Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:56:16 (1370098): wrapper (7.7.26015): starting
21:56:16 (1370098): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 21:56:16] Arguments: --nthreads 12
[2026-03-06 21:56:16] Threads: 12
[2026-03-06 21:56:16] Checking for CVMFS
[2026-03-06 21:56:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 21:56:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 21:56:16] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 21:56:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 21:56:17] 2.11.5.0 3233586 73775 232456 156990 3 396 26319166 45568000 20232 130560 0 758041993 99.839 394342960 22162 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-03-06 21:56:17] CVMFS is ok
[2026-03-06 21:56:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 21:56:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 21:56:17] Further information can be found at the LHC@home message board.
[2026-03-06 21:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 21:56:17] Checking for apptainer binary...
[2026-03-06 21:56:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 21:56:17] Running /usr/bin/apptainer --version
[2026-03-06 21:56:17] apptainer version 1.4.1-1.el9
[2026-03-06 21:56:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 21:56:17] wns0038.triumf.lcg
[2026-03-06 21:56:17] apptainer works
[2026-03-06 21:56:17] Set ATHENA_PROC_NUMBER=12
[2026-03-06 21:56:17] Set ATHENA_CORE_NUMBER=12
[2026-03-06 21:56:17] Starting ATLAS job with PandaID=7044315133
[2026-03-06 21:56:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 21:59:51]  *** The last 200 lines of the pilot log: ***
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | could have reported an average CPU frequency of 2550 MHz (4 samples)
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | ..............................
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . Timing measurements:
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . get job = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . initial setup = 9 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . payload setup = 7 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . stage-in = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . payload execution = 20 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . stage-out = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . log creation = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | ..............................
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044315133/pilotlog.txt
[2026-03-06 21:59:52] 2026-03-07 05:59:19,921 | INFO     | monitor loop #56: job 0:7044315133 is in state 'failed'
[2026-03-06 21:59:52] 2026-03-07 05:59:19,921 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-06 21:59:52] 2026-03-07 05:59:20,017 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 21:59:52] - Log from pilotlog.txt -
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | found no stored workdir sizes
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | wrong length of table data, x=[1772863022.0], y=[1523.0] (must be same and length>=4)
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | could have reported an average CPU frequency of 2550 MHz (4 samples)
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | ..............................
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . Timing measurements:
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . get job = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . initial setup = 9 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . payload setup = 7 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . stage-in = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . payload execution = 20 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . stage-out = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . log creation = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | ..............................
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044315133/pilotlog.txt
[2026-03-06 21:59:52] 2026-03-07 05:59:19,921 | INFO     | monitor loop #56: job 0:7044315133 is in state 'failed'
[2026-03-06 21:59:52] 2026-03-07 05:59:19,921 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-06 21:59:52] 2026-03-07 05:59:20,017 | WARNING  | 
[2026-03-06 21:59:52] [begin log extracts]
[2026-03-06 21:59:52] - Log from pilotlog.txt -
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | found no stored workdir sizes
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | WARNING  | wrong length of table data, x=[1772863022.0], y=[1523.0] (must be same and length>=4)
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | could have reported an average CPU frequency of 2550 MHz (4 samples)
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | ..............................
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . Timing measurements:
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . get job = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . initial setup = 9 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,860 | INFO     | . payload setup = 7 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . stage-in = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . payload execution = 20 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . stage-out = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | . log creation = 0 s
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | ..............................
