Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:35:52 (373523): wrapper (7.7.26015): starting
22:35:52 (373523): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 22:35:52] Arguments: --nthreads 4
[2026-03-07 22:35:52] Threads: 4
[2026-03-07 22:35:52] Checking for CVMFS
[2026-03-07 22:35:52] No cvmfs_config command found, will try listing directly
[2026-03-07 22:35:52] CVMFS is ok
[2026-03-07 22:35:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 22:35:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 22:35:52] Further information can be found at the LHC@home message board.
[2026-03-07 22:35:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 22:35:52] Checking for apptainer binary...
[2026-03-07 22:35:52] which: no apptainer in ((null))
[2026-03-07 22:35:52] apptainer is not installed, using version from CVMFS
[2026-03-07 22:35:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 22:35:52] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot60/slots/9/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-07 22:35:52] apptainer works
[2026-03-07 22:35:52] Set ATHENA_PROC_NUMBER=4
[2026-03-07 22:35:52] Set ATHENA_CORE_NUMBER=4
[2026-03-07 22:35:52] Starting ATLAS job with PandaID=7043790519
[2026-03-07 22:35:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot60/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 00:08:19]  *** The last 200 lines of the pilot log: ***
[2026-03-08 00:08:19]  is_altstaged=None
[2026-03-08 00:08:19]  is_tar=False
[2026-03-08 00:08:19]  lfn=log.48958643._000051.job.log.tgz.1
[2026-03-08 00:08:19]  mtime=0
[2026-03-08 00:08:19]  protocol_id=None
[2026-03-08 00:08:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 00:08:19]  replicas=None
[2026-03-08 00:08:19]  scope=mc23_13p6TeV
[2026-03-08 00:08:19]  status=None
[2026-03-08 00:08:19]  status_code=0
[2026-03-08 00:08:19]  storage_token=
[2026-03-08 00:08:19]  surl=/var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7043790519/log.48958643._000051.job.log.tgz.1
[2026-03-08 00:08:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/e4/log.48958643._000051.job.log.tgz.1
[2026-03-08 00:08:19]  workdir=None
[2026-03-08 00:08:19] ]
[2026-03-08 00:08:19] 2026-03-07 23:07:26,202 | INFO     | transferring file log.48958643._000051.job.log.tgz.1 from /var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7043790519/log.48958643._000051.job.log.tgz.1 to /var/lib/b
[2026-03-08 00:08:19] 2026-03-07 23:07:26,202 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7043790519/log.48958643._000051.job.log.tgz.1 /var/lib/boinc/var/slot60/slots/9/lo
[2026-03-08 00:08:19] 2026-03-07 23:07:26,217 | INFO     | adding to output.list: log.48958643._000051.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/e4/log.48958643._000051.job.log.tg
[2026-03-08 00:08:19] 2026-03-07 23:07:26,218 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 00:08:19] 2026-03-07 23:07:26,218 | INFO     | summary of transferred files:
[2026-03-08 00:08:19] 2026-03-07 23:07:26,218 | INFO     |  -- lfn=log.48958643._000051.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 00:08:19] 2026-03-07 23:07:26,218 | INFO     | stage-out finished correctly
[2026-03-08 00:08:19] 2026-03-07 23:07:26,394 | INFO     | time since job start (5481s) is within the limit (349056.0s)
[2026-03-08 00:08:19] 2026-03-07 23:07:28,402 | INFO     | time since job start (5483s) is within the limit (349056.0s)
[2026-03-08 00:08:19] 2026-03-07 23:07:28,567 | WARNING  | process 386881 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 00:08:19] 2026-03-07 23:07:28,567 | INFO     | using path: /var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7043790519/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,021 | INFO     | number of running child processes to parent process 386881: 1
[2026-03-08 00:08:19] 2026-03-07 23:07:29,021 | INFO     | maximum number of monitored processes: 6
[2026-03-08 00:08:19] 2026-03-07 23:07:29,078 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 00:08:19] 2026-03-07 23:07:29,125 | INFO     | job 7043790519 has state=finished
[2026-03-08 00:08:19] 2026-03-07 23:07:29,125 | INFO     | preparing for final server update for job 7043790519 in state='finished'
[2026-03-08 00:08:19] 2026-03-07 23:07:29,126 | INFO     | reading metadata from: /var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7043790519/jobReport.json
[2026-03-08 00:08:19] 2026-03-07 23:07:29,127 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot60/slots/9/workernode_map.json
[2026-03-08 00:08:19] 2026-03-07 23:07:29,127 | INFO     | this job has now completed (state=finished)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,127 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,127 | INFO     | log transfer has been attempted: DONE
[2026-03-08 00:08:19] 2026-03-07 23:07:29,127 | INFO     | job 7043790519 has finished - writing final server update
[2026-03-08 00:08:19] 2026-03-07 23:07:29,127 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_220474/.job.ad'
[2026-03-08 00:08:19] 2026-03-07 23:07:29,128 | INFO     | total number of processed events: 400 (read)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,145 | INFO     | using path: /var/lib/boinc/var/slot60/slots/9/PanDA_Pilot-7043790519/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,146 | INFO     | extracted standard info from prmon json
[2026-03-08 00:08:19] 2026-03-07 23:07:29,146 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 00:08:19] 2026-03-07 23:07:29,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 00:08:19] 2026-03-07 23:07:29,146 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 00:08:19] 2026-03-07 23:07:29,146 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 00:08:19] 2026-03-07 23:07:29,147 | INFO     | fitting pss+swap vs Time
[2026-03-08 00:08:19] 2026-03-07 23:07:29,147 | INFO     | sum of square deviations: 177275882.0
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | sum of deviations: 659098046.0
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | mean x: 1772922192.0
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | mean y: 2343499.325301205
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | intersect: -6589244365.160613
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | chi2: 0.00032533595359792036
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | current memory leak: 3.72 B/s (using 83 data points, chi2=0.00)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | could have reported an average CPU frequency of 3592 MHz (7 samples)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | ..............................
