Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:02:10 (3872654): wrapper (7.7.26015): starting
19:02:10 (3872654): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 19:02:10] Arguments: --nthreads 4
[2026-03-08 19:02:10] Threads: 4
[2026-03-08 19:02:10] Checking for CVMFS
[2026-03-08 19:02:10] No cvmfs_config command found, will try listing directly
[2026-03-08 19:02:10] CVMFS is ok
[2026-03-08 19:02:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 19:02:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 19:02:10] Further information can be found at the LHC@home message board.
[2026-03-08 19:02:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 19:02:10] Checking for apptainer binary...
[2026-03-08 19:02:10] which: no apptainer in ((null))
[2026-03-08 19:02:10] apptainer is not installed, using version from CVMFS
[2026-03-08 19:02:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 19:02:10] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot152/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-08 19:02:10] apptainer works
[2026-03-08 19:02:10] Set ATHENA_PROC_NUMBER=4
[2026-03-08 19:02:10] Set ATHENA_CORE_NUMBER=4
[2026-03-08 19:02:10] Starting ATLAS job with PandaID=7031985359
[2026-03-08 19:02:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot152/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 20:11:35]  *** The last 200 lines of the pilot log: ***
[2026-03-08 20:11:35]  scope=mc23_13p6TeV
[2026-03-08 20:11:35]  status=None
[2026-03-08 20:11:35]  status_code=0
[2026-03-08 20:11:35]  storage_token=
[2026-03-08 20:11:35]  surl=/var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7031985359/log.48700930._000261.job.log.tgz.1
[2026-03-08 20:11:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/29/log.48700930._000261.job.log.tgz.1
[2026-03-08 20:11:35]  workdir=None
[2026-03-08 20:11:35] ]
[2026-03-08 20:11:35] 2026-03-08 19:10:37,678 | INFO     | transferring file log.48700930._000261.job.log.tgz.1 from /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7031985359/log.48700930._000261.job.log.tgz.1 to /var/lib/
[2026-03-08 20:11:35] 2026-03-08 19:10:37,679 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7031985359/log.48700930._000261.job.log.tgz.1 /var/lib/boinc/var/slot152/slots/0/
[2026-03-08 20:11:35] 2026-03-08 19:10:37,696 | INFO     | adding to output.list: log.48700930._000261.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fb/29/log.48700930._000261.job.log.tg
[2026-03-08 20:11:35] 2026-03-08 19:10:37,697 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 20:11:35] 2026-03-08 19:10:37,697 | INFO     | summary of transferred files:
[2026-03-08 20:11:35] 2026-03-08 19:10:37,697 | INFO     |  -- lfn=log.48700930._000261.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 20:11:35] 2026-03-08 19:10:37,697 | INFO     | stage-out finished correctly
[2026-03-08 20:11:35] 2026-03-08 19:10:37,747 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 20:11:35] 2026-03-08 19:10:38,009 | INFO     | job 7031985359 has state=finished
[2026-03-08 20:11:35] 2026-03-08 19:10:38,010 | INFO     | preparing for final server update for job 7031985359 in state='finished'
[2026-03-08 20:11:35] 2026-03-08 19:10:38,010 | INFO     | reading metadata from: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7031985359/jobReport.json
[2026-03-08 20:11:35] 2026-03-08 19:10:38,012 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot152/slots/0/workernode_map.json
[2026-03-08 20:11:35] 2026-03-08 19:10:38,012 | INFO     | this job has now completed (state=finished)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,012 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,012 | INFO     | log transfer has been attempted: DONE
[2026-03-08 20:11:35] 2026-03-08 19:10:38,012 | INFO     | job 7031985359 has finished - writing final server update
[2026-03-08 20:11:35] 2026-03-08 19:10:38,013 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18397/.job.ad'
[2026-03-08 20:11:35] 2026-03-08 19:10:38,013 | INFO     | total number of processed events: 400 (read)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,031 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7031985359/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,031 | INFO     | extracted standard info from prmon json
[2026-03-08 20:11:35] 2026-03-08 19:10:38,031 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 20:11:35] 2026-03-08 19:10:38,031 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 20:11:35] 2026-03-08 19:10:38,031 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 20:11:35] 2026-03-08 19:10:38,032 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | fitting pss+swap vs Time
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | sum of square deviations: 66959395.0
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | sum of deviations: 260408969.5
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | mean x: 1772995067.5
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | mean y: 2309214.316666667
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | intersect: -6892971402.484874
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | chi2: 7.421247775100132e-05
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | current memory leak: 3.89 B/s (using 60 data points, chi2=0.00)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | could have reported an average CPU frequency of 3593 MHz (6 samples)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | ..............................