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:59:52] 2026-03-07 05:59:19,861 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7044315133/pilotlog.txt
[2026-03-06 21:59:52] 2026-03-07 05:59:19,921 | INFO     | monitor loop #56: job 0:7044315133 is in state 'failed'
[2026-03-06 21:59:52] 2026-03-07 05:59:19,921 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-06 21:59:52] [end log extracts]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,017 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 21:59:52] 2026-03-07 05:59:20,018 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 21:59:52] 2026-03-07 05:59:20,072 | INFO     | 
[2026-03-06 21:59:52] 2026-03-07 05:59:20,072 | INFO     | job summary report
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | --------------------------------------------------
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | PanDA job id: 7044315133
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | task id: 48958577
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 21:57:11,897 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | pilot state: failed 
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | transexitcode: 65
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | exeerrorcode: 65
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | exitcode: 65
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | cpuconsumptiontime: 13 s
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | nevents: 0
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | neventsw: 0
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | pid: 1388907
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | pgrp: 1388907
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | corecount: 12
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | event service: False
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | sizes: {0: 2295764, 11: 2295764, 31: 2319209, 32: 2319185, 33: 2323505, 36: 2323561, 152: 2323855}
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | --------------------------------------------------
[2026-03-06 21:59:52] 2026-03-07 05:59:20,073 | INFO     | 
[2026-03-06 21:59:52] 2026-03-07 05:59:20,074 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-06 21:59:52] 2026-03-07 05:59:20,094 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,094 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,094 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 21:59:52] 2026-03-07 05:59:20,095 | INFO     | job 7044315133 has completed (purged errors)
[2026-03-06 21:59:52] 2026-03-07 05:59:20,096 | INFO     | overall cleanup function is called
[2026-03-06 21:59:52] 2026-03-07 05:59:21,101 | INFO     | --- collectZombieJob: --- 10, [1388907]
[2026-03-06 21:59:52] 2026-03-07 05:59:21,101 | INFO     | zombie collector waiting for pid 1388907
[2026-03-06 21:59:52] 2026-03-07 05:59:21,101 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 21:59:52] 2026-03-07 05:59:21,101 | INFO     | collected zombie processes
[2026-03-06 21:59:52] 2026-03-07 05:59:21,101 | INFO     | will attempt to kill all subprocesses of pid=1388907
[2026-03-06 21:59:52] 2026-03-07 05:59:21,275 | INFO     | process IDs to be killed: [1388907] (in reverse order)
[2026-03-06 21:59:52] 2026-03-07 05:59:21,412 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 21:59:52] 2026-03-07 05:59:21,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 21:59:52] 2026-03-07 05:59:21,455 | INFO     | did not find any defunct processes belonging to 1388907
[2026-03-06 21:59:52] 2026-03-07 05:59:21,494 | INFO     | did not find any defunct processes belonging to 1388907
[2026-03-06 21:59:52] 2026-03-07 05:59:21,494 | INFO     | ready for new job
[2026-03-06 21:59:52] 2026-03-07 05:59:21,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 21:59:52] 2026-03-07 05:59:21,496 | INFO     | **************************************
[2026-03-06 21:59:52] 2026-03-07 05:59:21,496 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 21:59:52] 2026-03-07 05:59:21,496 | INFO     | **************************************
[2026-03-06 21:59:52] 2026-03-07 05:59:21,496 | INFO     | 
[2026-03-06 21:59:52] 2026-03-07 05:59:21,499 | INFO     | architecture information:
[2026-03-06 21:59:52] 2026-03-07 05:59:21,503 | INFO     | executing command: cat /etc/os-release
[2026-03-06 21:59:52] 2026-03-07 05:59:21,576 | INFO     | cat /etc/os-release:
[2026-03-06 21:59:52] NAME="CentOS Linux"
[2026-03-06 21:59:52] VERSION="7 (Core)"
[2026-03-06 21:59:52] ID="centos"
[2026-03-06 21:59:52] ID_LIKE="rhel fedora"
[2026-03-06 21:59:52] VERSION_ID="7"
[2026-03-06 21:59:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 21:59:52] ANSI_COLOR="0;31"
