Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-08 22:04:58 (21616): vboxwrapper version 26210
2026-03-08 22:04:58 (21616): BOINC client version: 8.2.8
2026-03-08 22:04:59 (21616): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2026-03-08 22:04:59 (21616): Successfully copied 'init_data.xml' to the shared directory.
2026-03-08 22:05:00 (21616): Create VM. (boinc_f3b5f072b10c2e53, slot#3)
2026-03-08 22:05:01 (21616): Setting Memory Size for VM. (4800MB)
2026-03-08 22:05:03 (21616): Setting CPU Count for VM. (8)
2026-03-08 22:05:03 (21616): Setting Chipset Options for VM.
2026-03-08 22:05:04 (21616): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-08 22:05:04 (21616): Setting Boot Options for VM.
2026-03-08 22:05:05 (21616): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-08 22:05:05 (21616): Enabling VM Network Access.
2026-03-08 22:05:06 (21616): Disabling USB Support for VM.
2026-03-08 22:05:06 (21616): Disabling COM Port Support for VM.
2026-03-08 22:05:06 (21616): Disabling LPT Port Support for VM.
2026-03-08 22:05:07 (21616): Disabling Audio Support for VM.
2026-03-08 22:05:07 (21616): Disabling Clipboard Support for VM.
2026-03-08 22:05:07 (21616): Disabling Drag and Drop Support for VM.
2026-03-08 22:05:07 (21616): Adding storage controller(s) to VM.
2026-03-08 22:05:08 (21616): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-08 22:05:08 (21616): Adding VirtualBox Guest Additions to VM.
2026-03-08 22:05:08 (21616): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-08 22:05:09 (21616): forwarding host port 61310 to guest port 80
2026-03-08 22:05:09 (21616): Enabling remote desktop for VM.
2026-03-08 22:05:09 (21616): Required extension pack not installed, remote desktop not enabled.
2026-03-08 22:05:09 (21616): Enabling shared directory for VM.
2026-03-08 22:05:10 (21616): Starting VM using VBoxManage interface. (boinc_f3b5f072b10c2e53, slot#3)
2026-03-08 22:05:14 (21616): Successfully started VM. (PID = '20076')
2026-03-08 22:05:14 (21616): Reporting VM Process ID to BOINC.
2026-03-08 22:05:14 (21616): Guest Log: BIOS: VirtualBox 7.2.0
2026-03-08 22:05:14 (21616): Guest Log: CPUID EDX: 0x178bfbff
2026-03-08 22:05:14 (21616): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-08 22:05:14 (21616): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-08 22:05:14 (21616): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-08 22:05:14 (21616): Detected: Web Application Enabled (http://localhost:61310)
2026-03-08 22:05:14 (21616): Preference change detected
2026-03-08 22:05:14 (21616): Setting CPU throttle for VM. (50%)
2026-03-08 22:05:14 (21616): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-08 22:05:16 (21616): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-08 22:05:16 (21616): Guest Log: BIOS: Booting from Hard Disk...
2026-03-08 22:05:20 (21616): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-08 22:05:20 (21616): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-08 22:05:20 (21616): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-08 22:05:40 (21616): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-08 22:05:40 (21616): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-08 22:07:18 (21616): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000345 main     Log opened 2026-03-08T22:07:19.784432000Z
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000418 main     OS Product: Linux
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000431 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000440 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000450 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000450 main     Process ID: 1416
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000450 main     Package type: LINUX_64BITS_GENERIC
2026-03-08 22:07:18 (21616): Guest Log: 00:00:00.000843 main     5.2.32 r132073 started. Verbose level = 0
2026-03-08 22:07:19 (21616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-08 22:07:19 (21616): Guest Log: [INFO] Mounting shared directory
2026-03-08 22:07:19 (21616): Guest Log: [INFO] Checking for init_data.xml
2026-03-08 22:07:25 (21616): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-08 22:07:25 (21616): Guest Log: [INFO] Detected branch: prod
2026-03-08 22:07:25 (21616): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-08 22:07:25 (21616): Guest Log: Copying input files
2026-03-08 22:07:28 (21616): Guest Log: 00:00:10.006020 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 408 083 377 000ns (GuestNow=1 773 022 047 869 208 000 ns GuestLast=1 773 007 639 785 831 000 ns fSetTimeLastLoop=true )
2026-03-08 22:10:13 (21616): Guest Log: Copied input files into RunAtlas.