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | . Timing measurements:
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | . get job = 0 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,033 | INFO     | . initial setup = 5 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,034 | INFO     | . payload setup = 5 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,034 | INFO     | . stage-in = 0 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,034 | INFO     | . payload execution = 4074 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,034 | INFO     | . stage-out = 0 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,034 | INFO     | . log creation = 0 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,034 | INFO     | ..............................
[2026-03-08 20:11:35] 2026-03-08 19:10:38,081 | INFO     | 
[2026-03-08 20:11:35] 2026-03-08 19:10:38,081 | INFO     | job summary report
[2026-03-08 20:11:35] 2026-03-08 19:10:38,081 | INFO     | --------------------------------------------------
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | PanDA job id: 7031985359
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | task id: 48700930
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | errors: (none)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | pilot state: finished 
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | transexitcode: 0
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | exeerrorcode: 0
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | exeerrordiag: 
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | exitcode: 0
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | exitmsg: OK
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | cpuconsumptiontime: 15500 s
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | nevents: 400
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | neventsw: 0
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | pid: 3883377
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | pgrp: 3883377
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | corecount: 4
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | event service: False
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | sizes: {0: 2295757, 11: 2295757, 4083: 2330644, 4084: 2330838}
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | --------------------------------------------------
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | 
[2026-03-08 20:11:35] 2026-03-08 19:10:38,082 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot152/slots/0
[2026-03-08 20:11:35] 2026-03-08 19:10:38,101 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,101 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | job 7031985359 has completed (purged errors)
[2026-03-08 20:11:35] 2026-03-08 19:10:38,102 | INFO     | overall cleanup function is called
[2026-03-08 20:11:35] 2026-03-08 19:10:39,109 | INFO     | --- collectZombieJob: --- 10, [3883377]
[2026-03-08 20:11:35] 2026-03-08 19:10:39,109 | INFO     | zombie collector waiting for pid 3883377
[2026-03-08 20:11:35] 2026-03-08 19:10:39,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 20:11:35] 2026-03-08 19:10:39,109 | INFO     | collected zombie processes
[2026-03-08 20:11:35] 2026-03-08 19:10:39,109 | INFO     | will attempt to kill all subprocesses of pid=3883377
[2026-03-08 20:11:35] 2026-03-08 19:10:39,618 | INFO     | process IDs to be killed: [3883377] (in reverse order)
[2026-03-08 20:11:35] 2026-03-08 19:10:39,836 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 20:11:35] 2026-03-08 19:10:39,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 20:11:35] 2026-03-08 19:10:39,866 | INFO     | did not find any defunct processes belonging to 3883377
[2026-03-08 20:11:35] 2026-03-08 19:10:39,895 | INFO     | did not find any defunct processes belonging to 3883377
[2026-03-08 20:11:35] 2026-03-08 19:10:39,895 | INFO     | ready for new job
[2026-03-08 20:11:35] 2026-03-08 19:10:39,895 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 20:11:35] 2026-03-08 19:10:39,896 | INFO     | **************************************
[2026-03-08 20:11:35] 2026-03-08 19:10:39,896 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 20:11:35] 2026-03-08 19:10:39,896 | INFO     | **************************************
[2026-03-08 20:11:35] 2026-03-08 19:10:39,896 | INFO     | 
[2026-03-08 20:11:35] 2026-03-08 19:10:39,902 | INFO     | architecture information:
[2026-03-08 20:11:35] 2026-03-08 19:10:39,903 | INFO     | executing command: cat /etc/os-release
[2026-03-08 20:11:35] 2026-03-08 19:10:39,917 | INFO     | cat /etc/os-release:
[2026-03-08 20:11:35] NAME="CentOS Linux"
[2026-03-08 20:11:35] VERSION="7 (Core)"
[2026-03-08 20:11:35] ID="centos"
[2026-03-08 20:11:35] ID_LIKE="rhel fedora"
[2026-03-08 20:11:35] VERSION_ID="7"
[2026-03-08 20:11:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 20:11:35] ANSI_COLOR="0;31"
[2026-03-08 20:11:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 20:11:35] HOME_URL="https://www.centos.org/"
[2026-03-08 20:11:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 20:11:35] 
[2026-03-08 20:11:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 20:11:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 20:11:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 20:11:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 20:11:35] 
