Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:31:59 (2219949): wrapper (7.7.26015): starting
11:31:59 (2219949): wrapper: running run_atlas (--nthreads 4)
[2026-03-10 11:31:59] Arguments: --nthreads 4
[2026-03-10 11:31:59] Threads: 4
[2026-03-10 11:31:59] Checking for CVMFS
[2026-03-10 11:31:59] No cvmfs_config command found, will try listing directly
[2026-03-10 11:31:59] CVMFS is ok
[2026-03-10 11:31:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-10 11:31:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-10 11:31:59] Further information can be found at the LHC@home message board.
[2026-03-10 11:31:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-10 11:31:59] Checking for apptainer binary...
[2026-03-10 11:31:59] which: no apptainer in ((null))
[2026-03-10 11:31:59] apptainer is not installed, using version from CVMFS
[2026-03-10 11:31:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-10 11:31:59] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-03-10 11:31:59] apptainer works
[2026-03-10 11:31:59] Set ATHENA_PROC_NUMBER=4
[2026-03-10 11:31:59] Set ATHENA_CORE_NUMBER=4
[2026-03-10 11:31:59] Starting ATLAS job with PandaID=7044317850
[2026-03-10 11:31:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-10 14:58:41]  *** The last 200 lines of the pilot log: ***
[2026-03-10 14:58:41] 2026-03-10 13:57:53,457 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-10 14:58:41] 2026-03-10 13:57:54,175 | INFO     | job 7044317850 has state=finished
[2026-03-10 14:58:41] 2026-03-10 13:57:54,175 | INFO     | preparing for final server update for job 7044317850 in state='finished'
[2026-03-10 14:58:41] 2026-03-10 13:57:54,175 | INFO     | reading metadata from: /var/lib/boinc/var/slot44/slots/0/PanDA_Pilot-7044317850/jobReport.json
[2026-03-10 14:58:41] 2026-03-10 13:57:54,178 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot44/slots/0/workernode_map.json
[2026-03-10 14:58:41] 2026-03-10 13:57:54,178 | INFO     | this job has now completed (state=finished)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,178 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,178 | INFO     | log transfer has been attempted: DONE
[2026-03-10 14:58:41] 2026-03-10 13:57:54,178 | INFO     | job 7044317850 has finished - writing final server update
[2026-03-10 14:58:41] 2026-03-10 13:57:54,179 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_42872/.job.ad'
[2026-03-10 14:58:41] 2026-03-10 13:57:54,179 | INFO     | total number of processed events: 400 (read)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,190 | INFO     | using path: /var/lib/boinc/var/slot44/slots/0/PanDA_Pilot-7044317850/memory_monitor_summary.json (trf name=prmon)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,190 | INFO     | extracted standard info from prmon json
[2026-03-10 14:58:41] 2026-03-10 13:57:54,190 | INFO     | extracted standard memory fields from prmon json
[2026-03-10 14:58:41] 2026-03-10 13:57:54,191 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-10 14:58:41] 2026-03-10 13:57:54,191 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-10 14:58:41] 2026-03-10 13:57:54,191 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-10 14:58:41] 2026-03-10 13:57:54,194 | INFO     | fitting pss+swap vs Time
[2026-03-10 14:58:41] 2026-03-10 13:57:54,195 | INFO     | sum of square deviations: 2555770710.5
[2026-03-10 14:58:41] 2026-03-10 13:57:54,196 | INFO     | sum of deviations: 21748271165.5
[2026-03-10 14:58:41] 2026-03-10 13:57:54,196 | INFO     | mean x: 1773144888.5
[2026-03-10 14:58:41] 2026-03-10 13:57:54,196 | INFO     | mean y: 2326255.381188119
[2026-03-10 14:58:41] 2026-03-10 13:57:54,196 | INFO     | intersect: -15086208757.712374
[2026-03-10 14:58:41] 2026-03-10 13:57:54,196 | INFO     | chi2: 1.335843684111203
