Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:12 (1243): wrapper (7.7.26015): starting
11:16:12 (1243): wrapper: running run_atlas (--nthreads 8)
[2026-03-07 11:16:12] Arguments: --nthreads 8
[2026-03-07 11:16:12] Threads: 8
[2026-03-07 11:16:12] Checking for CVMFS
[2026-03-07 11:16:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 11:16:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 11:16:13] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 11:16:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 11:16:13] 2.11.2.0 10325 117362 129540 156995 2 133 24759530 25165824 94 130560 155 34380919 99.848 24700315 915 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-07 11:16:13] CVMFS is ok
[2026-03-07 11:16:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 11:16:13] Checking for apptainer binary...
[2026-03-07 11:16:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 11:16:13] Running /usr/bin/apptainer --version
[2026-03-07 11:16:13] apptainer version 1.3.2-1.el7
[2026-03-07 11:16:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 11:16:14] cg-vwn405.simple-grid.lan
[2026-03-07 11:16:14] apptainer works
[2026-03-07 11:16:15] Set ATHENA_PROC_NUMBER=8
[2026-03-07 11:16:15] Set ATHENA_CORE_NUMBER=8
[2026-03-07 11:16:15] Starting ATLAS job with PandaID=7043687653
[2026-03-07 11:16:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 16:11:20]  *** The last 200 lines of the pilot log: ***
[2026-03-07 16:11:21] 2026-03-07 15:10:36,506 | INFO     | total number of processed events: 400 (read)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,509 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7043687653/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,509 | INFO     | extracted standard info from prmon json
[2026-03-07 16:11:21] 2026-03-07 15:10:36,510 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 16:11:21] 2026-03-07 15:10:36,510 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 16:11:21] 2026-03-07 15:10:36,510 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 16:11:21] 2026-03-07 15:10:36,510 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 16:11:21] 2026-03-07 15:10:36,517 | INFO     | fitting pss+swap vs Time
[2026-03-07 16:11:21] 2026-03-07 15:10:36,517 | INFO     | sum of square deviations: 7484568240.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,520 | INFO     | sum of deviations: 36266860944.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,521 | INFO     | mean x: 1772887399.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,521 | INFO     | mean y: 2506981.4775086506
[2026-03-07 16:11:21] 2026-03-07 15:10:36,521 | INFO     | intersect: -8588110233.457903
[2026-03-07 16:11:21] 2026-03-07 15:10:36,522 | INFO     | chi2: 2.317786132099768
[2026-03-07 16:11:21] 2026-03-07 15:10:36,522 | INFO     | sum of square deviations: 7102775035.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,525 | INFO     | sum of deviations: 54848031659.99999
[2026-03-07 16:11:21] 2026-03-07 15:10:36,525 | INFO     | mean x: 1772887246.5
[2026-03-07 16:11:21] 2026-03-07 15:10:36,525 | INFO     | mean y: 2514294.676056338
[2026-03-07 16:11:21] 2026-03-07 15:10:36,526 | INFO     | intersect: -13687821573.55579
[2026-03-07 16:11:21] 2026-03-07 15:10:36,526 | INFO     | chi2: 1.5428653298952766
[2026-03-07 16:11:21] 2026-03-07 15:10:36,526 | INFO     | current chi2=1.5428653298952766 (change=33.43366290238617 %)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,527 | INFO     | sum of square deviations: 6734191380.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,530 | INFO     | sum of deviations: 53688042728.00001
