Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:16:47 (1921713): wrapper (7.7.26015): starting
15:16:47 (1921713): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 15:16:47] Arguments: --nthreads 4
[2026-03-08 15:16:47] Threads: 4
[2026-03-08 15:16:47] Checking for CVMFS
[2026-03-08 15:16:47] No cvmfs_config command found, will try listing directly
[2026-03-08 15:16:47] CVMFS is ok
[2026-03-08 15:16:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 15:16:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 15:16:47] Further information can be found at the LHC@home message board.
[2026-03-08 15:16:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 15:16:47] Checking for apptainer binary...
[2026-03-08 15:16:47] which: no apptainer in ((null))
[2026-03-08 15:16:47] apptainer is not installed, using version from CVMFS
[2026-03-08 15:16:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 15:16:47] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot164/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-08 15:16:47] apptainer works
[2026-03-08 15:16:47] Set ATHENA_PROC_NUMBER=4
[2026-03-08 15:16:47] Set ATHENA_CORE_NUMBER=4
[2026-03-08 15:16:47] Starting ATLAS job with PandaID=7043440367
[2026-03-08 15:16:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot164/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 16:54:15]  *** The last 200 lines of the pilot log: ***
[2026-03-08 16:54:15]  is_tar=False
[2026-03-08 16:54:15]  lfn=log.48996069._002127.job.log.tgz.1
[2026-03-08 16:54:15]  mtime=0
[2026-03-08 16:54:15]  protocol_id=None
[2026-03-08 16:54:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 16:54:15]  replicas=None
[2026-03-08 16:54:15]  scope=mc23_13p6TeV
[2026-03-08 16:54:15]  status=None
[2026-03-08 16:54:15]  status_code=0
[2026-03-08 16:54:15]  storage_token=
[2026-03-08 16:54:15]  surl=/var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043440367/log.48996069._002127.job.log.tgz.1
[2026-03-08 16:54:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/56/log.48996069._002127.job.log.tgz.1
[2026-03-08 16:54:15]  workdir=None
[2026-03-08 16:54:15] ]
[2026-03-08 16:54:15] 2026-03-08 15:53:24,730 | INFO     | transferring file log.48996069._002127.job.log.tgz.1 from /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043440367/log.48996069._002127.job.log.tgz.1 to /var/lib/
[2026-03-08 16:54:15] 2026-03-08 15:53:24,730 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043440367/log.48996069._002127.job.log.tgz.1 /var/lib/boinc/var/slot164/slots/0/
[2026-03-08 16:54:15] 2026-03-08 15:53:24,744 | INFO     | adding to output.list: log.48996069._002127.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/60/56/log.48996069._002127.job.log.tg
[2026-03-08 16:54:15] 2026-03-08 15:53:24,745 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 16:54:15] 2026-03-08 15:53:24,745 | INFO     | summary of transferred files:
[2026-03-08 16:54:15] 2026-03-08 15:53:24,745 | INFO     |  -- lfn=log.48996069._002127.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 16:54:15] 2026-03-08 15:53:24,745 | INFO     | stage-out finished correctly
[2026-03-08 16:54:15] 2026-03-08 15:53:25,688 | INFO     | time since job start (5785s) is within the limit (349056.0s)
[2026-03-08 16:54:15] 2026-03-08 15:53:27,035 | INFO     | monitor loop #418: job 0:7043440367 is in state 'finished'
[2026-03-08 16:54:15] 2026-03-08 15:53:27,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 16:54:15] 2026-03-08 15:53:27,694 | INFO     | time since job start (5787s) is within the limit (349056.0s)
[2026-03-08 16:54:15] 2026-03-08 15:53:28,071 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 16:54:15] 2026-03-08 15:53:29,538 | INFO     | monitor loop #419: job 0:7043440367 is in state 'finished'
[2026-03-08 16:54:15] 2026-03-08 15:53:29,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 16:54:15] 2026-03-08 15:53:29,699 | INFO     | time since job start (5789s) is within the limit (349056.0s)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,208 | INFO     | job 7043440367 has state=finished
[2026-03-08 16:54:15] 2026-03-08 15:53:30,211 | INFO     | preparing for final server update for job 7043440367 in state='finished'
[2026-03-08 16:54:15] 2026-03-08 15:53:30,212 | INFO     | reading metadata from: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043440367/jobReport.json
[2026-03-08 16:54:15] 2026-03-08 15:53:30,213 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot164/slots/0/workernode_map.json
[2026-03-08 16:54:15] 2026-03-08 15:53:30,213 | INFO     | this job has now completed (state=finished)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,213 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,213 | INFO     | log transfer has been attempted: DONE
[2026-03-08 16:54:15] 2026-03-08 15:53:30,213 | INFO     | job 7043440367 has finished - writing final server update
[2026-03-08 16:54:15] 2026-03-08 15:53:30,213 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18445/.job.ad'
[2026-03-08 16:54:15] 2026-03-08 15:53:30,213 | INFO     | total number of processed events: 400 (read)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,231 | INFO     | using path: /var/lib/boinc/var/slot164/slots/0/PanDA_Pilot-7043440367/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,232 | INFO     | extracted standard info from prmon json
[2026-03-08 16:54:15] 2026-03-08 15:53:30,232 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 16:54:15] 2026-03-08 15:53:30,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 16:54:15] 2026-03-08 15:53:30,232 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 16:54:15] 2026-03-08 15:53:30,232 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 16:54:15] 2026-03-08 15:53:30,233 | INFO     | fitting pss+swap vs Time
[2026-03-08 16:54:15] 2026-03-08 15:53:30,233 | INFO     | sum of square deviations: 211285822.0
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | sum of deviations: -1961330621.0000002
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | mean x: 1772982399.5
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | mean y: 2348532.3636363638
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | intersect: 16460644871.02381
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | chi2: 0.0012370245978694833
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | current memory leak: -9.28 B/s (using 88 data points, chi2=0.00)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | could have reported an average CPU frequency of 3592 MHz (7 samples)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | ..............................
