Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:11:06 (5635): wrapper (7.7.26015): starting
14:11:06 (5635): wrapper: running run_atlas (--nthreads 8)
[2026-03-07 14:11:06] Arguments: --nthreads 8
[2026-03-07 14:11:06] Threads: 8
[2026-03-07 14:11:06] Checking for CVMFS
[2026-03-07 14:11:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 14:11:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 14:11:07] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 14:11:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 14:11:09] 2.11.2.0 23910 117539 134520 157001 2 93 17416149 25165824 1088 130560 154 36173956 99.812 26459004 969 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-03-07 14:11:09] CVMFS is ok
[2026-03-07 14:11:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 14:11:09] Checking for apptainer binary...
[2026-03-07 14:11:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 14:11:09] Running /usr/bin/apptainer --version
[2026-03-07 14:11:09] apptainer version 1.3.2-1.el7
[2026-03-07 14:11:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 14:11:16] cg-vwn369.simple-grid.lan
[2026-03-07 14:11:16] apptainer works
[2026-03-07 14:11:16] Set ATHENA_PROC_NUMBER=8
[2026-03-07 14:11:16] Set ATHENA_CORE_NUMBER=8
[2026-03-07 14:11:16] Starting ATLAS job with PandaID=7043830439
[2026-03-07 14:11:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 18:13:54]  *** The last 200 lines of the pilot log: ***
[2026-03-07 18:13:54] 2026-03-07 17:13:10,581 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-7043830439/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 18:13:54] 2026-03-07 17:13:10,581 | INFO     | extracted standard info from prmon json
[2026-03-07 18:13:54] 2026-03-07 17:13:10,581 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 18:13:54] 2026-03-07 17:13:10,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 18:13:54] 2026-03-07 17:13:10,582 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 18:13:54] 2026-03-07 17:13:10,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 18:13:54] 2026-03-07 17:13:10,585 | INFO     | fitting pss+swap vs Time
[2026-03-07 18:13:54] 2026-03-07 17:13:10,585 | INFO     | sum of square deviations: 3871990738.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,586 | INFO     | sum of deviations: -61963683703.5
[2026-03-07 18:13:54] 2026-03-07 17:13:10,587 | INFO     | mean x: 1772896531.5
[2026-03-07 18:13:54] 2026-03-07 17:13:10,587 | INFO     | mean y: 2512733.9353448274
[2026-03-07 18:13:54] 2026-03-07 17:13:10,587 | INFO     | intersect: 28374274793.893612
[2026-03-07 18:13:54] 2026-03-07 17:13:10,587 | INFO     | chi2: 3.393951633011994
[2026-03-07 18:13:54] 2026-03-07 17:13:10,587 | INFO     | sum of square deviations: 3627000098.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,588 | INFO     | sum of deviations: -29026091220.999992
[2026-03-07 18:13:54] 2026-03-07 17:13:10,589 | INFO     | mean x: 1772896379.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,589 | INFO     | mean y: 2532984.4273127755
[2026-03-07 18:13:54] 2026-03-07 17:13:10,589 | INFO     | intersect: 14190636274.143457
[2026-03-07 18:13:54] 2026-03-07 17:13:10,589 | INFO     | chi2: 1.7604381256658357
[2026-03-07 18:13:54] 2026-03-07 17:13:10,589 | INFO     | current chi2=1.7604381256658357 (change=48.13013513384931 %)
[2026-03-07 18:13:54] 2026-03-07 17:13:10,589 | INFO     | sum of square deviations: 3392567795.5
[2026-03-07 18:13:54] 2026-03-07 17:13:10,590 | INFO     | sum of deviations: -27915650880.999996