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . Timing measurements:
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . get job = 0 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . initial setup = 5 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . payload setup = 5 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . stage-in = 0 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . payload execution = 5460 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . stage-out = 0 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | . log creation = 0 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,148 | INFO     | ..............................
[2026-03-08 00:08:19] 2026-03-07 23:07:29,196 | INFO     | 
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | job summary report
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | --------------------------------------------------
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | PanDA job id: 7043790519
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | task id: 48958643
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | errors: (none)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | pilot state: finished 
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | transexitcode: 0
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | exeerrorcode: 0
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | exeerrordiag: 
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | exitcode: 0
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | exitmsg: OK
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | cpuconsumptiontime: 20697 s
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | nevents: 400
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | neventsw: 0
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | pid: 386881
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | pgrp: 386881
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | corecount: 4
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | event service: False
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | sizes: {0: 2295777, 11: 2295777, 5469: 2322462, 5470: 2331482, 5473: 2331732}
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | --------------------------------------------------
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | 
[2026-03-08 00:08:19] 2026-03-07 23:07:29,197 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot60/slots/9
[2026-03-08 00:08:19] 2026-03-07 23:07:29,218 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,218 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,218 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | job 7043790519 has completed (purged errors)
[2026-03-08 00:08:19] 2026-03-07 23:07:29,219 | INFO     | overall cleanup function is called
[2026-03-08 00:08:19] 2026-03-07 23:07:30,226 | INFO     | --- collectZombieJob: --- 10, [386881]
[2026-03-08 00:08:19] 2026-03-07 23:07:30,226 | INFO     | zombie collector waiting for pid 386881
[2026-03-08 00:08:19] 2026-03-07 23:07:30,226 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 00:08:19] 2026-03-07 23:07:30,226 | INFO     | collected zombie processes
[2026-03-08 00:08:19] 2026-03-07 23:07:30,227 | INFO     | will attempt to kill all subprocesses of pid=386881
[2026-03-08 00:08:19] 2026-03-07 23:07:30,683 | INFO     | process IDs to be killed: [386881] (in reverse order)
[2026-03-08 00:08:19] 2026-03-07 23:07:30,937 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 00:08:19] 2026-03-07 23:07:30,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 00:08:19] 2026-03-07 23:07:30,967 | INFO     | did not find any defunct processes belonging to 386881
[2026-03-08 00:08:19] 2026-03-07 23:07:30,995 | INFO     | did not find any defunct processes belonging to 386881
[2026-03-08 00:08:19] 2026-03-07 23:07:30,996 | INFO     | ready for new job
[2026-03-08 00:08:19] 2026-03-07 23:07:30,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 00:08:19] 2026-03-07 23:07:30,997 | INFO     | **************************************
[2026-03-08 00:08:19] 2026-03-07 23:07:30,997 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 00:08:19] 2026-03-07 23:07:30,997 | INFO     | **************************************
[2026-03-08 00:08:19] 2026-03-07 23:07:30,997 | INFO     | 
[2026-03-08 00:08:19] 2026-03-07 23:07:31,003 | INFO     | architecture information:
[2026-03-08 00:08:19] 2026-03-07 23:07:31,003 | INFO     | executing command: cat /etc/os-release
[2026-03-08 00:08:19] 2026-03-07 23:07:31,018 | INFO     | cat /etc/os-release:
[2026-03-08 00:08:19] NAME="CentOS Linux"
[2026-03-08 00:08:19] VERSION="7 (Core)"
[2026-03-08 00:08:19] ID="centos"
[2026-03-08 00:08:19] ID_LIKE="rhel fedora"
[2026-03-08 00:08:19] VERSION_ID="7"
[2026-03-08 00:08:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 00:08:19] ANSI_COLOR="0;31"