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . Timing measurements:
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . get job = 0 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . initial setup = 5 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . payload setup = 5 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . stage-in = 0 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . payload execution = 5764 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . stage-out = 0 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | . log creation = 0 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,234 | INFO     | ..............................
[2026-03-08 16:54:15] 2026-03-08 15:53:30,282 | INFO     | 
[2026-03-08 16:54:15] 2026-03-08 15:53:30,282 | INFO     | job summary report
[2026-03-08 16:54:15] 2026-03-08 15:53:30,282 | INFO     | --------------------------------------------------
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | PanDA job id: 7043440367
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | task id: 48996069
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | errors: (none)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | pilot state: finished 
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | transexitcode: 0
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | exeerrorcode: 0
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | exeerrordiag: 
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | exitcode: 0
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | exitmsg: OK
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | cpuconsumptiontime: 21917 s
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | nevents: 400
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | neventsw: 0
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | pid: 1932185
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | pgrp: 1932185
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | corecount: 4
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | event service: False
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | sizes: {0: 2295735, 11: 2295735, 5773: 2322424, 5774: 2331446, 5777: 2331502, 5779: 2331696}
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | --------------------------------------------------
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | 
[2026-03-08 16:54:15] 2026-03-08 15:53:30,283 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot164/slots/0
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 16:54:15] 2026-03-08 15:53:30,302 | INFO     | job 7043440367 has completed (purged errors)
[2026-03-08 16:54:15] 2026-03-08 15:53:30,302 | INFO     | overall cleanup function is called
[2026-03-08 16:54:15] 2026-03-08 15:53:31,309 | INFO     | --- collectZombieJob: --- 10, [1932185]
[2026-03-08 16:54:15] 2026-03-08 15:53:31,309 | INFO     | zombie collector waiting for pid 1932185
[2026-03-08 16:54:15] 2026-03-08 15:53:31,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 16:54:15] 2026-03-08 15:53:31,309 | INFO     | collected zombie processes
[2026-03-08 16:54:15] 2026-03-08 15:53:31,309 | INFO     | will attempt to kill all subprocesses of pid=1932185
[2026-03-08 16:54:15] 2026-03-08 15:53:31,776 | INFO     | process IDs to be killed: [1932185] (in reverse order)
[2026-03-08 16:54:15] 2026-03-08 15:53:32,013 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 16:54:15] 2026-03-08 15:53:32,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 16:54:15] 2026-03-08 15:53:32,043 | INFO     | did not find any defunct processes belonging to 1932185
[2026-03-08 16:54:15] 2026-03-08 15:53:32,071 | INFO     | did not find any defunct processes belonging to 1932185
[2026-03-08 16:54:15] 2026-03-08 15:53:32,072 | INFO     | ready for new job
[2026-03-08 16:54:15] 2026-03-08 15:53:32,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 16:54:15] 2026-03-08 15:53:32,073 | INFO     | **************************************
[2026-03-08 16:54:15] 2026-03-08 15:53:32,073 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 16:54:15] 2026-03-08 15:53:32,073 | INFO     | **************************************
[2026-03-08 16:54:15] 2026-03-08 15:53:32,073 | INFO     | 
[2026-03-08 16:54:15] 2026-03-08 15:53:32,079 | INFO     | architecture information:
[2026-03-08 16:54:15] 2026-03-08 15:53:32,079 | INFO     | executing command: cat /etc/os-release
[2026-03-08 16:54:15] 2026-03-08 15:53:32,091 | INFO     | cat /etc/os-release:
[2026-03-08 16:54:15] NAME="CentOS Linux"
[2026-03-08 16:54:15] VERSION="7 (Core)"
[2026-03-08 16:54:15] ID="centos"
[2026-03-08 16:54:15] ID_LIKE="rhel fedora"
[2026-03-08 16:54:15] VERSION_ID="7"
[2026-03-08 16:54:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 16:54:15] ANSI_COLOR="0;31"
[2026-03-08 16:54:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 16:54:15] HOME_URL="https://www.centos.org/"