[2026-03-07 18:13:54] 2026-03-07 17:13:10,590 | INFO     | mean x: 1772896226.5
[2026-03-07 18:13:54] 2026-03-07 17:13:10,591 | INFO     | mean y: 2533706.891891892
[2026-03-07 18:13:54] 2026-03-07 17:13:10,591 | INFO     | intersect: 14590761589.28331
[2026-03-07 18:13:54] 2026-03-07 17:13:10,591 | INFO     | chi2: 1.7587413069124924
[2026-03-07 18:13:54] 2026-03-07 17:13:10,591 | INFO     | current chi2=1.7587413069124924 (change=0.09638616254697915 %)
[2026-03-07 18:13:54] 2026-03-07 17:13:10,591 | INFO     | right removable region: 221
[2026-03-07 18:13:54] 2026-03-07 17:13:10,591 | INFO     | sum of square deviations: 3627000098.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,592 | INFO     | sum of deviations: -97313757256.00005
[2026-03-07 18:13:54] 2026-03-07 17:13:10,592 | INFO     | mean x: 1772896684.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,593 | INFO     | mean y: 2534516.991189427
[2026-03-07 18:13:54] 2026-03-07 17:13:10,593 | INFO     | intersect: 47570009809.27981
[2026-03-07 18:13:54] 2026-03-07 17:13:10,593 | INFO     | chi2: 1.9205793879603517
[2026-03-07 18:13:54] 2026-03-07 17:13:10,593 | INFO     | current chi2=1.9205793879603517 (change=43.41170424235198 %)
[2026-03-07 18:13:54] 2026-03-07 17:13:10,593 | INFO     | sum of square deviations: 3392567795.5
[2026-03-07 18:13:54] 2026-03-07 17:13:10,594 | INFO     | sum of deviations: -95562071617.99997
[2026-03-07 18:13:54] 2026-03-07 17:13:10,594 | INFO     | mean x: 1772896836.5
[2026-03-07 18:13:54] 2026-03-07 17:13:10,594 | INFO     | mean y: 2533342.3333333335
[2026-03-07 18:13:54] 2026-03-07 17:13:10,595 | INFO     | intersect: 49941607422.34565
[2026-03-07 18:13:54] 2026-03-07 17:13:10,595 | INFO     | chi2: 1.9027502744451406
[2026-03-07 18:13:54] 2026-03-07 17:13:10,595 | INFO     | current chi2=1.9027502744451406 (change=0.9283195283140864 %)
[2026-03-07 18:13:54] 2026-03-07 17:13:10,595 | INFO     | left removable region: 20
[2026-03-07 18:13:54] 2026-03-07 17:13:10,595 | INFO     | sum of square deviations: 2518000700.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,596 | INFO     | sum of deviations: -48783918387.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,596 | INFO     | mean x: 1772896806.0
[2026-03-07 18:13:54] 2026-03-07 17:13:10,596 | INFO     | mean y: 2546940.9054726367
[2026-03-07 18:13:54] 2026-03-07 17:13:10,596 | INFO     | intersect: 34350771344.686203
[2026-03-07 18:13:54] 2026-03-07 17:13:10,597 | INFO     | chi2: 0.20659276832553536
[2026-03-07 18:13:54] 2026-03-07 17:13:10,597 | INFO     | current memory leak: -19.37 B/s (using 201 data points, chi2=0.21)
[2026-03-07 18:13:54] 2026-03-07 17:13:10,597 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-03-07 18:13:54] 2026-03-07 17:13:10,597 | INFO     | ..............................
[2026-03-07 18:13:54] 2026-03-07 17:13:10,597 | INFO     | . Timing measurements:
[2026-03-07 18:13:54] 2026-03-07 17:13:10,597 | INFO     | . get job = 0 s
[2026-03-07 18:13:54] 2026-03-07 17:13:10,598 | INFO     | . initial setup = 123 s
[2026-03-07 18:13:54] 2026-03-07 17:13:10,598 | INFO     | . payload setup = 25 s
[2026-03-07 18:13:54] 2026-03-07 17:13:10,598 | INFO     | . stage-in = 0 s
[2026-03-07 18:13:54] 2026-03-07 17:13:10,598 | INFO     | . payload execution = 14099 s
[2026-03-07 18:13:54] 2026-03-07 17:13:10,598 | INFO     | . stage-out = 3 s
[2026-03-07 18:13:54] 2026-03-07 17:13:10,598 | INFO     | . log creation = 1 s
[2026-03-07 18:13:54] 2026-03-07 17:13:10,598 | INFO     | ..............................
