997 (change=2.385695925137942 %)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,163 | INFO     | left removable region: 30
[2026-03-07 03:02:18] 2026-03-07 08:01:19,164 | INFO     | sum of square deviations: 3301752939.181835
[2026-03-07 03:02:18] 2026-03-07 08:01:19,164 | INFO     | sum of deviations: -12817270528.318182
[2026-03-07 03:02:18] 2026-03-07 08:01:19,168 | INFO     | mean x: 1772863406.590909
[2026-03-07 03:02:18] 2026-03-07 08:01:19,168 | INFO     | mean y: 2539517.7409090907
[2026-03-07 03:02:18] 2026-03-07 08:01:19,168 | INFO     | intersect: 6884723106.456724
[2026-03-07 03:02:18] 2026-03-07 08:01:19,169 | INFO     | chi2: 0.05558580199677186
[2026-03-07 03:02:18] 2026-03-07 08:01:19,169 | INFO     | current memory leak: -3.88 B/s (using 220 data points, chi2=0.06)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,169 | INFO     | could have reported an average CPU frequency of 3779 MHz (12 samples)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,173 | INFO     | ..............................
[2026-03-07 03:02:18] 2026-03-07 08:01:19,173 | INFO     | . Timing measurements:
[2026-03-07 03:02:18] 2026-03-07 08:01:19,173 | INFO     | . get job = 0 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,174 | INFO     | . initial setup = 47 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,174 | INFO     | . payload setup = 59 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,174 | INFO     | . stage-in = 0 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,174 | INFO     | . payload execution = 15612 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,174 | INFO     | . stage-out = 3 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,174 | INFO     | . log creation = 0 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,174 | INFO     | ..............................
[2026-03-07 03:02:18] 2026-03-07 08:01:19,541 | INFO     | 
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | job summary report
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | --------------------------------------------------
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | PanDA job id: 7032222941
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | task id: 48843720
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | errors: (none)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | pilot state: finished 
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | transexitcode: 0
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | exeerrorcode: 0
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | exeerrordiag: 
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | exitcode: 0
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | exitmsg: OK
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | cpuconsumptiontime: 47084 s
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | nevents: 400
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | neventsw: 0
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | pid: 3470259
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | pgrp: 3470259
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | corecount: 8
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | event service: False
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | sizes: {0: 2295451, 1: 2295912, 12: 2295912, 15676: 2327098, 15680: 2336096, 15683: 2336152, 15684: 2336474}
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | --------------------------------------------------
[2026-03-07 03:02:18] 2026-03-07 08:01:19,542 | INFO     | 
[2026-03-07 03:02:18] 2026-03-07 08:01:19,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-03-07 03:02:18] 2026-03-07 08:01:19,598 | INFO     | PID=3461435 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 03:02:18] 2026-03-07 08:01:19,598 | INFO     | .. there are 58 such processes running
[2026-03-07 03:02:18] 2026-03-07 08:01:19,693 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,694 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 03:02:18] 2026-03-07 08:01:19,695 | INFO     | job 7032222941 has completed (purged errors)
[2026-03-07 03:02:18] 2026-03-07 08:01:19,695 | INFO     | overall cleanup function is called
[2026-03-07 03:02:18] 2026-03-07 08:01:20,708 | INFO     | --- collectZombieJob: --- 10, [3470259]
[2026-03-07 03:02:18] 2026-03-07 08:01:20,708 | INFO     | zombie collector waiting for pid 3470259
[2026-03-07 03:02:18] 2026-03-07 08:01:20,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 03:02:18] 2026-03-07 08:01:20,708 | INFO     | collected zombie processes
[2026-03-07 03:02:18] 2026-03-07 08:01:20,708 | INFO     | will attempt to kill all subprocesses of pid=3470259
[2026-03-07 03:02:18] 2026-03-07 08:01:21,517 | INFO     | process IDs to be killed: [3470259] (in reverse order)
[2026-03-07 03:02:18] 2026-03-07 08:01:21,868 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 03:02:18] 2026-03-07 08:01:21,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 03:02:18] 2026-03-07 08:01:21,920 | INFO     | did not find any defunct processes belonging to 3470259
[2026-03-07 03:02:18] 2026-03-07 08:01:21,973 | INFO     | did not find any defunct processes belonging to 3470259
[2026-03-07 03:02:18] 2026-03-07 08:01:21,974 | INFO     | ready for new job
[2026-03-07 03:02:18] 2026-03-07 08:01:21,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 03:02:18] 2026-03-07 08:01:21,975 | INFO     | **************************************