[2026-03-10 14:58:41] 2026-03-10 13:57:54,197 | INFO     | sum of square deviations: 2370641658.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,198 | INFO     | sum of deviations: 21019312229.000008
[2026-03-10 14:58:41] 2026-03-10 13:57:54,198 | INFO     | mean x: 1773144736.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,198 | INFO     | mean y: 2325654.7106598984
[2026-03-10 14:58:41] 2026-03-10 13:57:54,198 | INFO     | intersect: -15719275586.632156
[2026-03-10 14:58:41] 2026-03-10 13:57:54,198 | INFO     | chi2: 1.3366594856468812
[2026-03-10 14:58:41] 2026-03-10 13:57:54,198 | INFO     | current chi2=1.3366594856468812 (change=-0.06107013458098385 %)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,198 | INFO     | right removable region: 196
[2026-03-10 14:58:41] 2026-03-10 13:57:54,199 | INFO     | sum of square deviations: 2370641658.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,200 | INFO     | sum of deviations: -4565273489.000001
[2026-03-10 14:58:41] 2026-03-10 13:57:54,200 | INFO     | mean x: 1773145041.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,200 | INFO     | mean y: 2347668.461928934
[2026-03-10 14:58:41] 2026-03-10 13:57:54,200 | INFO     | intersect: 3416989447.2022905
[2026-03-10 14:58:41] 2026-03-10 13:57:54,200 | INFO     | chi2: 0.01764127922977784
[2026-03-10 14:58:41] 2026-03-10 13:57:54,200 | INFO     | current chi2=0.01764127922977784 (change=98.67939045266996 %)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,201 | INFO     | sum of square deviations: 2194675568.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,202 | INFO     | sum of deviations: -4530162499.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,202 | INFO     | mean x: 1773145193.5
[2026-03-10 14:58:41] 2026-03-10 13:57:54,202 | INFO     | mean y: 2347620.875
[2026-03-10 14:58:41] 2026-03-10 13:57:54,202 | INFO     | intersect: 3662403794.096043
[2026-03-10 14:58:41] 2026-03-10 13:57:54,202 | INFO     | chi2: 0.014622135483738644
[2026-03-10 14:58:41] 2026-03-10 13:57:54,202 | INFO     | current chi2=0.014622135483738644 (change=17.114086267298514 %)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,203 | INFO     | left removable region: 20
[2026-03-10 14:58:41] 2026-03-10 13:57:54,203 | INFO     | sum of square deviations: 1690450300.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,204 | INFO     | sum of deviations: -1728476358.0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,204 | INFO     | mean x: 1773145315.5
[2026-03-10 14:58:41] 2026-03-10 13:57:54,204 | INFO     | mean y: 2344658.25
[2026-03-10 14:58:41] 2026-03-10 13:57:54,204 | INFO     | intersect: 1815376225.7206323
[2026-03-10 14:58:41] 2026-03-10 13:57:54,204 | INFO     | chi2: 0.011074642026195385
[2026-03-10 14:58:41] 2026-03-10 13:57:54,204 | INFO     | current memory leak: -1.02 B/s (using 176 data points, chi2=0.01)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | could have reported an average CPU frequency of 2561 MHz (10 samples)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | ..............................
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . Timing measurements:
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . get job = 0 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . initial setup = 6 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . payload setup = 5 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . stage-in = 0 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . payload execution = 12312 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . stage-out = 1 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,205 | INFO     | . log creation = 0 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,206 | INFO     | ..............................