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | 
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | job summary report
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | --------------------------------------------------
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | PanDA job id: 7043830439
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | task id: 48966988
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | errors: (none)
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 18:13:54] 2026-03-07 17:13:11,167 | INFO     | pilot state: finished 
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | transexitcode: 0
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | exeerrorcode: 0
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | exeerrordiag: 
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | exitcode: 0
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | exitmsg: OK
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | cpuconsumptiontime: 67378 s
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | nevents: 400
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | neventsw: 0
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | pid: 14079
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | pgrp: 14079
[2026-03-07 18:13:54] 2026-03-07 17:13:11,168 | INFO     | corecount: 8
[2026-03-07 18:13:54] 2026-03-07 17:13:11,169 | INFO     | event service: False
[2026-03-07 18:13:54] 2026-03-07 17:13:11,169 | INFO     | sizes: {0: 2294756, 1: 2295441, 2: 2295902, 13: 2295902, 14128: 2326499, 14132: 2335497, 14134: 2335681, 14137: 2335875}
[2026-03-07 18:13:54] 2026-03-07 17:13:11,169 | INFO     | --------------------------------------------------
[2026-03-07 18:13:54] 2026-03-07 17:13:11,169 | INFO     | 
[2026-03-07 18:13:54] 2026-03-07 17:13:11,169 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-03-07 18:13:54] 2026-03-07 17:13:11,270 | INFO     | time since job start (14150s) is within the limit (349056.0s)
[2026-03-07 18:13:54] 2026-03-07 17:13:11,617 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,618 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,618 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,618 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,618 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,618 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,618 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,618 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,620 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 18:13:54] 2026-03-07 17:13:11,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,620 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 18:13:54] 2026-03-07 17:13:11,620 | INFO     | job 7043830439 has completed (purged errors)
[2026-03-07 18:13:54] 2026-03-07 17:13:11,620 | INFO     | overall cleanup function is called
[2026-03-07 18:13:54] 2026-03-07 17:13:12,375 | INFO     | PID=9615 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-07 18:13:54] 2026-03-07 17:13:12,375 | INFO     | .. there are 2 such processes running
[2026-03-07 18:13:54] 2026-03-07 17:13:12,630 | INFO     | --- collectZombieJob: --- 10, [14079]
[2026-03-07 18:13:54] 2026-03-07 17:13:12,630 | INFO     | zombie collector waiting for pid 14079
[2026-03-07 18:13:54] 2026-03-07 17:13:12,630 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 18:13:54] 2026-03-07 17:13:12,630 | INFO     | collected zombie processes
[2026-03-07 18:13:54] 2026-03-07 17:13:12,630 | INFO     | will attempt to kill all subprocesses of pid=14079
[2026-03-07 18:13:54] 2026-03-07 17:13:12,717 | INFO     | process IDs to be killed: [14079] (in reverse order)
[2026-03-07 18:13:54] 2026-03-07 17:13:12,805 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 18:13:54] 2026-03-07 17:13:12,806 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 18:13:54] 2026-03-07 17:13:12,808 | INFO     | did not find any defunct processes belonging to 14079
[2026-03-07 18:13:54] 2026-03-07 17:13:12,810 | INFO     | did not find any defunct processes belonging to 14079
[2026-03-07 18:13:54] 2026-03-07 17:13:12,810 | INFO     | ready for new job
[2026-03-07 18:13:54] 2026-03-07 17:13:12,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 18:13:54] 2026-03-07 17:13:12,812 | INFO     | **************************************
[2026-03-07 18:13:54] 2026-03-07 17:13:12,812 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 18:13:54] 2026-03-07 17:13:12,812 | INFO     | **************************************
[2026-03-07 18:13:54] 2026-03-07 17:13:12,813 | INFO     | 
[2026-03-07 18:13:54] 2026-03-07 17:13:12,813 | INFO     | pilot is running in a VM
[2026-03-07 18:13:54] 2026-03-07 17:13:12,813 | INFO     | architecture information:
[2026-03-07 18:13:54] 2026-03-07 17:13:12,823 | INFO     | executing command: cat /etc/os-release
[2026-03-07 18:13:54] 2026-03-07 17:13:13,088 | INFO     | cat /etc/os-release:
