Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:54:38 (2683444): wrapper (7.7.26015): starting
00:54:38 (2683444): wrapper: running run_atlas (--nthreads 4)
[2026-03-09 00:54:38] Arguments: --nthreads 4
[2026-03-09 00:54:38] Threads: 4
[2026-03-09 00:54:38] Checking for CVMFS
[2026-03-09 00:54:38] No cvmfs_config command found, will try listing directly
[2026-03-09 00:54:38] CVMFS is ok
[2026-03-09 00:54:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-09 00:54:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-09 00:54:38] Further information can be found at the LHC@home message board.
[2026-03-09 00:54:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-09 00:54:38] Checking for apptainer binary...
[2026-03-09 00:54:38] which: no apptainer in ((null))
[2026-03-09 00:54:38] apptainer is not installed, using version from CVMFS
[2026-03-09 00:54:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-09 00:54:38] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot180/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-09 00:54:38] apptainer works
[2026-03-09 00:54:38] Set ATHENA_PROC_NUMBER=4
[2026-03-09 00:54:38] Set ATHENA_CORE_NUMBER=4
[2026-03-09 00:54:38] Starting ATLAS job with PandaID=7043546643
[2026-03-09 00:54:38] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot180/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-09 02:42:06]  *** The last 200 lines of the pilot log: ***
[2026-03-09 02:42:06] 2026-03-09 01:41:09,796 | INFO     | job 7043546643 has finished - writing final server update
[2026-03-09 02:42:06] 2026-03-09 01:41:09,796 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19292/.job.ad'
[2026-03-09 02:42:06] 2026-03-09 01:41:09,796 | INFO     | total number of processed events: 400 (read)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,814 | INFO     | using path: /var/lib/boinc/var/slot180/slots/0/PanDA_Pilot-7043546643/memory_monitor_summary.json (trf name=prmon)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,814 | INFO     | extracted standard info from prmon json
[2026-03-09 02:42:06] 2026-03-09 01:41:09,815 | INFO     | extracted standard memory fields from prmon json
[2026-03-09 02:42:06] 2026-03-09 01:41:09,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-09 02:42:06] 2026-03-09 01:41:09,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-09 02:42:06] 2026-03-09 01:41:09,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-09 02:42:06] 2026-03-09 01:41:09,816 | INFO     | fitting pss+swap vs Time
[2026-03-09 02:42:06] 2026-03-09 01:41:09,816 | INFO     | sum of square deviations: 358927660.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | sum of deviations: 4017595236.999999
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | mean x: 1773017284.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | mean y: 2282503.8476190474
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | intersect: -19843682544.700256
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | chi2: 1.9370582097957552
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | sum of deviations: 10165633774.000002
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | mean x: 1773017131.5
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | mean y: 2300889.84
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | intersect: -58129315552.18153
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | chi2: 1.1155008817515621
[2026-03-09 02:42:06] 2026-03-09 01:41:09,817 | INFO     | current chi2=1.1155008817515621 (change=42.41262982648408 %)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | sum of deviations: 9555303276.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | mean x: 1773016979.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | mean y: 2298783.5368421054
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | intersect: -63729511455.444244
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | chi2: 1.1175664801991838
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | current chi2=1.1175664801991838 (change=-0.18517228282045425 %)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | right removable region: 94
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | sum of square deviations: 310052325.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | sum of deviations: -5822205817.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | mean x: 1773017436.5
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | mean y: 2312247.1
[2026-03-09 02:42:06] 2026-03-09 01:41:09,818 | INFO     | intersect: 33296281039.08609
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | chi2: 0.8553258540802976
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | current chi2=0.8553258540802976 (change=55.84408100103075 %)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | sum of square deviations: 265828240.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | sum of deviations: -5695299648.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | mean x: 1773017589.0
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | mean y: 2311793.0315789473
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | intersect: 37988744124.410324
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | chi2: 0.8564987057977891
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | current chi2=0.8564987057977891 (change=-0.13712337957474843 %)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | left removable region: 20
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | sum of square deviations: 125630262.5
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | sum of deviations: 236736455.49999997
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | mean x: 1773017558.5
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | mean y: 2333225.527027027
[2026-03-09 02:42:06] 2026-03-09 01:41:09,819 | INFO     | intersect: -3338723968.7023797
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | chi2: 2.3645374307732777e-05
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | current memory leak: 1.88 B/s (using 74 data points, chi2=0.00)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | could have reported an average CPU frequency of 3607 MHz (7 samples)
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | ..............................
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . Timing measurements:
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . get job = 0 s
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . initial setup = 5 s
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . payload setup = 5 s
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . stage-in = 0 s
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . payload execution = 6353 s
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . stage-out = 0 s
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | . log creation = 0 s
[2026-03-09 02:42:06] 2026-03-09 01:41:09,820 | INFO     | ..............................
[2026-03-09 02:42:06] 2026-03-09 01:41:10,288 | INFO     | 
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | job summary report
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | --------------------------------------------------
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | PanDA job id: 7043546643
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | task id: 48967011
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | errors: (none)
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | pilot state: finished 
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | transexitcode: 0
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | exeerrorcode: 0
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | exeerrordiag: 
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | exitcode: 0
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | exitmsg: OK
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | cpuconsumptiontime: 24559 s
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | nevents: 400
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | neventsw: 0
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | pid: 2694408
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | pgrp: 2694408
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | corecount: 4
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | event service: False
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | sizes: {0: 2280258, 11: 2280258, 6362: 2307157, 6364: 2316179, 6367: 2316235, 6368: 2316429}
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | --------------------------------------------------
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | 
[2026-03-09 02:42:06] 2026-03-09 01:41:10,289 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot180/slots/0
[2026-03-09 02:42:06] 2026-03-09 01:41:10,308 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | job 7043546643 has completed (purged errors)
[2026-03-09 02:42:06] 2026-03-09 01:41:10,309 | INFO     | overall cleanup function is called
[2026-03-09 02:42:06] 2026-03-09 01:41:11,317 | INFO     | --- collectZombieJob: --- 10, [2694408]
[2026-03-09 02:42:06] 2026-03-09 01:41:11,317 | INFO     | zombie collector waiting for pid 2694408
[2026-03-09 02:42:06] 2026-03-09 01:41:11,317 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-09 02:42:06] 2026-03-09 01:41:11,317 | INFO     | collected zombie processes
[2026-03-09 02:42:06] 2026-03-09 01:41:11,317 | INFO     | will attempt to kill all subprocesses of pid=2694408
[2026-03-09 02:42:06] 2026-03-09 01:41:11,772 | INFO     | process IDs to be killed: [2694408] (in reverse order)
[2026-03-09 02:42:06] 2026-03-09 01:41:11,991 | WARNING  | found no corresponding commands to process id(s)
[2026-03-09 02:42:06] 2026-03-09 01:41:11,991 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-09 02:42:06] 2026-03-09 01:41:12,021 | INFO     | did not find any defunct processes belonging to 2694408
[2026-03-09 02:42:06] 2026-03-09 01:41:12,050 | INFO     | did not find any defunct processes belonging to 2694408
[2026-03-09 02:42:06] 2026-03-09 01:41:12,050 | INFO     | ready for new job
[2026-03-09 02:42:06] 2026-03-09 01:41:12,050 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-09 02:42:06] 2026-03-09 01:41:12,051 | INFO     | **************************************
[2026-03-09 02:42:06] 2026-03-09 01:41:12,052 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-09 02:42:06] 2026-03-09 01:41:12,052 | INFO     | **************************************
[2026-03-09 02:42:06] 2026-03-09 01:41:12,052 | INFO     | 
[2026-03-09 02:42:06] 2026-03-09 01:41:12,058 | INFO     | architecture information:
[2026-03-09 02:42:06] 2026-03-09 01:41:12,058 | INFO     | executing command: cat /etc/os-release
[2026-03-09 02:42:06] 2026-03-09 01:41:12,071 | INFO     | cat /etc/os-release:
[2026-03-09 02:42:06] NAME="CentOS Linux"
[2026-03-09 02:42:06] VERSION="7 (Core)"
[2026-03-09 02:42:06] ID="centos"
[2026-03-09 02:42:06] ID_LIKE="rhel fedora"
[2026-03-09 02:42:06] VERSION_ID="7"
[2026-03-09 02:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-09 02:42:06] ANSI_COLOR="0;31"
[2026-03-09 02:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-09 02:42:06] HOME_URL="https://www.centos.org/"
[2026-03-09 02:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-09 02:42:06] 
[2026-03-09 02:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-09 02:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-09 02:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-09 02:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-09 02:42:06] 
[2026-03-09 02:42:06] 2026-03-09 01:41:12,072 | INFO     | **************************************
[2026-03-09 02:42:06] 2026-03-09 01:41:12,574 | INFO     | executing command: df -mP /var/lib/boinc/var/slot180/slots/0
[2026-03-09 02:42:06] 2026-03-09 01:41:12,589 | INFO     | sufficient remaining disk space (20659044352 B)
[2026-03-09 02:42:06] 2026-03-09 01:41:12,589 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-09 02:42:06] 2026-03-09 01:41:12,590 | INFO     | current server update state: UPDATING_FINAL
[2026-03-09 02:42:06] 2026-03-09 01:41:12,590 | INFO     | update_server=False
[2026-03-09 02:42:06] 2026-03-09 01:41:12,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-09 02:42:06] 2026-03-09 01:41:12,680 | INFO     | all job control threads have been joined
[2026-03-09 02:42:06] 2026-03-09 01:41:13,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:42:06] 2026-03-09 01:41:13,248 | INFO     | aborting loop
[2026-03-09 02:42:06] 2026-03-09 01:41:13,594 | INFO     | [job] retrieve thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:13,600 | INFO     | all data control threads have been joined
[2026-03-09 02:42:06] 2026-03-09 01:41:13,685 | INFO     | [job] control thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:13,735 | INFO     | [payload] failed_post thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:13,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-09 02:42:06] 2026-03-09 01:41:14,085 | INFO     | all payload control threads have been joined
[2026-03-09 02:42:06] 2026-03-09 01:41:14,253 | INFO     | [job] job monitor thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:14,344 | INFO     | [job] validate thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:14,352 | INFO     | [job] create_data_payload thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:14,388 | INFO     | [payload] execute_payloads thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:14,486 | INFO     | [payload] validate_pre thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:14,605 | INFO     | [data] control thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:14,710 | INFO     | [data] copytool_in thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:14,797 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-09 02:42:06] 2026-03-09 01:41:14,878 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-09 02:42:06] 2026-03-09 01:41:15,031 | INFO     | [payload] validate_post thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:15,090 | INFO     | [payload] control thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:15,883 | INFO     | [job] queue monitor thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:15,919 | INFO     | [data] copytool_out thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:18,802 | INFO     | [data] queue_monitor thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:22,804 | INFO     | job.realtimelogging is not enabled
[2026-03-09 02:42:06] 2026-03-09 01:41:23,809 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-09 02:42:06] 2026-03-09 01:41:42,186 | INFO     | PID=2687979 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-09 02:42:06] 2026-03-09 01:41:42,186 | INFO     | .. there are 46 such processes running
[2026-03-09 02:42:06] 2026-03-09 01:41:42,186 | INFO     | found 0 job(s) in 20 queues
[2026-03-09 02:42:06] 2026-03-09 01:41:42,186 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-09 02:42:06] 2026-03-09 01:41:42,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-09 02:42:06] 2026-03-09 01:42:01,047 | INFO     | [monitor] cgroup control has ended
[2026-03-09 02:42:06] 2026-03-09 01:42:01,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22819237508928)>', '<ExcThread(monitor, started 22818998990592)>']
[2026-03-09 02:42:06] 2026-03-09 01:42:01,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-09 02:42:06] 2026-03-09 01:42:01,278 | INFO     | [monitor] control thread has ended
[2026-03-09 02:42:06] 2026-03-09 01:42:06,218 | INFO     | all workflow threads have been joined
[2026-03-09 02:42:06] 2026-03-09 01:42:06,218 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-09 02:42:06] 2026-03-09 01:42:06,218 | INFO     | traces error code: 0
[2026-03-09 02:42:06] 2026-03-09 01:42:06,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-09 02:42:06] 2026-03-09 01:42:06,395 [wrapper] ==== pilot stdout END ====
[2026-03-09 02:42:06] 2026-03-09 01:42:06,398 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-09 02:42:06] 2026-03-09 01:42:06,400 [wrapper] pilotpid: 2687979
[2026-03-09 02:42:06] 2026-03-09 01:42:06,402 [wrapper] Pilot exit status: 0
[2026-03-09 02:42:06] 2026-03-09 01:42:06,411 [wrapper] pandaids: 7043546643
[2026-03-09 02:42:06] 2026-03-09 01:42:06,528 [wrapper] cleanup supervisor_pilot 3605953 2687980
[2026-03-09 02:42:06] 2026-03-09 01:42:06,531 [wrapper] Test setup, not cleaning
[2026-03-09 02:42:06] 2026-03-09 01:42:06,533 [wrapper] apfmon messages muted
[2026-03-09 02:42:06] 2026-03-09 01:42:06,534 [wrapper] ==== wrapper stdout END ====
[2026-03-09 02:42:06] 2026-03-09 01:42:06,536 [wrapper] ==== wrapper stderr END ====
[2026-03-09 02:42:06]  *** Error codes and diagnostics ***
[2026-03-09 02:42:06]     "exeErrorCode": 0,
[2026-03-09 02:42:06]     "exeErrorDiag": "",
[2026-03-09 02:42:06]     "pilotErrorCode": 0,
[2026-03-09 02:42:06]     "pilotErrorDiag": "",
[2026-03-09 02:42:06]  *** Listing of results directory ***
[2026-03-09 02:42:06] total 419732
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc      5111 Mar  6 21:02 queuedata.json
[2026-03-09 02:42:06] -rwx------. 1 boinc boinc     36322 Mar  6 21:02 runpilot2-wrapper.sh
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc    584627 Mar  6 21:02 pilot3.tar.gz
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc       100 Mar  9 00:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-09 02:42:06] -rwxr-xr-x. 1 boinc boinc      7986 Mar  9 00:54 run_atlas
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc       105 Mar  9 00:54 job.xml
[2026-03-09 02:42:06] -rw-r--r--. 2 boinc boinc     15845 Mar  9 00:54 start_atlas.sh
[2026-03-09 02:42:06] drwxrwx--x. 2 boinc boinc      4096 Mar  9 00:54 shared
[2026-03-09 02:42:06] -rw-r--r--. 2 boinc boinc    597939 Mar  9 00:54 input.tar.gz
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc      6707 Mar  9 00:54 init_data.xml
[2026-03-09 02:42:06] -rw-r--r--. 2 boinc boinc 217717460 Mar  9 00:54 EVNT.48967008._000059.pool.root.1
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc         0 Mar  9 00:54 boinc_lockfile
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc      2570 Mar  9 00:54 pandaJob.out
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc    999108 Mar  9 00:54 agis_schedconf.cvmfs.json
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc   1511578 Mar  9 00:54 agis_ddmendpoints.agis.ALL.json
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc       445 Mar  9 00:54 workernode_map.json
[2026-03-09 02:42:06] drwx------. 5 boinc boinc      4096 Mar  9 00:54 pilot3
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc 205755199 Mar  9 02:40 HITS.48967011._001462.pool.root.1
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc      1030 Mar  9 02:41 memory_monitor_summary.json
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc       530 Mar  9 02:41 boinc_task_state.xml
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc        95 Mar  9 02:41 pilot_heartbeat.json
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc    281885 Mar  9 02:41 log.48967011._001462.job.log.tgz.1
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc      6348 Mar  9 02:41 heartbeat.json
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc      8192 Mar  9 02:42 boinc_mmap_file
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc        27 Mar  9 02:42 wrapper_checkpoint.txt
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc      4902 Mar  9 02:42 pilotlog.txt
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc    918565 Mar  9 02:42 log.48967011._001462.job.log.1
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc       357 Mar  9 02:42 output.list
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc       620 Mar  9 02:42 runtime_log
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc   1218560 Mar  9 02:42 result.tar.gz
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc      9221 Mar  9 02:42 runtime_log.err
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc       663 Mar  9 02:42 7HSLDmKYqI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyYTLDmd62yen.diag
[2026-03-09 02:42:06] -rw-r--r--. 1 boinc boinc     20859 Mar  9 02:42 stderr.txt
[2026-03-09 02:42:06] HITS file was successfully produced:
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc 205755199 Mar  9 02:40 shared/HITS.pool.root.1
[2026-03-09 02:42:06]  *** Contents of shared directory: ***
[2026-03-09 02:42:06] total 415352
[2026-03-09 02:42:06] -rw-r--r--. 2 boinc boinc     15845 Mar  9 00:54 start_atlas.sh
[2026-03-09 02:42:06] -rw-r--r--. 2 boinc boinc    597939 Mar  9 00:54 input.tar.gz
[2026-03-09 02:42:06] -rw-r--r--. 2 boinc boinc 217717460 Mar  9 00:54 ATLAS.root_0
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc 205755199 Mar  9 02:40 HITS.pool.root.1
[2026-03-09 02:42:06] -rw-------. 1 boinc boinc   1218560 Mar  9 02:42 result.tar.gz
02:42:07 (2683444): run_atlas exited; CPU time 24852.614023
02:42:07 (2683444): called boinc_finish(0)

</stderr_txt>
]]>

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