[2026-03-08 16:54:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 16:54:15] 
[2026-03-08 16:54:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 16:54:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 16:54:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 16:54:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 16:54:15] 
[2026-03-08 16:54:15] 2026-03-08 15:53:32,092 | INFO     | **************************************
[2026-03-08 16:54:15] 2026-03-08 15:53:32,595 | INFO     | executing command: df -mP /var/lib/boinc/var/slot164/slots/0
[2026-03-08 16:54:15] 2026-03-08 15:53:32,616 | INFO     | sufficient remaining disk space (19743637504 B)
[2026-03-08 16:54:15] 2026-03-08 15:53:32,616 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 16:54:15] 2026-03-08 15:53:32,616 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 16:54:15] 2026-03-08 15:53:32,616 | INFO     | update_server=False
[2026-03-08 16:54:15] 2026-03-08 15:53:32,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 16:54:15] 2026-03-08 15:53:32,729 | INFO     | all job control threads have been joined
[2026-03-08 16:54:15] 2026-03-08 15:53:32,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 16:54:15] 2026-03-08 15:53:32,907 | INFO     | all payload control threads have been joined
[2026-03-08 16:54:15] 2026-03-08 15:53:33,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:54:15] 2026-03-08 15:53:33,047 | INFO     | aborting loop
[2026-03-08 16:54:15] 2026-03-08 15:53:33,621 | INFO     | [job] retrieve thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:33,712 | INFO     | all data control threads have been joined
[2026-03-08 16:54:15] 2026-03-08 15:53:33,734 | INFO     | [data] copytool_in thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:33,734 | INFO     | [job] control thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:33,821 | INFO     | [payload] failed_post thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:33,912 | INFO     | [payload] control thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:33,982 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:34,052 | INFO     | [job] job monitor thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:34,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 16:54:15] 2026-03-08 15:53:34,629 | INFO     | [payload] validate_post thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:34,717 | INFO     | [data] control thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:34,805 | INFO     | [data] copytool_out thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:34,849 | INFO     | [job] validate thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:35,118 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:35,119 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:35,292 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:54:15] 2026-03-08 15:53:36,297 | INFO     | [job] queue monitor thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:38,132 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:53:43,196 | INFO     | job.realtimelogging is not enabled
[2026-03-08 16:54:15] 2026-03-08 15:53:44,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 16:54:15] 2026-03-08 15:54:03,314 | INFO     | PID=1926268 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 16:54:15] 2026-03-08 15:54:03,314 | INFO     | .. there are 47 such processes running
[2026-03-08 16:54:15] 2026-03-08 15:54:03,315 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 16:54:15] 2026-03-08 15:54:03,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 16:54:15] 2026-03-08 15:54:03,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 16:54:15] 2026-03-08 15:54:09,277 | INFO     | [monitor] cgroup control has ended
[2026-03-08 16:54:15] 2026-03-08 15:54:10,481 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23039326811968)>', '<ExcThread(monitor, started 23039090902784)>']
[2026-03-08 16:54:15] 2026-03-08 15:54:11,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 16:54:15] 2026-03-08 15:54:11,355 | INFO     | [monitor] control thread has ended
[2026-03-08 16:54:15] 2026-03-08 15:54:15,506 | INFO     | all workflow threads have been joined
[2026-03-08 16:54:15] 2026-03-08 15:54:15,506 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 16:54:15] 2026-03-08 15:54:15,506 | INFO     | traces error code: 0
[2026-03-08 16:54:15] 2026-03-08 15:54:15,506 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 16:54:15] 2026-03-08 15:54:15,631 [wrapper] ==== pilot stdout END ====
[2026-03-08 16:54:15] 2026-03-08 15:54:15,633 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 16:54:15] 2026-03-08 15:54:15,635 [wrapper] pilotpid: 1926268
[2026-03-08 16:54:15] 2026-03-08 15:54:15,638 [wrapper] Pilot exit status: 0
[2026-03-08 16:54:15] 2026-03-08 15:54:15,656 [wrapper] pandaids: 7043440367