[2026-03-08 00:08:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 00:08:19] HOME_URL="https://www.centos.org/"
[2026-03-08 00:08:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 00:08:19] 
[2026-03-08 00:08:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 00:08:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 00:08:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 00:08:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 00:08:19] 
[2026-03-08 00:08:19] 2026-03-07 23:07:31,018 | INFO     | **************************************
[2026-03-08 00:08:19] 2026-03-07 23:07:31,520 | INFO     | executing command: df -mP /var/lib/boinc/var/slot60/slots/9
[2026-03-08 00:08:19] 2026-03-07 23:07:31,538 | INFO     | sufficient remaining disk space (21351104512 B)
[2026-03-08 00:08:19] 2026-03-07 23:07:31,538 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 00:08:19] 2026-03-07 23:07:31,538 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 00:08:19] 2026-03-07 23:07:31,538 | INFO     | update_server=False
[2026-03-08 00:08:19] 2026-03-07 23:07:31,538 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 00:08:19] 2026-03-07 23:07:31,539 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 00:08:19] 2026-03-07 23:07:31,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 00:08:19] 2026-03-07 23:07:31,876 | INFO     | all data control threads have been joined
[2026-03-08 00:08:19] 2026-03-07 23:07:32,322 | INFO     | all payload control threads have been joined
[2026-03-08 00:08:19] 2026-03-07 23:07:32,530 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 00:08:19] 2026-03-07 23:07:32,530 | INFO     | aborting loop
[2026-03-08 00:08:19] 2026-03-07 23:07:32,543 | INFO     | [job] retrieve thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:32,584 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:32,598 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:32,605 | INFO     | [job] validate thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:32,857 | INFO     | [payload] validate_post thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:32,881 | INFO     | [data] control thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:32,910 | INFO     | [data] copytool_in thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:33,016 | INFO     | all job control threads have been joined
[2026-03-08 00:08:19] 2026-03-07 23:07:33,327 | INFO     | [payload] control thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:33,535 | INFO     | [job] job monitor thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:33,782 | INFO     | [data] copytool_out thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:33,875 | INFO     | [payload] failed_post thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:33,906 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:34,021 | INFO     | [job] control thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:34,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 00:08:19] 2026-03-07 23:07:35,211 | INFO     | [job] queue monitor thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:35,545 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:07:42,087 | INFO     | job.realtimelogging is not enabled
[2026-03-08 00:08:19] 2026-03-07 23:07:43,092 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 00:08:19] 2026-03-07 23:08:02,018 | INFO     | PID=378569 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 00:08:19] 2026-03-07 23:08:02,018 | INFO     | .. there are 50 such processes running
[2026-03-08 00:08:19] 2026-03-07 23:08:02,019 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 00:08:19] 2026-03-07 23:08:02,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 00:08:19] 2026-03-07 23:08:02,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 00:08:19] 2026-03-07 23:08:13,767 | INFO     | [monitor] cgroup control has ended
[2026-03-08 00:08:19] 2026-03-07 23:08:14,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22641794213696)>', '<ExcThread(monitor, started 22641552660224)>']
[2026-03-08 00:08:19] 2026-03-07 23:08:14,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 00:08:19] 2026-03-07 23:08:14,074 | INFO     | [monitor] control thread has ended
[2026-03-08 00:08:19] 2026-03-07 23:08:19,036 | INFO     | all workflow threads have been joined
[2026-03-08 00:08:19] 2026-03-07 23:08:19,036 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 00:08:19] 2026-03-07 23:08:19,036 | INFO     | traces error code: 0
[2026-03-08 00:08:19] 2026-03-07 23:08:19,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 00:08:19] 2026-03-07 23:08:19,232 [wrapper] ==== pilot stdout END ====
[2026-03-08 00:08:19] 2026-03-07 23:08:19,234 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 00:08:19] 2026-03-07 23:08:19,236 [wrapper] pilotpid: 378569
[2026-03-08 00:08:19] 2026-03-07 23:08:19,237 [wrapper] Pilot exit status: 0