[2026-03-07 16:11:21] 2026-03-07 15:10:36,530 | INFO     | mean x: 1772887094.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,530 | INFO     | mean y: 2513814.623655914
[2026-03-07 16:11:21] 2026-03-07 15:10:36,530 | INFO     | intersect: -14131750075.95674
[2026-03-07 16:11:21] 2026-03-07 15:10:36,531 | INFO     | chi2: 1.5432283262218944
[2026-03-07 16:11:21] 2026-03-07 15:10:36,531 | INFO     | current chi2=1.5432283262218944 (change=-0.023527414841999654 %)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,531 | INFO     | right removable region: 278
[2026-03-07 16:11:21] 2026-03-07 15:10:36,532 | INFO     | sum of square deviations: 7102775035.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,534 | INFO     | sum of deviations: -11686323270.000004
[2026-03-07 16:11:21] 2026-03-07 15:10:36,535 | INFO     | mean x: 1772887551.5
[2026-03-07 16:11:21] 2026-03-07 15:10:36,535 | INFO     | mean y: 2526012.2253521127
[2026-03-07 16:11:21] 2026-03-07 15:10:36,535 | INFO     | intersect: 2919489726.561517
[2026-03-07 16:11:21] 2026-03-07 15:10:36,535 | INFO     | chi2: 0.8578701411502733
[2026-03-07 16:11:21] 2026-03-07 15:10:36,536 | INFO     | current chi2=0.8578701411502733 (change=62.987519457927846 %)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,536 | INFO     | sum of square deviations: 6734191380.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,539 | INFO     | sum of deviations: -20938166918.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,539 | INFO     | mean x: 1772887704.0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,539 | INFO     | mean y: 2529817.0394265233
[2026-03-07 16:11:21] 2026-03-07 15:10:36,540 | INFO     | intersect: 5514849942.580881
[2026-03-07 16:11:21] 2026-03-07 15:10:36,540 | INFO     | chi2: 0.8027136485973371
[2026-03-07 16:11:21] 2026-03-07 15:10:36,540 | INFO     | current chi2=0.8027136485973371 (change=6.429468739753517 %)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,540 | INFO     | left removable region: 20
[2026-03-07 16:11:21] 2026-03-07 15:10:36,541 | INFO     | sum of square deviations: 5325139844.5
[2026-03-07 16:11:21] 2026-03-07 15:10:36,543 | INFO     | sum of deviations: -1765041923.5
[2026-03-07 16:11:21] 2026-03-07 15:10:36,543 | INFO     | mean x: 1772887673.5
[2026-03-07 16:11:21] 2026-03-07 15:10:36,544 | INFO     | mean y: 2537526.507751938
[2026-03-07 16:11:21] 2026-03-07 15:10:36,544 | INFO     | intersect: 590169243.3754046
[2026-03-07 16:11:21] 2026-03-07 15:10:36,544 | INFO     | chi2: 0.012908939356987717
[2026-03-07 16:11:21] 2026-03-07 15:10:36,544 | INFO     | current memory leak: -0.33 B/s (using 258 data points, chi2=0.01)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,545 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,545 | INFO     | ..............................
[2026-03-07 16:11:21] 2026-03-07 15:10:36,545 | INFO     | . Timing measurements:
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | . get job = 0 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | . initial setup = 7 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | . payload setup = 7 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | . stage-in = 0 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | . payload execution = 17617 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | . stage-out = 4 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | . log creation = 1 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,546 | INFO     | ..............................