[2026-03-10 14:58:41] 2026-03-10 13:57:54,295 | INFO     | 
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | job summary report
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | --------------------------------------------------
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | PanDA job id: 7044317850
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | task id: 48958577
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | errors: (none)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | pilot state: finished 
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | transexitcode: 0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | exeerrorcode: 0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | exeerrordiag: 
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | exitcode: 0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,296 | INFO     | exitmsg: OK
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | cpuconsumptiontime: 46021 s
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | nevents: 400
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | neventsw: 0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | pid: 2228594
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | pgrp: 2228594
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | corecount: 4
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | event service: False
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | sizes: {0: 2280003, 1: 2280209, 11: 2280237, 12322: 2310401, 12324: 2319421, 12326: 2319477, 12327: 2319799}
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | --------------------------------------------------
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | 
[2026-03-10 14:58:41] 2026-03-10 13:57:54,297 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot44/slots/0
[2026-03-10 14:58:41] 2026-03-10 13:57:54,320 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-10 14:58:41] 2026-03-10 13:57:54,322 | INFO     | job 7044317850 has completed (purged errors)
[2026-03-10 14:58:41] 2026-03-10 13:57:54,323 | INFO     | overall cleanup function is called
[2026-03-10 14:58:41] 2026-03-10 13:57:55,331 | INFO     | --- collectZombieJob: --- 10, [2228594]
[2026-03-10 14:58:41] 2026-03-10 13:57:55,331 | INFO     | zombie collector waiting for pid 2228594
[2026-03-10 14:58:41] 2026-03-10 13:57:55,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-10 14:58:41] 2026-03-10 13:57:55,331 | INFO     | collected zombie processes
[2026-03-10 14:58:41] 2026-03-10 13:57:55,331 | INFO     | will attempt to kill all subprocesses of pid=2228594
[2026-03-10 14:58:41] 2026-03-10 13:57:55,766 | INFO     | process IDs to be killed: [2228594] (in reverse order)
[2026-03-10 14:58:41] 2026-03-10 13:57:55,913 | WARNING  | found no corresponding commands to process id(s)
[2026-03-10 14:58:41] 2026-03-10 13:57:55,913 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-10 14:58:41] 2026-03-10 13:57:55,927 | INFO     | did not find any defunct processes belonging to 2228594
[2026-03-10 14:58:41] 2026-03-10 13:57:55,940 | INFO     | did not find any defunct processes belonging to 2228594
[2026-03-10 14:58:41] 2026-03-10 13:57:55,941 | INFO     | ready for new job
[2026-03-10 14:58:41] 2026-03-10 13:57:55,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-10 14:58:41] 2026-03-10 13:57:55,943 | INFO     | **************************************
[2026-03-10 14:58:41] 2026-03-10 13:57:55,943 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-10 14:58:41] 2026-03-10 13:57:55,943 | INFO     | **************************************
[2026-03-10 14:58:41] 2026-03-10 13:57:55,943 | INFO     | 
[2026-03-10 14:58:41] 2026-03-10 13:57:55,947 | INFO     | architecture information:
[2026-03-10 14:58:41] 2026-03-10 13:57:55,948 | INFO     | executing command: cat /etc/os-release
[2026-03-10 14:58:41] 2026-03-10 13:57:55,966 | INFO     | cat /etc/os-release:
[2026-03-10 14:58:41] NAME="CentOS Linux"
[2026-03-10 14:58:41] VERSION="7 (Core)"
[2026-03-10 14:58:41] ID="centos"
[2026-03-10 14:58:41] ID_LIKE="rhel fedora"
[2026-03-10 14:58:41] VERSION_ID="7"
[2026-03-10 14:58:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-10 14:58:41] ANSI_COLOR="0;31"
[2026-03-10 14:58:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-10 14:58:41] HOME_URL="https://www.centos.org/"
[2026-03-10 14:58:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-10 14:58:41] 
[2026-03-10 14:58:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-10 14:58:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-10 14:58:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-10 14:58:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-10 14:58:41] 