[2026-03-07 03:02:18] 2026-03-07 08:01:21,975 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 03:02:18] 2026-03-07 08:01:21,975 | INFO     | **************************************
[2026-03-07 03:02:18] 2026-03-07 08:01:21,976 | INFO     | 
[2026-03-07 03:02:18] 2026-03-07 08:01:21,988 | INFO     | architecture information:
[2026-03-07 03:02:18] 2026-03-07 08:01:21,997 | INFO     | executing command: cat /etc/os-release
[2026-03-07 03:02:18] 2026-03-07 08:01:22,058 | INFO     | cat /etc/os-release:
[2026-03-07 03:02:18] NAME="CentOS Linux"
[2026-03-07 03:02:18] VERSION="7 (Core)"
[2026-03-07 03:02:18] ID="centos"
[2026-03-07 03:02:18] ID_LIKE="rhel fedora"
[2026-03-07 03:02:18] VERSION_ID="7"
[2026-03-07 03:02:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 03:02:18] ANSI_COLOR="0;31"
[2026-03-07 03:02:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 03:02:18] HOME_URL="https://www.centos.org/"
[2026-03-07 03:02:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 03:02:18] 
[2026-03-07 03:02:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 03:02:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 03:02:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 03:02:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 03:02:18] 
[2026-03-07 03:02:18] 2026-03-07 08:01:22,058 | INFO     | **************************************
[2026-03-07 03:02:18] 2026-03-07 08:01:22,570 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-03-07 03:02:18] 2026-03-07 08:01:22,614 | INFO     | sufficient remaining disk space (72764882944 B)
[2026-03-07 03:02:18] 2026-03-07 08:01:22,614 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 03:02:18] 2026-03-07 08:01:22,614 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 03:02:18] 2026-03-07 08:01:22,614 | INFO     | update_server=False
[2026-03-07 03:02:18] 2026-03-07 08:01:22,614 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 03:02:18] 2026-03-07 08:01:22,615 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 03:02:18] 2026-03-07 08:01:22,884 | INFO     | all data control threads have been joined
[2026-03-07 03:02:18] 2026-03-07 08:01:23,096 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 03:02:18] 2026-03-07 08:01:23,096 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 03:02:18] 2026-03-07 08:01:23,096 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 03:02:18] 2026-03-07 08:01:23,096 | INFO     | will abort loop
[2026-03-07 03:02:18] 2026-03-07 08:01:23,574 | INFO     | all payload control threads have been joined
[2026-03-07 03:02:18] 2026-03-07 08:01:23,619 | INFO     | [job] retrieve thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:23,675 | INFO     | all job control threads have been joined
[2026-03-07 03:02:18] 2026-03-07 08:01:23,869 | INFO     | [job] validate thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:23,890 | INFO     | [data] control thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,101 | INFO     | [job] job monitor thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,528 | INFO     | [payload] validate_post thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,558 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 03:02:18] 2026-03-07 08:01:24,588 | INFO     | [payload] control thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,590 | INFO     | [data] copytool_in thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,637 | INFO     | [data] copytool_out thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,662 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,681 | INFO     | [job] control thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:24,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 03:02:18] 2026-03-07 08:01:25,055 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:25,075 | INFO     | [payload] failed_post thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:25,112 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:25,588 | INFO     | [job] queue monitor thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:28,857 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 03:02:18] 2026-03-07 08:01:52,759 | INFO     | PID=3461435 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 03:02:18] 2026-03-07 08:01:52,759 | INFO     | .. there are 57 such processes running
[2026-03-07 03:02:18] 2026-03-07 08:01:52,761 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 03:02:18] 2026-03-07 08:01:52,761 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 03:02:18] 2026-03-07 08:01:52,761 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 03:02:18] 2026-03-07 08:02:09,921 | INFO     | [monitor] cgroup control has ended
[2026-03-07 03:02:18] 2026-03-07 08:02:11,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139783009785664)>', '<ExcThread(monitor, started 139782361429760)>']
[2026-03-07 03:02:18] 2026-03-07 08:02:11,915 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 03:02:18] 2026-03-07 08:02:11,915 | INFO     | [monitor] control thread has ended
[2026-03-07 03:02:18] 2026-03-07 08:02:16,676 | INFO     | all workflow threads have been joined
[2026-03-07 03:02:18] 2026-03-07 08:02:16,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 03:02:18] 2026-03-07 08:02:16,677 | INFO     | traces error code: 0