[2026-03-07 16:11:21] 2026-03-07 15:10:36,637 | INFO     | time since job start (17638s) is within the limit (349056.0s)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,696 | INFO     | 
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | job summary report
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | --------------------------------------------------
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | PanDA job id: 7043687653
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | task id: 48958627
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | errors: (none)
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | pilot state: finished 
[2026-03-07 16:11:21] 2026-03-07 15:10:36,697 | INFO     | transexitcode: 0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | exeerrorcode: 0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | exeerrordiag: 
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | exitcode: 0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | exitmsg: OK
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | cpuconsumptiontime: 66707 s
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | nevents: 400
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | neventsw: 0
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | pid: 17033
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | pgrp: 17033
[2026-03-07 16:11:21] 2026-03-07 15:10:36,698 | INFO     | corecount: 8
[2026-03-07 16:11:21] 2026-03-07 15:10:36,699 | INFO     | event service: False
[2026-03-07 16:11:21] 2026-03-07 15:10:36,699 | INFO     | sizes: {0: 2295375, 1: 2295779, 17629: 2327863, 17634: 2336861, 17637: 2337111}
[2026-03-07 16:11:21] 2026-03-07 15:10:36,699 | INFO     | --------------------------------------------------
[2026-03-07 16:11:21] 2026-03-07 15:10:36,699 | INFO     | 
[2026-03-07 16:11:21] 2026-03-07 15:10:36,699 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-03-07 16:11:21] 2026-03-07 15:10:37,350 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,350 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,350 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,350 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,351 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,352 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,352 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 16:11:21] 2026-03-07 15:10:37,352 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,352 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 16:11:21] 2026-03-07 15:10:37,352 | INFO     | job 7043687653 has completed (purged errors)
[2026-03-07 16:11:21] 2026-03-07 15:10:37,352 | INFO     | overall cleanup function is called
[2026-03-07 16:11:21] 2026-03-07 15:10:38,361 | INFO     | --- collectZombieJob: --- 10, [17033]
[2026-03-07 16:11:21] 2026-03-07 15:10:38,362 | INFO     | zombie collector waiting for pid 17033
[2026-03-07 16:11:21] 2026-03-07 15:10:38,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 16:11:21] 2026-03-07 15:10:38,362 | INFO     | collected zombie processes
[2026-03-07 16:11:21] 2026-03-07 15:10:38,362 | INFO     | will attempt to kill all subprocesses of pid=17033
[2026-03-07 16:11:21] 2026-03-07 15:10:38,458 | INFO     | process IDs to be killed: [17033] (in reverse order)
[2026-03-07 16:11:21] 2026-03-07 15:10:39,245 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 16:11:21] 2026-03-07 15:10:39,245 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 16:11:21] 2026-03-07 15:10:39,248 | INFO     | did not find any defunct processes belonging to 17033
[2026-03-07 16:11:21] 2026-03-07 15:10:39,250 | INFO     | did not find any defunct processes belonging to 17033
[2026-03-07 16:11:21] 2026-03-07 15:10:39,250 | INFO     | ready for new job
[2026-03-07 16:11:21] 2026-03-07 15:10:39,250 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 16:11:21] 2026-03-07 15:10:39,252 | INFO     | **************************************
[2026-03-07 16:11:21] 2026-03-07 15:10:39,253 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 16:11:21] 2026-03-07 15:10:39,253 | INFO     | **************************************
[2026-03-07 16:11:21] 2026-03-07 15:10:39,253 | INFO     | 
[2026-03-07 16:11:21] 2026-03-07 15:10:39,254 | INFO     | pilot is running in a VM
[2026-03-07 16:11:21] 2026-03-07 15:10:39,254 | INFO     | architecture information:
[2026-03-07 16:11:21] 2026-03-07 15:10:39,269 | INFO     | executing command: cat /etc/os-release
[2026-03-07 16:11:21] 2026-03-07 15:10:39,517 | INFO     | cat /etc/os-release:
[2026-03-07 16:11:21] NAME="CentOS Linux"
[2026-03-07 16:11:21] VERSION="7 (Core)"
[2026-03-07 16:11:21] ID="centos"
[2026-03-07 16:11:21] ID_LIKE="rhel fedora"
[2026-03-07 16:11:21] VERSION_ID="7"
[2026-03-07 16:11:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 16:11:21] ANSI_COLOR="0;31"