[2026-03-06 21:59:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 21:59:52] HOME_URL="https://www.centos.org/"
[2026-03-06 21:59:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 21:59:52] 
[2026-03-06 21:59:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 21:59:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 21:59:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 21:59:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 21:59:52] 
[2026-03-06 21:59:52] 2026-03-07 05:59:21,576 | INFO     | **************************************
[2026-03-06 21:59:52] 2026-03-07 05:59:22,080 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-06 21:59:52] 2026-03-07 05:59:22,129 | INFO     | sufficient remaining disk space (2071349690368 B)
[2026-03-06 21:59:52] 2026-03-07 05:59:22,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 21:59:52] 2026-03-07 05:59:22,130 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 21:59:52] 2026-03-07 05:59:22,130 | INFO     | update_server=False
[2026-03-06 21:59:52] 2026-03-07 05:59:22,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 21:59:52] 2026-03-07 05:59:22,130 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 21:59:52] 2026-03-07 05:59:22,348 | INFO     | all data control threads have been joined
[2026-03-06 21:59:52] 2026-03-07 05:59:22,426 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-06 21:59:52] 2026-03-07 05:59:22,426 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-06 21:59:52] 2026-03-07 05:59:22,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 21:59:52] 2026-03-07 05:59:22,426 | INFO     | will abort loop
[2026-03-06 21:59:52] 2026-03-07 05:59:22,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 21:59:52] 2026-03-07 05:59:23,140 | INFO     | [job] retrieve thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:23,354 | INFO     | [data] control thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:23,432 | INFO     | [job] job monitor thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:23,511 | INFO     | all payload control threads have been joined
[2026-03-06 21:59:52] 2026-03-07 05:59:23,585 | INFO     | all job control threads have been joined
[2026-03-06 21:59:52] 2026-03-07 05:59:23,632 | INFO     | [job] validate thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:23,803 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:23,976 | INFO     | [data] copytool_in thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:23,976 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:24,043 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:24,043 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:24,146 | INFO     | [data] copytool_out thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:24,324 | INFO     | [payload] failed_post thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:24,484 | INFO     | [payload] validate_post thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:24,517 | INFO     | [payload] control thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:24,590 | INFO     | [job] control thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:25,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 21:59:52] 2026-03-07 05:59:26,093 | INFO     | [job] queue monitor thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:26,817 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 21:59:52] 2026-03-07 05:59:36,663 | INFO     | [monitor] cgroup control has ended
[2026-03-06 21:59:52] 2026-03-07 05:59:37,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253899601728)>', '<ExcThread(monitor, started 140253214004992)>']
[2026-03-06 21:59:52] 2026-03-07 05:59:42,616 | INFO     | all workflow threads have been joined
[2026-03-06 21:59:52] 2026-03-07 05:59:42,617 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 21:59:52] 2026-03-07 05:59:42,617 | INFO     | traces error code: 0
[2026-03-06 21:59:52] 2026-03-07 05:59:42,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 21:59:52] 2026-03-07 05:59:51,725 | INFO     | PID=1375683 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 21:59:52] 2026-03-07 05:59:51,725 | INFO     | .. there are 28 such processes running
[2026-03-06 21:59:52] 2026-03-07 05:59:51,726 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 21:59:52] 2026-03-07 05:59:51,726 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 21:59:52] 2026-03-07 05:59:51,726 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 21:59:52] 2026-03-07 05:59:51,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 21:59:52] 2026-03-07 05:59:51,726 | INFO     | [monitor] control thread has ended
[2026-03-06 21:59:52] 2026-03-07 05:59:51,831 [wrapper] ==== pilot stdout END ====