2026-03-08 22:10:13 (21616): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-08 22:10:13 (21616): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-08 22:10:13 (21616): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-08 22:10:13 (21616): Guest Log: Further information can be found at the LHC@home message board.
2026-03-08 22:10:28 (21616): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-08 22:10:29 (21616): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-08 22:10:29 (21616): Guest Log: 2.6.3.0 1697 3 30152 157060 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-03-08 22:10:43 (21616): Guest Log: copied the webapp to /var/www
2026-03-08 22:10:43 (21616): Guest Log: ATHENA_PROC_NUMBER=8
2026-03-08 22:10:43 (21616): Guest Log: ATHENA_CORE_NUMBER=8
2026-03-08 22:10:45 (21616): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-08 22:10:45 (21616): Guest Log:  *** Starting ATLAS job. (PandaID=7043442116 taskID=48996069) ***
2026-03-08 22:55:30 (21616): Guest Log:  *** Job finished ***
2026-03-08 22:55:30 (21616): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:55:42,209 | INFO     | [data] copytool_out thread has finished
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:55:42,932 | INFO     | [data] queue_monitor thread has finished
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:24,942 | INFO     | [monitor] cgroup control has ended
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:26,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140137544738624)>', '<ExcThread(monitor, started 140137082099456)>']
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:26,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:26,613 | INFO     | [monitor] control thread has ended
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,572 | INFO     | all workflow threads have been joined
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,572 | INFO     | end of generic workflow (traces error code: 0)
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,572 | INFO     | traces error code: 0
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,851 [wrapper] ==== pilot stdout END ====
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,854 [wrapper] ==== wrapper stdout RESUME ====
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,856 [wrapper] pilotpid: 6197
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,858 [wrapper] Pilot exit status: 0
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,970 [wrapper] pandaids: 7043442116
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,988 [wrapper] cleanup supervisor_pilot 15720 6198
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,991 [wrapper] Test setup, not cleaning
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,993 [wrapper] apfmon messages muted
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,995 [wrapper] ==== wrapper stdout END ====
2026-03-08 22:55:30 (21616): Guest Log: 2026-03-09 02:56:31,997 [wrapper] ==== wrapper stderr END ====
2026-03-08 22:55:30 (21616): Guest Log:  *** Error codes and diagnostics ***
2026-03-08 22:55:30 (21616): Guest Log:     "exeErrorCode": 0,
2026-03-08 22:55:30 (21616): Guest Log:     "exeErrorDiag": "",
2026-03-08 22:55:30 (21616): Guest Log:     "pilotErrorCode": 1305,
2026-03-08 22:55:30 (21616): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"",
2026-03-08 22:55:30 (21616): Guest Log:  *** Listing of results directory ***
2026-03-08 22:55:30 (21616): Guest Log: total 5172
2026-03-08 22:55:30 (21616): Guest Log: -rw-r--r--. 1 atlas atlas  584627 Mar  6 18:15 pilot3.tar.gz
2026-03-08 22:55:30 (21616): Guest Log: -rwx------. 1 atlas atlas   36322 Mar  6 18:56 runpilot2-wrapper.sh