[2026-03-07 16:11:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 16:11:21] HOME_URL="https://www.centos.org/"
[2026-03-07 16:11:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 16:11:21] 
[2026-03-07 16:11:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 16:11:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 16:11:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 16:11:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 16:11:21] 
[2026-03-07 16:11:21] 2026-03-07 15:10:39,517 | INFO     | **************************************
[2026-03-07 16:11:21] 2026-03-07 15:10:40,021 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-03-07 16:11:21] 2026-03-07 15:10:40,234 | INFO     | sufficient remaining disk space (495763587072 B)
[2026-03-07 16:11:21] 2026-03-07 15:10:40,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 16:11:21] 2026-03-07 15:10:40,235 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 16:11:21] 2026-03-07 15:10:40,235 | INFO     | update_server=False
[2026-03-07 16:11:21] 2026-03-07 15:10:40,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 16:11:21] 2026-03-07 15:10:40,235 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:11:21] 2026-03-07 15:10:40,236 | INFO     | aborting loop
[2026-03-07 16:11:21] 2026-03-07 15:10:40,439 | INFO     | all data control threads have been joined
[2026-03-07 16:11:21] 2026-03-07 15:10:40,744 | INFO     | all payload control threads have been joined
[2026-03-07 16:11:21] 2026-03-07 15:10:41,074 | INFO     | all job control threads have been joined
[2026-03-07 16:11:21] 2026-03-07 15:10:41,241 | INFO     | [job] retrieve thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,242 | INFO     | [job] job monitor thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,355 | INFO     | [payload] failed_post thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,397 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,411 | INFO     | [payload] validate_post thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,445 | INFO     | [data] control thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,463 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,486 | INFO     | [job] validate thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:41,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 16:11:21] 2026-03-07 15:10:41,710 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 16:11:21] 2026-03-07 15:10:41,750 | INFO     | [payload] control thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:42,080 | INFO     | [job] control thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:42,173 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:42,441 | INFO     | [data] copytool_in thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:42,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 16:11:21] 2026-03-07 15:10:42,716 | INFO     | [job] queue monitor thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:43,504 | INFO     | [data] copytool_out thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:46,523 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:10:50,687 | INFO     | job.realtimelogging is not enabled
[2026-03-07 16:11:21] 2026-03-07 15:10:51,693 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 16:11:21] 2026-03-07 15:11:08,949 | INFO     | [monitor] cgroup control has ended
[2026-03-07 16:11:21] 2026-03-07 15:11:09,756 | INFO     | PID=11525 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-03-07 16:11:21] 2026-03-07 15:11:09,756 | INFO     | .. there are 2 such processes running
[2026-03-07 16:11:21] 2026-03-07 15:11:09,756 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 16:11:21] 2026-03-07 15:11:09,757 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 16:11:21] 2026-03-07 15:11:09,757 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 16:11:21] 2026-03-07 15:11:10,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140614069057344)>', '<ExcThread(monitor, started 140613320169216)>']
[2026-03-07 16:11:21] 2026-03-07 15:11:10,762 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 16:11:21] 2026-03-07 15:11:10,763 | INFO     | [monitor] control thread has ended
[2026-03-07 16:11:21] 2026-03-07 15:11:15,535 | INFO     | all workflow threads have been joined
[2026-03-07 16:11:21] 2026-03-07 15:11:15,536 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 16:11:21] 2026-03-07 15:11:15,536 | INFO     | traces error code: 0
[2026-03-07 16:11:21] 2026-03-07 15:11:15,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 16:11:21] 2026-03-07 15:11:15,906 [wrapper] ==== pilot stdout END ====
[2026-03-07 16:11:21] 2026-03-07 15:11:15,994 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 16:11:21] 2026-03-07 15:11:16,086 [wrapper] pilotpid: 11525
[2026-03-07 16:11:21] 2026-03-07 15:11:16,194 [wrapper] Pilot exit status: 0
[2026-03-07 16:11:21] 2026-03-07 15:11:16,722 [wrapper] pandaids: 7043687653