[2026-03-08 20:11:35] 2026-03-08 19:10:39,917 | INFO     | **************************************
[2026-03-08 20:11:35] 2026-03-08 19:10:40,420 | INFO     | executing command: df -mP /var/lib/boinc/var/slot152/slots/0
[2026-03-08 20:11:35] 2026-03-08 19:10:40,435 | INFO     | sufficient remaining disk space (20359151616 B)
[2026-03-08 20:11:35] 2026-03-08 19:10:40,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 20:11:35] 2026-03-08 19:10:40,436 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 20:11:35] 2026-03-08 19:10:40,436 | INFO     | update_server=False
[2026-03-08 20:11:35] 2026-03-08 19:10:40,436 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 20:11:35] 2026-03-08 19:10:40,623 | INFO     | all job control threads have been joined
[2026-03-08 20:11:35] 2026-03-08 19:10:40,752 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 20:11:35] 2026-03-08 19:10:40,765 | WARNING  | process 3883377 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 20:11:35] 2026-03-08 19:10:40,809 | INFO     | all payload control threads have been joined
[2026-03-08 20:11:35] 2026-03-08 19:10:41,088 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:11:35] 2026-03-08 19:10:41,088 | INFO     | using path: /var/lib/boinc/var/slot152/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 20:11:35] 2026-03-08 19:10:41,089 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-08 20:11:35] 2026-03-08 19:10:41,089 | WARNING  | maxPSS not found in memory monitor output
[2026-03-08 20:11:35] 2026-03-08 19:10:41,089 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7031985359/payload.stdout) since it has not been created yet
[2026-03-08 20:11:35] 2026-03-08 19:10:41,089 | INFO     | executing command: df -mP /var/lib/boinc/var/slot152/slots/0
[2026-03-08 20:11:35] 2026-03-08 19:10:41,104 | INFO     | sufficient remaining disk space (20359151616 B)
[2026-03-08 20:11:35] 2026-03-08 19:10:41,104 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-08 20:11:35] 2026-03-08 19:10:41,104 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot152/slots/0/PanDA_Pilot-7031985359/HITS.48700930._000261.pool.root.1 since it does not exist
[2026-03-08 20:11:35] 2026-03-08 19:10:41,300 | INFO     | all data control threads have been joined
[2026-03-08 20:11:35] 2026-03-08 19:10:41,444 | INFO     | [job] retrieve thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:41,563 | INFO     | number of running child processes to parent process 3883377: 1
[2026-03-08 20:11:35] 2026-03-08 19:10:41,564 | INFO     | maximum number of monitored processes: 6
[2026-03-08 20:11:35] 2026-03-08 19:10:41,564 | INFO     | aborting job monitoring since job object (job id=7031985359) has expired
[2026-03-08 20:11:35] 2026-03-08 19:10:41,564 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:11:35] 2026-03-08 19:10:41,564 | INFO     | will abort loop
[2026-03-08 20:11:35] 2026-03-08 19:10:41,629 | INFO     | [job] control thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:41,812 | INFO     | [payload] control thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:41,959 | INFO     | [job] validate thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,066 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,181 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,213 | INFO     | [data] copytool_in thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,305 | INFO     | [data] control thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,415 | INFO     | [payload] failed_post thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,556 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,569 | INFO     | [job] job monitor thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:42,756 | INFO     | [data] copytool_out thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:43,023 | INFO     | [payload] validate_post thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:43,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 20:11:35] 2026-03-08 19:10:43,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 20:11:35] 2026-03-08 19:10:44,097 | INFO     | [job] queue monitor thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:47,808 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:10:50,678 | INFO     | job.realtimelogging is not enabled
[2026-03-08 20:11:35] 2026-03-08 19:10:51,679 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 20:11:35] 2026-03-08 19:11:10,542 | INFO     | PID=3877225 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 20:11:35] 2026-03-08 19:11:10,542 | INFO     | .. there are 47 such processes running
[2026-03-08 20:11:35] 2026-03-08 19:11:10,543 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 20:11:35] 2026-03-08 19:11:10,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 20:11:35] 2026-03-08 19:11:10,543 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 20:11:35] 2026-03-08 19:11:29,339 | INFO     | [monitor] cgroup control has ended
[2026-03-08 20:11:35] 2026-03-08 19:11:30,216 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22642264278848)>', '<ExcThread(monitor, started 22642026624768)>']
[2026-03-08 20:11:35] 2026-03-08 19:11:30,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 20:11:35] 2026-03-08 19:11:30,638 | INFO     | [monitor] control thread has ended
[2026-03-08 20:11:35] 2026-03-08 19:11:35,225 | INFO     | all workflow threads have been joined