2026-03-08 22:55:30 (21616): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Mar  6 18:57 queuedata.json
2026-03-08 22:55:30 (21616): Guest Log: -rwxr-xr-x. 1 atlas atlas  597938 Mar  9 02:07 input.tar.gz
2026-03-08 22:55:30 (21616): Guest Log: -rwxr-xr-x. 1 atlas atlas   14993 Mar  9 02:07 init_data.xml
2026-03-08 22:55:30 (21616): Guest Log: -rwxr-xr-x. 1 atlas atlas   15845 Mar  9 02:07 start_atlas.sh
2026-03-08 22:55:30 (21616): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Mar  9 02:09 EVNT.48329618._000054.pool.root.1 -> /data/./ATLAS.root_0
2026-03-08 22:55:30 (21616): Guest Log: -rw-r--r--. 1 atlas atlas    2502 Mar  9 02:10 pandaJob.out
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas  999108 Mar  9 02:12 agis_schedconf.cvmfs.json
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas 1511578 Mar  9 02:12 agis_ddmendpoints.agis.ALL.json
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas     424 Mar  9 02:12 workernode_map.json
2026-03-08 22:55:30 (21616): Guest Log: drwx------. 5 atlas atlas    4096 Mar  9 02:12 pilot3
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas    1029 Mar  9 02:53 memory_monitor_summary.json
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas  322550 Mar  9 02:53 log.48996069._002699.job.log.tgz.1
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas      95 Mar  9 02:55 pilot_heartbeat.json
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas    7985 Mar  9 02:55 heartbeat.json
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas    4794 Mar  9 02:56 pilotlog.txt
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas  397251 Mar  9 02:56 log.48996069._002699.job.log.1
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas     188 Mar  9 02:56 output.list
2026-03-08 22:55:30 (21616): Guest Log: -rw-r--r--. 1 atlas atlas     620 Mar  9 02:56 runtime_log
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas  737280 Mar  9 02:56 result.tar.gz
2026-03-08 22:55:30 (21616): Guest Log: -rw-r--r--. 1 atlas atlas    8623 Mar  9 02:56 runtime_log.err
2026-03-08 22:55:30 (21616): Guest Log: -rw-------. 1 atlas atlas     662 Mar  9 02:56 DY1LDmCXpI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtNTLDm2cUF8n.diag
2026-03-08 22:55:30 (21616): Guest Log: Looking for outputfile HITS.48996069._002699.pool.root.1
2026-03-08 22:55:30 (21616): Guest Log: No HITS file was produced
2026-03-08 22:55:30 (21616): Guest Log: Successfully finished the ATLAS job!
2026-03-08 22:55:30 (21616): Guest Log: Copying the results back to the shared directory!
2026-03-08 22:55:30 (21616): Guest Log:  *** Contents of shared directory: ***
2026-03-08 22:55:30 (21616): Guest Log: total 524648
2026-03-08 22:55:30 (21616): Guest Log: -rwxrwxrwx. 1 root root 535868553 Mar  9 02:04 ATLAS.root_0
2026-03-08 22:55:30 (21616): Guest Log: -rwxrwxrwx. 1 root root     14993 Mar  9 02:04 init_data.xml
2026-03-08 22:55:30 (21616): Guest Log: -rwxrwxrwx. 1 root root    597938 Mar  7 00:27 input.tar.gz
2026-03-08 22:55:30 (21616): Guest Log: -rwxrwxrwx. 1 root root    737280 Mar  9 02:55 result.tar.gz
2026-03-08 22:55:30 (21616): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  7 00:27 start_atlas.sh
2026-03-08 22:55:30 (21616): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-08 22:55:30 (21616): VM Completion File Detected.
2026-03-08 22:55:30 (21616): Powering off VM.
2026-03-08 22:55:31 (21616): Successfully stopped VM.
2026-03-08 22:55:31 (21616): Deregistering VM. (boinc_f3b5f072b10c2e53, slot#3)
2026-03-08 22:55:31 (21616): Removing network bandwidth throttle group from VM.
2026-03-08 22:55:31 (21616): Removing VM from VirtualBox.
2026-03-08 22:55:36 (21616): called boinc_finish(0)

</stderr_txt>
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