[2026-03-10 14:58:41] 2026-03-10 13:57:55,967 | INFO     | **************************************
[2026-03-10 14:58:41] 2026-03-10 13:57:56,469 | INFO     | executing command: df -mP /var/lib/boinc/var/slot44/slots/0
[2026-03-10 14:58:41] 2026-03-10 13:57:56,486 | INFO     | sufficient remaining disk space (20521680896 B)
[2026-03-10 14:58:41] 2026-03-10 13:57:56,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-10 14:58:41] 2026-03-10 13:57:56,487 | INFO     | current server update state: UPDATING_FINAL
[2026-03-10 14:58:41] 2026-03-10 13:57:56,487 | INFO     | update_server=False
[2026-03-10 14:58:41] 2026-03-10 13:57:56,487 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-10 14:58:41] 2026-03-10 13:57:56,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:58:41] 2026-03-10 13:57:56,488 | INFO     | aborting loop
[2026-03-10 14:58:41] 2026-03-10 13:57:56,488 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-10 14:58:41] 2026-03-10 13:57:56,678 | INFO     | all job control threads have been joined
[2026-03-10 14:58:41] 2026-03-10 13:57:57,079 | INFO     | all data control threads have been joined
[2026-03-10 14:58:41] 2026-03-10 13:57:57,492 | INFO     | [job] retrieve thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:57,493 | INFO     | [job] job monitor thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:57,582 | INFO     | [payload] validate_pre thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:57,683 | INFO     | [job] control thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:57,782 | INFO     | all payload control threads have been joined
[2026-03-10 14:58:41] 2026-03-10 13:57:57,924 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,084 | INFO     | [data] control thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,306 | INFO     | [job] create_data_payload thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,321 | INFO     | [payload] validate_post thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,493 | INFO     | [data] copytool_out thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,549 | INFO     | [payload] failed_post thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,702 | INFO     | [payload] execute_payloads thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,787 | INFO     | [payload] control thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,847 | INFO     | [data] copytool_in thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:58,934 | INFO     | [job] validate thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:57:59,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-10 14:58:41] 2026-03-10 13:57:59,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-10 14:58:41] 2026-03-10 13:58:00,310 | INFO     | [job] queue monitor thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:58:03,553 | INFO     | [data] queue_monitor thread has finished
[2026-03-10 14:58:41] 2026-03-10 13:58:26,433 | INFO     | PID=2223775 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-10 14:58:41] 2026-03-10 13:58:26,434 | INFO     | .. there are 12 such processes running
[2026-03-10 14:58:41] 2026-03-10 13:58:26,435 | INFO     | found 0 job(s) in 20 queues
[2026-03-10 14:58:41] 2026-03-10 13:58:26,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-10 14:58:41] 2026-03-10 13:58:26,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-10 14:58:41] 2026-03-10 13:58:35,966 | INFO     | [monitor] cgroup control has ended
[2026-03-10 14:58:41] 2026-03-10 13:58:36,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23418721064768)>', '<ExcThread(monitor, started 23418476168960)>']
[2026-03-10 14:58:41] 2026-03-10 13:58:36,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-10 14:58:41] 2026-03-10 13:58:36,482 | INFO     | [monitor] control thread has ended
[2026-03-10 14:58:41] 2026-03-10 13:58:41,263 | INFO     | all workflow threads have been joined
[2026-03-10 14:58:41] 2026-03-10 13:58:41,263 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-10 14:58:41] 2026-03-10 13:58:41,263 | INFO     | traces error code: 0
[2026-03-10 14:58:41] 2026-03-10 13:58:41,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-10 14:58:41] 2026-03-10 13:58:41,416 [wrapper] ==== pilot stdout END ====
[2026-03-10 14:58:41] 2026-03-10 13:58:41,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-10 14:58:41] 2026-03-10 13:58:41,422 [wrapper] pilotpid: 2223775
[2026-03-10 14:58:41] 2026-03-10 13:58:41,424 [wrapper] Pilot exit status: 0
[2026-03-10 14:58:41] 2026-03-10 13:58:41,435 [wrapper] pandaids: 7044317850
[2026-03-10 14:58:41] 2026-03-10 13:58:41,522 [wrapper] cleanup supervisor_pilot 2428566 2223776