[2026-03-08 20:11:35] 2026-03-08 19:11:35,226 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 20:11:35] 2026-03-08 19:11:35,226 | INFO     | traces error code: 0
[2026-03-08 20:11:35] 2026-03-08 19:11:35,226 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 20:11:35] 2026-03-08 19:11:35,392 [wrapper] ==== pilot stdout END ====
[2026-03-08 20:11:35] 2026-03-08 19:11:35,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 20:11:35] 2026-03-08 19:11:35,395 [wrapper] pilotpid: 3877225
[2026-03-08 20:11:35] 2026-03-08 19:11:35,396 [wrapper] Pilot exit status: 0
[2026-03-08 20:11:35] 2026-03-08 19:11:35,403 [wrapper] pandaids: 7031985359
[2026-03-08 20:11:35] 2026-03-08 19:11:35,531 [wrapper] cleanup supervisor_pilot  233241 3877226
[2026-03-08 20:11:35] 2026-03-08 19:11:35,536 [wrapper] Test setup, not cleaning
[2026-03-08 20:11:35] 2026-03-08 19:11:35,539 [wrapper] apfmon messages muted
[2026-03-08 20:11:35] 2026-03-08 19:11:35,541 [wrapper] ==== wrapper stdout END ====
[2026-03-08 20:11:35] 2026-03-08 19:11:35,544 [wrapper] ==== wrapper stderr END ====
[2026-03-08 20:11:35]  *** Error codes and diagnostics ***
[2026-03-08 20:11:35]     "exeErrorCode": 0,
[2026-03-08 20:11:35]     "exeErrorDiag": "",
[2026-03-08 20:11:35]     "pilotErrorCode": 0,
[2026-03-08 20:11:35]     "pilotErrorDiag": "",
[2026-03-08 20:11:35]  *** Listing of results directory ***
[2026-03-08 20:11:35] total 342740
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc      5111 Feb 27 19:16 queuedata.json
[2026-03-08 20:11:35] -rwx------. 1 boinc boinc     36322 Feb 27 19:17 runpilot2-wrapper.sh
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc    584627 Feb 27 19:17 pilot3.tar.gz
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc       100 Mar  8 19:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 20:11:35] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 19:02 run_atlas
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc       105 Mar  8 19:02 job.xml
[2026-03-08 20:11:35] -rw-r--r--. 2 boinc boinc 191046401 Mar  8 19:02 EVNT.48700928._000011.pool.root.1
[2026-03-08 20:11:35] -rw-r--r--. 2 boinc boinc     15845 Mar  8 19:02 start_atlas.sh
[2026-03-08 20:11:35] drwxrwx--x. 2 boinc boinc      4096 Mar  8 19:02 shared
[2026-03-08 20:11:35] -rw-r--r--. 2 boinc boinc    597934 Mar  8 19:02 input.tar.gz
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc      6707 Mar  8 19:02 init_data.xml
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc         0 Mar  8 19:02 boinc_lockfile
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc      2516 Mar  8 19:02 pandaJob.out
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc    999212 Mar  8 19:02 agis_schedconf.cvmfs.json
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc   1521291 Mar  8 19:02 agis_ddmendpoints.agis.ALL.json
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc       445 Mar  8 19:02 workernode_map.json
[2026-03-08 20:11:35] drwx------. 5 boinc boinc      4096 Mar  8 19:02 pilot3
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc 154255127 Mar  8 20:10 HITS.48700930._000261.pool.root.1
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc       530 Mar  8 20:10 boinc_task_state.xml
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc      1042 Mar  8 20:10 memory_monitor_summary.json
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc    254214 Mar  8 20:10 log.48700930._000261.job.log.tgz.1
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc      6357 Mar  8 20:10 heartbeat.json
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc        95 Mar  8 20:11 pilot_heartbeat.json
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc      8192 Mar  8 20:11 boinc_mmap_file
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc        27 Mar  8 20:11 wrapper_checkpoint.txt
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc      6447 Mar  8 20:11 pilotlog.txt
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc    609282 Mar  8 20:11 log.48700930._000261.job.log.1
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc       357 Mar  8 20:11 output.list
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc       620 Mar  8 20:11 runtime_log
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc    880640 Mar  8 20:11 result.tar.gz
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc      9221 Mar  8 20:11 runtime_log.err
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc       662 Mar  8 20:11 fRhKDmjZHG9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1P5KDmFyL5em.diag
[2026-03-08 20:11:35] -rw-r--r--. 1 boinc boinc     21994 Mar  8 20:11 stderr.txt
[2026-03-08 20:11:35] HITS file was successfully produced:
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc 154255127 Mar  8 20:10 shared/HITS.pool.root.1
[2026-03-08 20:11:35]  *** Contents of shared directory: ***
[2026-03-08 20:11:35] total 338680
[2026-03-08 20:11:35] -rw-r--r--. 2 boinc boinc 191046401 Mar  8 19:02 ATLAS.root_0
[2026-03-08 20:11:35] -rw-r--r--. 2 boinc boinc     15845 Mar  8 19:02 start_atlas.sh
[2026-03-08 20:11:35] -rw-r--r--. 2 boinc boinc    597934 Mar  8 19:02 input.tar.gz
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc 154255127 Mar  8 20:10 HITS.pool.root.1
[2026-03-08 20:11:35] -rw-------. 1 boinc boinc    880640 Mar  8 20:11 result.tar.gz
20:11:36 (3872654): run_atlas exited; CPU time 15680.979570
20:11:36 (3872654): called boinc_finish(0)

</stderr_txt>
]]>

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