[2026-03-07 03:02:18] 2026-03-07 08:02:16,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 03:02:18] 2026-03-07 08:02:17,211 [wrapper] ==== pilot stdout END ====
[2026-03-07 03:02:18] 2026-03-07 08:02:17,263 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 03:02:18] 2026-03-07 08:02:17,288 [wrapper] pilotpid: 3461435
[2026-03-07 03:02:18] 2026-03-07 08:02:17,308 [wrapper] Pilot exit status: 0
[2026-03-07 03:02:18] 2026-03-07 08:02:17,454 [wrapper] pandaids: 7032222941
[2026-03-07 03:02:18] 2026-03-07 08:02:17,878 [wrapper] cleanup supervisor_pilot  537101 3461436
[2026-03-07 03:02:18] 2026-03-07 08:02:17,913 [wrapper] Test setup, not cleaning
[2026-03-07 03:02:18] 2026-03-07 08:02:17,938 [wrapper] apfmon messages muted
[2026-03-07 03:02:18] 2026-03-07 08:02:17,964 [wrapper] ==== wrapper stdout END ====
[2026-03-07 03:02:18] 2026-03-07 08:02:17,991 [wrapper] ==== wrapper stderr END ====
[2026-03-07 03:02:18]  *** Error codes and diagnostics ***
[2026-03-07 03:02:18]     "exeErrorCode": 0,
[2026-03-07 03:02:18]     "exeErrorDiag": "",
[2026-03-07 03:02:18]     "pilotErrorCode": 0,
[2026-03-07 03:02:18]     "pilotErrorDiag": "",
[2026-03-07 03:02:18]  *** Listing of results directory ***
[2026-03-07 03:02:18] total 471316
[2026-03-07 03:02:18] -rwx------. 1 boincer umatlas     36322 Feb 27 15:39 runpilot2-wrapper.sh
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas      5111 Feb 27 15:42 queuedata.json
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas    584627 Feb 27 15:42 pilot3.tar.gz
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas       100 Mar  6 22:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 03:02:18] -rwxr-xr-x. 1 boincer umatlas      7986 Mar  6 22:37 run_atlas
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas       105 Mar  6 22:37 job.xml
[2026-03-07 03:02:18] -rw-r--r--. 2 boincer umatlas 248727580 Mar  6 22:37 EVNT.48451626._000002.pool.root.1
[2026-03-07 03:02:18] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 22:37 start_atlas.sh
[2026-03-07 03:02:18] drwxrwx--x. 2 boincer umatlas      4096 Mar  6 22:37 shared
[2026-03-07 03:02:18] -rw-r--r--. 2 boincer umatlas    597973 Mar  6 22:37 input.tar.gz
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas         0 Mar  6 22:37 boinc_lockfile
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas      2623 Mar  6 22:37 pandaJob.out
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas        57 Mar  6 22:37 setup.sh.local
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas    999186 Mar  6 22:38 agis_schedconf.cvmfs.json
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas       431 Mar  6 22:39 workernode_map.json
[2026-03-07 03:02:18] drwx------. 5 boincer umatlas      4096 Mar  6 22:39 pilot3
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas      7171 Mar  7 02:57 init_data.xml
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas 225120502 Mar  7 03:00 HITS.48843720._000028.pool.root.1
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas       531 Mar  7 03:00 boinc_task_state.xml
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas      1039 Mar  7 03:01 memory_monitor_summary.json
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas   1521291 Mar  7 03:01 agis_ddmendpoints.agis.ALL.json
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas    456539 Mar  7 03:01 log.48843720._000028.job.log.tgz.1
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas      6328 Mar  7 03:01 heartbeat.json
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas        95 Mar  7 03:01 pilot_heartbeat.json
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas        28 Mar  7 03:02 wrapper_checkpoint.txt
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas      8192 Mar  7 03:02 boinc_mmap_file
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas      5006 Mar  7 03:02 pilotlog.txt
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas   1961251 Mar  7 03:02 log.48843720._000028.job.log.1
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas       357 Mar  7 03:02 output.list
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas       620 Mar  7 03:02 runtime_log
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas   2437120 Mar  7 03:02 result.tar.gz
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas      9337 Mar  7 03:02 runtime_log.err
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas       654 Mar  7 03:02 hmwMDmqnJG9n9Rq4apOajLDm4fhM0noT9bVooX4SDm733KDmSm8WMn.diag
[2026-03-07 03:02:18] -rw-r--r--. 1 boincer umatlas     21242 Mar  7 03:02 stderr.txt
[2026-03-07 03:02:18] HITS file was successfully produced:
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas 225120502 Mar  7 03:00 shared/HITS.pool.root.1
[2026-03-07 03:02:18]  *** Contents of shared directory: ***
[2026-03-07 03:02:18] total 465736
[2026-03-07 03:02:18] -rw-r--r--. 2 boincer umatlas 248727580 Mar  6 22:37 ATLAS.root_0
[2026-03-07 03:02:18] -rw-r--r--. 2 boincer umatlas     15845 Mar  6 22:37 start_atlas.sh
[2026-03-07 03:02:18] -rw-r--r--. 2 boincer umatlas    597973 Mar  6 22:37 input.tar.gz
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas 225120502 Mar  7 03:00 HITS.pool.root.1
[2026-03-07 03:02:18] -rw-------. 1 boincer umatlas   2437120 Mar  7 03:02 result.tar.gz
03:02:20 (3452133): run_atlas exited; CPU time 47634.339794
03:02:20 (3452133): called boinc_finish(0)

</stderr_txt>
]]>

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