[2026-03-10 14:58:41] 2026-03-10 13:58:41,526 [wrapper] Test setup, not cleaning
[2026-03-10 14:58:41] 2026-03-10 13:58:41,529 [wrapper] apfmon messages muted
[2026-03-10 14:58:41] 2026-03-10 13:58:41,532 [wrapper] ==== wrapper stdout END ====
[2026-03-10 14:58:41] 2026-03-10 13:58:41,535 [wrapper] ==== wrapper stderr END ====
[2026-03-10 14:58:41]  *** Error codes and diagnostics ***
[2026-03-10 14:58:41]     "exeErrorCode": 0,
[2026-03-10 14:58:41]     "exeErrorDiag": "",
[2026-03-10 14:58:41]     "pilotErrorCode": 0,
[2026-03-10 14:58:41]     "pilotErrorDiag": "",
[2026-03-10 14:58:41]  *** Listing of results directory ***
[2026-03-10 14:58:41] total 444396
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc      5111 Mar  7 03:33 queuedata.json
[2026-03-10 14:58:41] -rwx------. 1 boinc boinc     36322 Mar  7 03:33 runpilot2-wrapper.sh
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc    584627 Mar  7 03:33 pilot3.tar.gz
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc       100 Mar 10 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-10 14:58:41] -rwxr-xr-x. 1 boinc boinc      7986 Mar 10 11:31 run_atlas
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc       105 Mar 10 11:31 job.xml
[2026-03-10 14:58:41] -rw-r--r--. 2 boinc boinc 268424703 Mar 10 11:31 EVNT.48958575._000083.pool.root.1
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc      6562 Mar 10 11:31 init_data.xml
[2026-03-10 14:58:41] -rw-r--r--. 2 boinc boinc     15845 Mar 10 11:31 start_atlas.sh
[2026-03-10 14:58:41] drwxrwx--x. 2 boinc boinc      4096 Mar 10 11:31 shared
[2026-03-10 14:58:41] -rw-r--r--. 2 boinc boinc    597940 Mar 10 11:31 input.tar.gz
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc         0 Mar 10 11:31 boinc_lockfile
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc      2538 Mar 10 11:31 pandaJob.out
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc   1005414 Mar 10 11:32 agis_schedconf.cvmfs.json
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc       452 Mar 10 11:32 workernode_map.json
[2026-03-10 14:58:41] drwx------. 5 boinc boinc      4096 Mar 10 11:32 pilot3
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc 178456680 Mar 10 14:57 HITS.48958577._002142.pool.root.1
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc       529 Mar 10 14:57 boinc_task_state.xml
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc      1033 Mar 10 14:57 memory_monitor_summary.json
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc   1511578 Mar 10 14:57 agis_ddmendpoints.agis.ALL.json
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc    388683 Mar 10 14:57 log.48958577._002142.job.log.tgz.1
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc      6398 Mar 10 14:57 heartbeat.json
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc        95 Mar 10 14:58 pilot_heartbeat.json
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc      8192 Mar 10 14:58 boinc_mmap_file
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc        27 Mar 10 14:58 wrapper_checkpoint.txt
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc      4829 Mar 10 14:58 pilotlog.txt
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc   1730009 Mar 10 14:58 log.48958577._002142.job.log.1
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc       357 Mar 10 14:58 output.list
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc       620 Mar 10 14:58 runtime_log
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc   2140160 Mar 10 14:58 result.tar.gz
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc      9205 Mar 10 14:58 runtime_log.err
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc       665 Mar 10 14:58 rphKDm0ewI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAQULDmOXr8Em.diag
[2026-03-10 14:58:41] -rw-r--r--. 1 boinc boinc     21133 Mar 10 14:58 stderr.txt
[2026-03-10 14:58:41] HITS file was successfully produced:
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc 178456680 Mar 10 14:57 shared/HITS.pool.root.1
[2026-03-10 14:58:41]  *** Contents of shared directory: ***
[2026-03-10 14:58:41] total 439112
[2026-03-10 14:58:41] -rw-r--r--. 2 boinc boinc 268424703 Mar 10 11:31 ATLAS.root_0
[2026-03-10 14:58:41] -rw-r--r--. 2 boinc boinc     15845 Mar 10 11:31 start_atlas.sh
[2026-03-10 14:58:41] -rw-r--r--. 2 boinc boinc    597940 Mar 10 11:31 input.tar.gz
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc 178456680 Mar 10 14:57 HITS.pool.root.1
[2026-03-10 14:58:41] -rw-------. 1 boinc boinc   2140160 Mar 10 14:58 result.tar.gz
14:58:42 (2219949): run_atlas exited; CPU time 46574.989034
14:58:42 (2219949): called boinc_finish(0)

</stderr_txt>
]]>

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