[2026-03-07 18:13:54] NAME="CentOS Linux"
[2026-03-07 18:13:54] VERSION="7 (Core)"
[2026-03-07 18:13:54] ID="centos"
[2026-03-07 18:13:54] ID_LIKE="rhel fedora"
[2026-03-07 18:13:54] VERSION_ID="7"
[2026-03-07 18:13:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 18:13:54] ANSI_COLOR="0;31"
[2026-03-07 18:13:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 18:13:54] HOME_URL="https://www.centos.org/"
[2026-03-07 18:13:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 18:13:54] 
[2026-03-07 18:13:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 18:13:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 18:13:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 18:13:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 18:13:54] 
[2026-03-07 18:13:54] 2026-03-07 17:13:13,088 | INFO     | **************************************
[2026-03-07 18:13:54] 2026-03-07 17:13:13,592 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-03-07 18:13:54] 2026-03-07 17:13:13,750 | INFO     | sufficient remaining disk space (495937650688 B)
[2026-03-07 18:13:54] 2026-03-07 17:13:13,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 18:13:54] 2026-03-07 17:13:13,751 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 18:13:54] 2026-03-07 17:13:13,751 | INFO     | update_server=False
[2026-03-07 18:13:54] 2026-03-07 17:13:13,751 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 18:13:54] 2026-03-07 17:13:13,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 18:13:54] 2026-03-07 17:13:13,984 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 18:13:54] 2026-03-07 17:13:14,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:13:54] 2026-03-07 17:13:14,122 | INFO     | aborting loop
[2026-03-07 18:13:54] 2026-03-07 17:13:14,277 | INFO     | all data control threads have been joined
[2026-03-07 18:13:54] 2026-03-07 17:13:14,681 | INFO     | all payload control threads have been joined
[2026-03-07 18:13:54] 2026-03-07 17:13:14,757 | INFO     | [job] retrieve thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:14,954 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,128 | INFO     | [job] job monitor thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,283 | INFO     | [data] control thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,404 | INFO     | [job] validate thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,439 | INFO     | all job control threads have been joined
[2026-03-07 18:13:54] 2026-03-07 17:13:15,503 | INFO     | [data] copytool_in thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,662 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,687 | INFO     | [payload] control thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,765 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 18:13:54] 2026-03-07 17:13:15,798 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,821 | INFO     | [payload] failed_post thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,897 | INFO     | [payload] validate_post thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,900 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:15,935 | INFO     | [data] copytool_out thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:16,445 | INFO     | [job] control thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:16,771 | INFO     | [job] queue monitor thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:17,995 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 18:13:54] 2026-03-07 17:13:43,506 | INFO     | [monitor] cgroup control has ended
[2026-03-07 18:13:54] 2026-03-07 17:13:44,222 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139790717081408)>', '<ExcThread(monitor, started 139790271883008)>']
[2026-03-07 18:13:54] 2026-03-07 17:13:44,589 | INFO     | PID=9615 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-03-07 18:13:54] 2026-03-07 17:13:44,589 | INFO     | .. there are 2 such processes running
[2026-03-07 18:13:54] 2026-03-07 17:13:44,590 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 18:13:54] 2026-03-07 17:13:44,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 18:13:54] 2026-03-07 17:13:44,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 18:13:54] 2026-03-07 17:13:44,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 18:13:54] 2026-03-07 17:13:44,590 | INFO     | [monitor] control thread has ended
[2026-03-07 18:13:54] 2026-03-07 17:13:49,248 | INFO     | all workflow threads have been joined
[2026-03-07 18:13:54] 2026-03-07 17:13:49,248 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 18:13:54] 2026-03-07 17:13:49,248 | INFO     | traces error code: 0
[2026-03-07 18:13:54] 2026-03-07 17:13:49,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 18:13:54] 2026-03-07 17:13:49,605 [wrapper] ==== pilot stdout END ====
[2026-03-07 18:13:54] 2026-03-07 17:13:49,687 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 18:13:54] 2026-03-07 17:13:49,807 [wrapper] pilotpid: 9615