[2026-03-07 16:11:21] 2026-03-07 15:11:18,013 [wrapper] cleanup supervisor_pilot 24475 11526
[2026-03-07 16:11:21] 2026-03-07 15:11:18,123 [wrapper] Test setup, not cleaning
[2026-03-07 16:11:21] 2026-03-07 15:11:18,193 [wrapper] apfmon messages muted
[2026-03-07 16:11:21] 2026-03-07 15:11:18,305 [wrapper] ==== wrapper stdout END ====
[2026-03-07 16:11:21] 2026-03-07 15:11:18,414 [wrapper] ==== wrapper stderr END ====
[2026-03-07 16:11:21]  *** Error codes and diagnostics ***
[2026-03-07 16:11:21]     "exeErrorCode": 0,
[2026-03-07 16:11:21]     "exeErrorDiag": "",
[2026-03-07 16:11:21]     "pilotErrorCode": 0,
[2026-03-07 16:11:21]     "pilotErrorDiag": "",
[2026-03-07 16:11:21]  *** Listing of results directory ***
[2026-03-07 16:11:21] total 472904
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc    584627 Mar  6 21:52 pilot3.tar.gz
[2026-03-07 16:11:21] -rwx------. 1 boinc boinc     36322 Mar  6 21:53 runpilot2-wrapper.sh
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc      5111 Mar  6 21:54 queuedata.json
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc       100 Mar  7 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 16:11:21] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 11:16 run_atlas
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc       105 Mar  7 11:16 job.xml
[2026-03-07 16:11:21] -rw-r--r--. 2 boinc boinc 276120348 Mar  7 11:16 EVNT.48958625._000157.pool.root.1
[2026-03-07 16:11:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 11:16 start_atlas.sh
[2026-03-07 16:11:21] drwxrwx--x. 2 boinc boinc        68 Mar  7 11:16 shared
[2026-03-07 16:11:21] -rw-r--r--. 2 boinc boinc    597938 Mar  7 11:16 input.tar.gz
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc      6391 Mar  7 11:16 init_data.xml
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc         0 Mar  7 11:16 boinc_lockfile
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc      2521 Mar  7 11:16 pandaJob.out
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc    999153 Mar  7 11:16 agis_schedconf.cvmfs.json
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc       415 Mar  7 11:16 workernode_map.json
[2026-03-07 16:11:21] drwx------. 5 boinc boinc      4096 Mar  7 11:16 pilot3
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc 198243504 Mar  7 16:09 HITS.48958627._004068.pool.root.1
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc       530 Mar  7 16:09 boinc_task_state.xml
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc      1018 Mar  7 16:10 memory_monitor_summary.json
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc   1521291 Mar  7 16:10 agis_ddmendpoints.agis.ALL.json
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc    517166 Mar  7 16:10 log.48958627._004068.job.log.tgz.1
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc      6310 Mar  7 16:10 heartbeat.json
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc        95 Mar  7 16:10 pilot_heartbeat.json
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc      8192 Mar  7 16:10 boinc_mmap_file
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc        28 Mar  7 16:10 wrapper_checkpoint.txt
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc      4952 Mar  7 16:11 pilotlog.txt
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc   2464039 Mar  7 16:11 log.48958627._004068.job.log.1
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc       357 Mar  7 16:11 output.list
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc       620 Mar  7 16:11 runtime_log
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc   3000320 Mar  7 16:11 result.tar.gz
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc      8816 Mar  7 16:11 runtime_log.err
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc       656 Mar  7 16:11 0hhLDmqLrI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmcSRLDmgr9F6n.diag
[2026-03-07 16:11:21] -rw-r--r--. 1 boinc boinc     20662 Mar  7 16:11 stderr.txt
[2026-03-07 16:11:21] HITS file was successfully produced:
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc 198243504 Mar  7 16:09 shared/HITS.pool.root.1
[2026-03-07 16:11:21]  *** Contents of shared directory: ***
[2026-03-07 16:11:21] total 466784
[2026-03-07 16:11:21] -rw-r--r--. 2 boinc boinc 276120348 Mar  7 11:16 ATLAS.root_0
[2026-03-07 16:11:21] -rw-r--r--. 2 boinc boinc     15845 Mar  7 11:16 start_atlas.sh
[2026-03-07 16:11:21] -rw-r--r--. 2 boinc boinc    597938 Mar  7 11:16 input.tar.gz
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc 198243504 Mar  7 16:09 HITS.pool.root.1
[2026-03-07 16:11:21] -rw-------. 1 boinc boinc   3000320 Mar  7 16:11 result.tar.gz
16:11:22 (1243): run_atlas exited; CPU time 66881.317253
16:11:22 (1243): called boinc_finish(0)

</stderr_txt>
]]>

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