[2026-03-08 16:54:15] 2026-03-08 15:54:15,788 [wrapper] cleanup supervisor_pilot 2641646 1926269
[2026-03-08 16:54:15] 2026-03-08 15:54:15,791 [wrapper] Test setup, not cleaning
[2026-03-08 16:54:15] 2026-03-08 15:54:15,793 [wrapper] apfmon messages muted
[2026-03-08 16:54:15] 2026-03-08 15:54:15,795 [wrapper] ==== wrapper stdout END ====
[2026-03-08 16:54:15] 2026-03-08 15:54:15,798 [wrapper] ==== wrapper stderr END ====
[2026-03-08 16:54:15]  *** Error codes and diagnostics ***
[2026-03-08 16:54:15]     "exeErrorCode": 0,
[2026-03-08 16:54:15]     "exeErrorDiag": "",
[2026-03-08 16:54:15]     "pilotErrorCode": 0,
[2026-03-08 16:54:15]     "pilotErrorDiag": "",
[2026-03-08 16:54:15]  *** Listing of results directory ***
[2026-03-08 16:54:15] total 729932
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc    584627 Mar  6 18:41 pilot3.tar.gz
[2026-03-08 16:54:15] -rwx------. 1 boinc boinc     36322 Mar  6 19:12 runpilot2-wrapper.sh
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc      5111 Mar  6 19:12 queuedata.json
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc       100 Mar  8 15:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 16:54:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 15:16 run_atlas
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc       105 Mar  8 15:16 job.xml
[2026-03-08 16:54:15] -rw-r--r--. 2 boinc boinc     15845 Mar  8 15:16 start_atlas.sh
[2026-03-08 16:54:15] drwxrwx--x. 2 boinc boinc      4096 Mar  8 15:16 shared
[2026-03-08 16:54:15] -rw-r--r--. 2 boinc boinc    597941 Mar  8 15:16 input.tar.gz
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc      6707 Mar  8 15:16 init_data.xml
[2026-03-08 16:54:15] -rw-r--r--. 2 boinc boinc 537077361 Mar  8 15:16 EVNT.48329618._000043.pool.root.1
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc         0 Mar  8 15:16 boinc_lockfile
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc      2501 Mar  8 15:16 pandaJob.out
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc    999212 Mar  8 15:16 agis_schedconf.cvmfs.json
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc   1521291 Mar  8 15:16 agis_ddmendpoints.agis.ALL.json
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc       444 Mar  8 15:16 workernode_map.json
[2026-03-08 16:54:15] drwx------. 5 boinc boinc      4096 Mar  8 15:17 pilot3
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc 204159961 Mar  8 16:52 HITS.48996069._002127.pool.root.1
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc       530 Mar  8 16:53 boinc_task_state.xml
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc      1030 Mar  8 16:53 memory_monitor_summary.json
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc    298498 Mar  8 16:53 log.48996069._002127.job.log.tgz.1
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc      6355 Mar  8 16:53 heartbeat.json
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc        95 Mar  8 16:54 pilot_heartbeat.json
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc      8192 Mar  8 16:54 boinc_mmap_file
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc        27 Mar  8 16:54 wrapper_checkpoint.txt
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc      4902 Mar  8 16:54 pilotlog.txt
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc    837231 Mar  8 16:54 log.48996069._002127.job.log.1
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc       357 Mar  8 16:54 output.list
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc       620 Mar  8 16:54 runtime_log
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc   1157120 Mar  8 16:54 result.tar.gz
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc      9221 Mar  8 16:54 runtime_log.err
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc       663 Mar  8 16:54 UZJNDm0poI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmgHTLDmgU1KDn.diag
[2026-03-08 16:54:15] -rw-r--r--. 1 boinc boinc     21434 Mar  8 16:54 stderr.txt
[2026-03-08 16:54:15] HITS file was successfully produced:
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc 204159961 Mar  8 16:52 shared/HITS.pool.root.1
[2026-03-08 16:54:15]  *** Contents of shared directory: ***
[2026-03-08 16:54:15] total 725608
[2026-03-08 16:54:15] -rw-r--r--. 2 boinc boinc     15845 Mar  8 15:16 start_atlas.sh
[2026-03-08 16:54:15] -rw-r--r--. 2 boinc boinc    597941 Mar  8 15:16 input.tar.gz
[2026-03-08 16:54:15] -rw-r--r--. 2 boinc boinc 537077361 Mar  8 15:16 ATLAS.root_0
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc 204159961 Mar  8 16:52 HITS.pool.root.1
[2026-03-08 16:54:15] -rw-------. 1 boinc boinc   1157120 Mar  8 16:54 result.tar.gz
16:54:17 (1921713): run_atlas exited; CPU time 22165.115436
16:54:17 (1921713): called boinc_finish(0)

</stderr_txt>
]]>

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