[2026-03-07 18:13:54] 2026-03-07 17:13:49,921 [wrapper] Pilot exit status: 0
[2026-03-07 18:13:54] 2026-03-07 17:13:50,391 [wrapper] pandaids: 7043830439
[2026-03-07 18:13:54] 2026-03-07 17:13:51,348 [wrapper] cleanup supervisor_pilot  3833 9616
[2026-03-07 18:13:54] 2026-03-07 17:13:51,473 [wrapper] Test setup, not cleaning
[2026-03-07 18:13:54] 2026-03-07 17:13:51,588 [wrapper] apfmon messages muted
[2026-03-07 18:13:54] 2026-03-07 17:13:51,702 [wrapper] ==== wrapper stdout END ====
[2026-03-07 18:13:54] 2026-03-07 17:13:51,804 [wrapper] ==== wrapper stderr END ====
[2026-03-07 18:13:54]  *** Error codes and diagnostics ***
[2026-03-07 18:13:54]     "exeErrorCode": 0,
[2026-03-07 18:13:54]     "exeErrorDiag": "",
[2026-03-07 18:13:54]     "pilotErrorCode": 0,
[2026-03-07 18:13:54]     "pilotErrorDiag": "",
[2026-03-07 18:13:54]  *** Listing of results directory ***
[2026-03-07 18:13:54] total 409708
[2026-03-07 18:13:54] -rwx------. 1 boinc boinc     36322 Mar  7 00:36 runpilot2-wrapper.sh
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc      5111 Mar  7 00:36 queuedata.json
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc    584627 Mar  7 00:36 pilot3.tar.gz
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc       100 Mar  7 14:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 18:13:54] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 14:11 run_atlas
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc       105 Mar  7 14:11 job.xml
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc      6390 Mar  7 14:11 init_data.xml
[2026-03-07 18:13:54] -rw-r--r--. 2 boinc boinc 210420244 Mar  7 14:11 EVNT.48966985._000487.pool.root.1
[2026-03-07 18:13:54] -rw-r--r--. 2 boinc boinc     15845 Mar  7 14:11 start_atlas.sh
[2026-03-07 18:13:54] drwxrwx--x. 2 boinc boinc        68 Mar  7 14:11 shared
[2026-03-07 18:13:54] -rw-r--r--. 2 boinc boinc    597953 Mar  7 14:11 input.tar.gz
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc         0 Mar  7 14:11 boinc_lockfile
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc      2592 Mar  7 14:11 pandaJob.out
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc       415 Mar  7 14:17 workernode_map.json
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc    999177 Mar  7 14:17 agis_schedconf.cvmfs.json
[2026-03-07 18:13:54] drwx------. 5 boinc boinc      4096 Mar  7 14:17 pilot3
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc 200289426 Mar  7 18:11 HITS.48966988._012181.pool.root.1
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc       531 Mar  7 18:11 boinc_task_state.xml
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc        95 Mar  7 18:12 pilot_heartbeat.json
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc      1021 Mar  7 18:12 memory_monitor_summary.json
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc   1521291 Mar  7 18:13 agis_ddmendpoints.agis.ALL.json
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc    468200 Mar  7 18:13 log.48966988._012181.job.log.tgz.1
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc      6330 Mar  7 18:13 heartbeat.json
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc      8192 Mar  7 18:13 boinc_mmap_file
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc        28 Mar  7 18:13 wrapper_checkpoint.txt
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc      4879 Mar  7 18:13 pilotlog.txt
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc   1987015 Mar  7 18:13 log.48966988._012181.job.log.1
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc       357 Mar  7 18:13 output.list
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc       620 Mar  7 18:13 runtime_log
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc   2467840 Mar  7 18:13 result.tar.gz
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc      8816 Mar  7 18:13 runtime_log.err
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc       656 Mar  7 18:13 cxPMDmgttI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmgjRLDmRnxRJm.diag
[2026-03-07 18:13:54] -rw-r--r--. 1 boinc boinc     20835 Mar  7 18:13 stderr.txt
[2026-03-07 18:13:54] HITS file was successfully produced:
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc 200289426 Mar  7 18:11 shared/HITS.pool.root.1
[2026-03-07 18:13:54]  *** Contents of shared directory: ***
[2026-03-07 18:13:54] total 404100
[2026-03-07 18:13:54] -rw-r--r--. 2 boinc boinc 210420244 Mar  7 14:11 ATLAS.root_0
[2026-03-07 18:13:54] -rw-r--r--. 2 boinc boinc     15845 Mar  7 14:11 start_atlas.sh
[2026-03-07 18:13:54] -rw-r--r--. 2 boinc boinc    597953 Mar  7 14:11 input.tar.gz
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc 200289426 Mar  7 18:11 HITS.pool.root.1
[2026-03-07 18:13:54] -rw-------. 1 boinc boinc   2467840 Mar  7 18:13 result.tar.gz
18:13:55 (5635): run_atlas exited; CPU time 67517.566846
18:13:55 (5635): called boinc_finish(0)

</stderr_txt>
]]>

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