[2026-03-08 00:08:19] 2026-03-07 23:08:19,245 [wrapper] pandaids: 7043790519
[2026-03-08 00:08:19] 2026-03-07 23:08:19,366 [wrapper] cleanup supervisor_pilot 1099297 378570
[2026-03-08 00:08:19] 2026-03-07 23:08:19,369 [wrapper] Test setup, not cleaning
[2026-03-08 00:08:19] 2026-03-07 23:08:19,372 [wrapper] apfmon messages muted
[2026-03-08 00:08:19] 2026-03-07 23:08:19,375 [wrapper] ==== wrapper stdout END ====
[2026-03-08 00:08:19] 2026-03-07 23:08:19,377 [wrapper] ==== wrapper stderr END ====
[2026-03-08 00:08:19]  *** Error codes and diagnostics ***
[2026-03-08 00:08:19]     "exeErrorCode": 0,
[2026-03-08 00:08:19]     "exeErrorDiag": "",
[2026-03-08 00:08:19]     "pilotErrorCode": 0,
[2026-03-08 00:08:19]     "pilotErrorDiag": "",
[2026-03-08 00:08:19]  *** Listing of results directory ***
[2026-03-08 00:08:19] total 441080
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc    584627 Mar  6 23:29 pilot3.tar.gz
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc      5111 Mar  6 23:29 queuedata.json
[2026-03-08 00:08:19] -rwx------. 1 boinc boinc     36322 Mar  6 23:29 runpilot2-wrapper.sh
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc       100 Mar  7 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 00:08:19] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 22:35 run_atlas
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc       105 Mar  7 22:35 job.xml
[2026-03-08 00:08:19] -rw-r--r--. 2 boinc boinc 260473898 Mar  7 22:35 EVNT.48958641._000009.pool.root.1
[2026-03-08 00:08:19] drwxrwx--x. 2 boinc boinc      4096 Mar  7 22:35 shared
[2026-03-08 00:08:19] -rw-r--r--. 2 boinc boinc    597933 Mar  7 22:35 input.tar.gz
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc      6704 Mar  7 22:35 init_data.xml
[2026-03-08 00:08:19] -rw-r--r--. 2 boinc boinc     15845 Mar  7 22:35 start_atlas.sh
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc         0 Mar  7 22:35 boinc_lockfile
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc      2539 Mar  7 22:35 pandaJob.out
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc    999169 Mar  7 22:36 agis_schedconf.cvmfs.json
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc   1521291 Mar  7 22:36 agis_ddmendpoints.agis.ALL.json
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc       444 Mar  7 22:36 workernode_map.json
[2026-03-08 00:08:19] drwx------. 5 boinc boinc      4096 Mar  7 22:36 pilot3
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc       529 Mar  8 00:06 boinc_task_state.xml
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc 185141235 Mar  8 00:07 HITS.48958643._000051.pool.root.1
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc      1029 Mar  8 00:07 memory_monitor_summary.json
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc    259637 Mar  8 00:07 log.48958643._000051.job.log.tgz.1
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc      6339 Mar  8 00:07 heartbeat.json
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc        27 Mar  8 00:07 wrapper_checkpoint.txt
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc      8192 Mar  8 00:07 boinc_mmap_file
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc        95 Mar  8 00:08 pilot_heartbeat.json
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc      4900 Mar  8 00:08 pilotlog.txt
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc    794549 Mar  8 00:08 log.48958643._000051.job.log.1
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc       357 Mar  8 00:08 output.list
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc       620 Mar  8 00:08 runtime_log
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc   1075200 Mar  8 00:08 result.tar.gz
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc      9204 Mar  8 00:08 runtime_log.err
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc       663 Mar  8 00:08 Y8xKDmsqsI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrpTLDmfdMh7n.diag
[2026-03-08 00:08:19] -rw-r--r--. 1 boinc boinc     21328 Mar  8 00:08 stderr.txt
[2026-03-08 00:08:19] HITS file was successfully produced:
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc 185141235 Mar  8 00:07 shared/HITS.pool.root.1
[2026-03-08 00:08:19]  *** Contents of shared directory: ***
[2026-03-08 00:08:19] total 436836
[2026-03-08 00:08:19] -rw-r--r--. 2 boinc boinc 260473898 Mar  7 22:35 ATLAS.root_0
[2026-03-08 00:08:19] -rw-r--r--. 2 boinc boinc    597933 Mar  7 22:35 input.tar.gz
[2026-03-08 00:08:19] -rw-r--r--. 2 boinc boinc     15845 Mar  7 22:35 start_atlas.sh
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc 185141235 Mar  8 00:07 HITS.pool.root.1
[2026-03-08 00:08:19] -rw-------. 1 boinc boinc   1075200 Mar  8 00:08 result.tar.gz
00:08:21 (373523): run_atlas exited; CPU time 20949.676780
00:08:21 (373523): called boinc_finish(0)

</stderr_txt>
]]>

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