[2026-03-06 21:59:52] 2026-03-07 05:59:51,833 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 21:59:52] 2026-03-07 05:59:51,835 [wrapper] pilotpid: 1375683
[2026-03-06 21:59:52] 2026-03-07 05:59:51,836 [wrapper] Pilot exit status: 0
[2026-03-06 21:59:52] 2026-03-07 05:59:51,845 [wrapper] pandaids: 7044315133
[2026-03-06 21:59:52] 2026-03-07 05:59:51,886 [wrapper] cleanup supervisor_pilot 1375692 1375684
[2026-03-06 21:59:52] 2026-03-07 05:59:51,888 [wrapper] Test setup, not cleaning
[2026-03-06 21:59:52] 2026-03-07 05:59:51,890 [wrapper] apfmon messages muted
[2026-03-06 21:59:52] 2026-03-07 05:59:51,892 [wrapper] ==== wrapper stdout END ====
[2026-03-06 21:59:52] 2026-03-07 05:59:51,893 [wrapper] ==== wrapper stderr END ====
[2026-03-06 21:59:52]  *** Error codes and diagnostics ***
[2026-03-06 21:59:52]     "exeErrorCode": 65,
[2026-03-06 21:59:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 21:59:52]     "pilotErrorCode": 1305,
[2026-03-06 21:59:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 21:59:52]  *** Listing of results directory ***
[2026-03-06 21:59:52] total 266640
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc    584627 Mar  6 17:09 pilot3.tar.gz
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc      5111 Mar  6 17:37 queuedata.json
[2026-03-06 21:59:52] -rwx------. 1 boinc boinc     36322 Mar  6 17:37 runpilot2-wrapper.sh
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc       100 Mar  6 21:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 21:59:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 21:56 run_atlas
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc       105 Mar  6 21:56 job.xml
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc      6594 Mar  6 21:56 init_data.xml
[2026-03-06 21:59:52] -rw-r--r--. 2 boinc boinc 268906596 Mar  6 21:56 EVNT.48958575._000071.pool.root.1
[2026-03-06 21:59:52] -rw-r--r--. 2 boinc boinc     15845 Mar  6 21:56 start_atlas.sh
[2026-03-06 21:59:52] drwxrwx--x. 2 boinc boinc      4096 Mar  6 21:56 shared
[2026-03-06 21:59:52] -rw-r--r--. 2 boinc boinc    597940 Mar  6 21:56 input.tar.gz
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc         0 Mar  6 21:56 boinc_lockfile
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc      2535 Mar  6 21:56 pandaJob.out
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc    999155 Mar  6 21:56 agis_schedconf.cvmfs.json
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc   1521291 Mar  6 21:56 agis_ddmendpoints.agis.ALL.json
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc       445 Mar  6 21:56 workernode_map.json
[2026-03-06 21:59:52] drwx------. 5 boinc boinc      4096 Mar  6 21:56 pilot3
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc       522 Mar  6 21:57 boinc_task_state.xml
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc       980 Mar  6 21:57 memory_monitor_summary.json
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc     20826 Mar  6 21:57 log.48958577._001820.job.log.tgz.1
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc      7036 Mar  6 21:59 heartbeat.json
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc      8192 Mar  6 21:59 boinc_mmap_file
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc        22 Mar  6 21:59 wrapper_checkpoint.txt
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc       823 Mar  6 21:59 pilotlog.txt
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc        95 Mar  6 21:59 pilot_heartbeat.json
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc     81891 Mar  6 21:59 log.48958577._001820.job.log.1
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc       188 Mar  6 21:59 output.list
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc       620 Mar  6 21:59 runtime_log
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc    122880 Mar  6 21:59 result.tar.gz
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc      8635 Mar  6 21:59 runtime_log.err
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc       644 Mar  6 21:59 pD1LDmKnvI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm92RLDmpTulon.diag
[2026-03-06 21:59:52] -rw-r--r--. 1 boinc boinc     21769 Mar  6 21:59 stderr.txt
[2026-03-06 21:59:52] No HITS result produced
[2026-03-06 21:59:52]  *** Contents of shared directory: ***
[2026-03-06 21:59:52] total 263328
[2026-03-06 21:59:52] -rw-r--r--. 2 boinc boinc 268906596 Mar  6 21:56 ATLAS.root_0
[2026-03-06 21:59:52] -rw-r--r--. 2 boinc boinc     15845 Mar  6 21:56 start_atlas.sh
[2026-03-06 21:59:52] -rw-r--r--. 2 boinc boinc    597940 Mar  6 21:56 input.tar.gz
[2026-03-06 21:59:52] -rw-------. 1 boinc boinc    122880 Mar  6 21:59 result.tar.gz
21:59:53 (1370098): run_atlas exited; CPU time 17.354680
21:59:53 (1370098): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN