Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:26:14 (2134336): wrapper (7.7.26015): starting
21:26:14 (2134336): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 21:26:14] Arguments: --nthreads 12
[2026-03-06 21:26:14] Threads: 12
[2026-03-06 21:26:14] Checking for CVMFS
[2026-03-06 21:26:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 21:26:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 21:26:15] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 21:26:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 21:26:16] 2.11.5.0 3459277 138209 142944 156990 2 194 33069743 45568000 20736 130560 0 1243247568 99.816 725272980 20081 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-03-06 21:26:16] CVMFS is ok
[2026-03-06 21:26:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 21:26:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 21:26:16] Further information can be found at the LHC@home message board.
[2026-03-06 21:26:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 21:26:16] Checking for apptainer binary...
[2026-03-06 21:26:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 21:26:16] Running /usr/bin/apptainer --version
[2026-03-06 21:26:16] apptainer version 1.4.1-1.el9
[2026-03-06 21:26:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 21:26:16] wns0066.triumf.lcg
[2026-03-06 21:26:16] apptainer works
[2026-03-06 21:26:16] Set ATHENA_PROC_NUMBER=12
[2026-03-06 21:26:16] Set ATHENA_CORE_NUMBER=12
[2026-03-06 21:26:16] Starting ATLAS job with PandaID=7043947476
[2026-03-06 21:26:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 21:30:03]  *** The last 200 lines of the pilot log: ***
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | found no stored workdir sizes
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | wrong length of table data, x=[1772861232.0], y=[1403.0] (must be same and length>=4)
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | INFO     | could have reported an average CPU frequency of 2499 MHz (4 samples)
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | ..............................
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . Timing measurements:
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . get job = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . initial setup = 9 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . payload setup = 11 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . stage-in = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . payload execution = 24 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . stage-out = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . log creation = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | ..............................
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043947476/pilotlog.txt
[2026-03-06 21:30:03] 2026-03-07 05:29:30,976 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 21:30:03] - Log from pilotlog.txt -
[2026-03-06 21:30:03] 2026-03-07 05:29:30,958 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 21:30:03] 2026-03-07 05:29:30,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | found no stored workdir sizes
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | wrong length of table data, x=[1772861232.0], y=[1403.0] (must be same and length>=4)
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | INFO     | could have reported an average CPU frequency of 2499 MHz (4 samples)
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | ..............................
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . Timing measurements:
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . get job = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . initial setup = 9 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . payload setup = 11 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . stage-in = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . payload execution = 24 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . stage-out = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . log creation = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | ..............................
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043947476/pilotlog.txt
[2026-03-06 21:30:03] 2026-03-07 05:29:30,976 | WARNING  | 
[2026-03-06 21:30:03] [begin log extracts]
[2026-03-06 21:30:03] - Log from pilotlog.txt -
[2026-03-06 21:30:03] 2026-03-07 05:29:30,958 | INFO     | extracted standard memory fields from prmon json
[2026-03-06 21:30:03] 2026-03-07 05:29:30,958 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | found no stored workdir sizes
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | WARNING  | wrong length of table data, x=[1772861232.0], y=[1403.0] (must be same and length>=4)
[2026-03-06 21:30:03] 2026-03-07 05:29:30,959 | INFO     | could have reported an average CPU frequency of 2499 MHz (4 samples)
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | ..............................
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . Timing measurements:
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . get job = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . initial setup = 9 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . payload setup = 11 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . stage-in = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . payload execution = 24 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . stage-out = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | . log creation = 0 s
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | ..............................
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 21:30:03] 2026-03-07 05:29:30,960 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043947476/pilotlog.txt
[2026-03-06 21:30:03] [end log extracts]
[2026-03-06 21:30:03] 2026-03-07 05:29:30,988 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 21:30:03] 2026-03-07 05:29:30,989 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 21:30:03] 2026-03-07 05:29:31,099 | INFO     | 
[2026-03-06 21:30:03] 2026-03-07 05:29:31,099 | INFO     | job summary report
[2026-03-06 21:30:03] 2026-03-07 05:29:31,099 | INFO     | --------------------------------------------------
[2026-03-06 21:30:03] 2026-03-07 05:29:31,099 | INFO     | PanDA job id: 7043947476
[2026-03-06 21:30:03] 2026-03-07 05:29:31,099 | INFO     | task id: 48958627
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 21:27:27,486 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | pilot state: failed 
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | transexitcode: 65
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | exeerrorcode: 65
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | exitcode: 65
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | cpuconsumptiontime: 13 s
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | nevents: 0
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | neventsw: 0
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | pid: 2142597
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | pgrp: 2142597
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | corecount: 12
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | event service: False
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | sizes: {0: 2295315, 1: 2295776, 12: 2295776, 39: 2323290, 40: 2323290, 155: 2323456}
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | --------------------------------------------------
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | 
[2026-03-06 21:30:03] 2026-03-07 05:29:31,100 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-06 21:30:03] 2026-03-07 05:29:31,283 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,283 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,283 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 21:30:03] 2026-03-07 05:29:31,284 | INFO     | job 7043947476 has completed (purged errors)
[2026-03-06 21:30:03] 2026-03-07 05:29:31,285 | INFO     | overall cleanup function is called
[2026-03-06 21:30:03] 2026-03-07 05:29:32,291 | INFO     | --- collectZombieJob: --- 10, [2142597]
[2026-03-06 21:30:03] 2026-03-07 05:29:32,291 | INFO     | zombie collector waiting for pid 2142597
[2026-03-06 21:30:03] 2026-03-07 05:29:32,291 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 21:30:03] 2026-03-07 05:29:32,291 | INFO     | collected zombie processes
[2026-03-06 21:30:03] 2026-03-07 05:29:32,291 | INFO     | will attempt to kill all subprocesses of pid=2142597
[2026-03-06 21:30:03] 2026-03-07 05:29:32,637 | INFO     | process IDs to be killed: [2142597] (in reverse order)
[2026-03-06 21:30:03] 2026-03-07 05:29:32,772 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 21:30:03] 2026-03-07 05:29:32,772 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 21:30:03] 2026-03-07 05:29:32,788 | INFO     | did not find any defunct processes belonging to 2142597
[2026-03-06 21:30:03] 2026-03-07 05:29:32,795 | INFO     | did not find any defunct processes belonging to 2142597
[2026-03-06 21:30:03] 2026-03-07 05:29:32,796 | INFO     | ready for new job
[2026-03-06 21:30:03] 2026-03-07 05:29:32,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 21:30:03] 2026-03-07 05:29:32,797 | INFO     | **************************************
[2026-03-06 21:30:03] 2026-03-07 05:29:32,797 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 21:30:03] 2026-03-07 05:29:32,797 | INFO     | **************************************
[2026-03-06 21:30:03] 2026-03-07 05:29:32,797 | INFO     | 
[2026-03-06 21:30:03] 2026-03-07 05:29:32,801 | INFO     | architecture information:
[2026-03-06 21:30:03] 2026-03-07 05:29:32,805 | INFO     | executing command: cat /etc/os-release
[2026-03-06 21:30:03] 2026-03-07 05:29:32,854 | INFO     | cat /etc/os-release:
[2026-03-06 21:30:03] NAME="CentOS Linux"
[2026-03-06 21:30:03] VERSION="7 (Core)"
[2026-03-06 21:30:03] ID="centos"
[2026-03-06 21:30:03] ID_LIKE="rhel fedora"
[2026-03-06 21:30:03] VERSION_ID="7"
[2026-03-06 21:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 21:30:03] ANSI_COLOR="0;31"
[2026-03-06 21:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 21:30:03] HOME_URL="https://www.centos.org/"
[2026-03-06 21:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 21:30:03] 
[2026-03-06 21:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 21:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 21:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 21:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 21:30:03] 
[2026-03-06 21:30:03] 2026-03-07 05:29:32,855 | INFO     | **************************************
[2026-03-06 21:30:03] 2026-03-07 05:29:33,365 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-06 21:30:03] 2026-03-07 05:29:33,410 | INFO     | sufficient remaining disk space (2079152144384 B)
[2026-03-06 21:30:03] 2026-03-07 05:29:33,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 21:30:03] 2026-03-07 05:29:33,410 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 21:30:03] 2026-03-07 05:29:33,410 | INFO     | update_server=False
[2026-03-06 21:30:03] 2026-03-07 05:29:33,410 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 21:30:03] 2026-03-07 05:29:33,410 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 21:30:03] 2026-03-07 05:29:33,410 | INFO     | aborting loop
[2026-03-06 21:30:03] 2026-03-07 05:29:33,858 | INFO     | all job control threads have been joined
[2026-03-06 21:30:03] 2026-03-07 05:29:33,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 21:30:03] 2026-03-07 05:29:34,415 | INFO     | [job] retrieve thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:34,415 | INFO     | [job] job monitor thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:34,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 21:30:03] 2026-03-07 05:29:34,451 | INFO     | all data control threads have been joined
[2026-03-06 21:30:03] 2026-03-07 05:29:34,739 | INFO     | all payload control threads have been joined
[2026-03-06 21:30:03] 2026-03-07 05:29:34,864 | INFO     | [job] control thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,008 | INFO     | [payload] failed_post thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,032 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,047 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,135 | INFO     | [data] copytool_in thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,219 | INFO     | [job] validate thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,310 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,456 | INFO     | [data] control thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,554 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,745 | INFO     | [payload] control thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,785 | INFO     | [payload] validate_post thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:35,866 | INFO     | [data] copytool_out thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:36,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 21:30:03] 2026-03-07 05:29:37,122 | INFO     | [job] queue monitor thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:38,435 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 21:30:03] 2026-03-07 05:29:43,011 | INFO     | [monitor] cgroup control has ended
[2026-03-06 21:30:03] 2026-03-07 05:29:44,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979294193472)>', '<ExcThread(monitor, started 139978596140800)>']
[2026-03-06 21:30:03] 2026-03-07 05:29:49,516 | INFO     | all workflow threads have been joined
[2026-03-06 21:30:03] 2026-03-07 05:29:49,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 21:30:03] 2026-03-07 05:29:49,516 | INFO     | traces error code: 0
[2026-03-06 21:30:03] 2026-03-07 05:29:49,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 21:30:03] 2026-03-07 05:30:02,862 | INFO     | PID=2138018 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-06 21:30:03] 2026-03-07 05:30:02,862 | INFO     | .. there are 28 such processes running
[2026-03-06 21:30:03] 2026-03-07 05:30:02,863 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 21:30:03] 2026-03-07 05:30:02,863 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 21:30:03] 2026-03-07 05:30:02,863 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 21:30:03] 2026-03-07 05:30:02,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 21:30:03] 2026-03-07 05:30:02,863 | CRITICAL | thread 'MainThread' is not alive
[2026-03-06 21:30:03] 2026-03-07 05:30:02,863 | INFO     | [monitor] control thread has ended
[2026-03-06 21:30:03] 2026-03-07 05:30:03,013 [wrapper] ==== pilot stdout END ====
[2026-03-06 21:30:03] 2026-03-07 05:30:03,015 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 21:30:03] 2026-03-07 05:30:03,017 [wrapper] pilotpid: 2138018
[2026-03-06 21:30:03] 2026-03-07 05:30:03,018 [wrapper] Pilot exit status: 0
[2026-03-06 21:30:03] 2026-03-07 05:30:03,026 [wrapper] pandaids: 7043947476
[2026-03-06 21:30:03] 2026-03-07 05:30:03,069 [wrapper] cleanup supervisor_pilot 2138024 2138019
[2026-03-06 21:30:03] 2026-03-07 05:30:03,071 [wrapper] Test setup, not cleaning
[2026-03-06 21:30:03] 2026-03-07 05:30:03,073 [wrapper] apfmon messages muted
[2026-03-06 21:30:03] 2026-03-07 05:30:03,074 [wrapper] ==== wrapper stdout END ====
[2026-03-06 21:30:03] 2026-03-07 05:30:03,076 [wrapper] ==== wrapper stderr END ====
[2026-03-06 21:30:03]  *** Error codes and diagnostics ***
[2026-03-06 21:30:03]     "exeErrorCode": 65,
[2026-03-06 21:30:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 21:30:03]     "pilotErrorCode": 1305,
[2026-03-06 21:30:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 21:30:03]  *** Listing of results directory ***
[2026-03-06 21:30:03] total 270688
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc    584627 Mar  6 17:09 pilot3.tar.gz
[2026-03-06 21:30:03] -rwx------. 1 boinc boinc     36322 Mar  6 17:12 runpilot2-wrapper.sh
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc      5111 Mar  6 17:13 queuedata.json
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc       100 Mar  6 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 21:30:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 21:26 run_atlas
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc       105 Mar  6 21:26 job.xml
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc      6594 Mar  6 21:26 init_data.xml
[2026-03-06 21:30:03] -rw-r--r--. 2 boinc boinc 273053723 Mar  6 21:26 EVNT.48958625._000186.pool.root.1
[2026-03-06 21:30:03] -rw-r--r--. 2 boinc boinc     15845 Mar  6 21:26 start_atlas.sh
[2026-03-06 21:30:03] drwxrwx--x. 2 boinc boinc      4096 Mar  6 21:26 shared
[2026-03-06 21:30:03] -rw-r--r--. 2 boinc boinc    597940 Mar  6 21:26 input.tar.gz
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc         0 Mar  6 21:26 boinc_lockfile
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc      2521 Mar  6 21:26 pandaJob.out
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc    999155 Mar  6 21:26 agis_schedconf.cvmfs.json
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc   1521291 Mar  6 21:26 agis_ddmendpoints.agis.ALL.json
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc       444 Mar  6 21:26 workernode_map.json
[2026-03-06 21:30:03] drwx------. 5 boinc boinc      4096 Mar  6 21:26 pilot3
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc       522 Mar  6 21:27 boinc_task_state.xml
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc       946 Mar  6 21:27 memory_monitor_summary.json
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc     20857 Mar  6 21:27 log.48958627._004794.job.log.tgz.1
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc      7020 Mar  6 21:29 heartbeat.json
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc      8192 Mar  6 21:30 boinc_mmap_file
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc        22 Mar  6 21:30 wrapper_checkpoint.txt
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc        95 Mar  6 21:30 pilot_heartbeat.json
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc       893 Mar  6 21:30 pilotlog.txt
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc     81130 Mar  6 21:30 log.48958627._004794.job.log.1
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc       188 Mar  6 21:30 output.list
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc       620 Mar  6 21:30 runtime_log
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc    122880 Mar  6 21:30 result.tar.gz
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc      8635 Mar  6 21:30 runtime_log.err
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc       643 Mar  6 21:30 c4CNDmfOvI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYyRLDmN6xsnm.diag
[2026-03-06 21:30:03] -rw-r--r--. 1 boinc boinc     21616 Mar  6 21:30 stderr.txt
[2026-03-06 21:30:03] No HITS result produced
[2026-03-06 21:30:03]  *** Contents of shared directory: ***
[2026-03-06 21:30:03] total 267376
[2026-03-06 21:30:03] -rw-r--r--. 2 boinc boinc 273053723 Mar  6 21:26 ATLAS.root_0
[2026-03-06 21:30:03] -rw-r--r--. 2 boinc boinc     15845 Mar  6 21:26 start_atlas.sh
[2026-03-06 21:30:03] -rw-r--r--. 2 boinc boinc    597940 Mar  6 21:26 input.tar.gz
[2026-03-06 21:30:03] -rw-------. 1 boinc boinc    122880 Mar  6 21:30 result.tar.gz
21:30:04 (2134336): run_atlas exited; CPU time 17.652480
21:30:04 (2134336): called boinc_finish(0)

</stderr_txt>
]]>

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