Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:29:49 (1948186): wrapper (7.7.26015): starting
07:29:49 (1948186): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 07:29:49] Arguments: --nthreads 4
[2026-03-08 07:29:49] Threads: 4
[2026-03-08 07:29:49] Checking for CVMFS
[2026-03-08 07:29:49] No cvmfs_config command found, will try listing directly
[2026-03-08 07:29:49] CVMFS is ok
[2026-03-08 07:29:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 07:29:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 07:29:49] Further information can be found at the LHC@home message board.
[2026-03-08 07:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 07:29:49] Checking for apptainer binary...
[2026-03-08 07:29:49] which: no apptainer in ((null))
[2026-03-08 07:29:49] apptainer is not installed, using version from CVMFS
[2026-03-08 07:29:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 07:29:49] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2026-03-08 07:29:49] apptainer works
[2026-03-08 07:29:49] Set ATHENA_PROC_NUMBER=4
[2026-03-08 07:29:49] Set ATHENA_CORE_NUMBER=4
[2026-03-08 07:29:49] Starting ATLAS job with PandaID=7043413323
[2026-03-08 07:29:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 09:02:15]  *** The last 200 lines of the pilot log: ***
[2026-03-08 09:02:15]  guid=4e62748c-2d9c-4cfd-9a3c-aec8d98e8e8d
[2026-03-08 09:02:15]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 09:02:15]  is_altstaged=None
[2026-03-08 09:02:15]  is_tar=False
[2026-03-08 09:02:15]  lfn=log.48996069._001936.job.log.tgz.1
[2026-03-08 09:02:15]  mtime=0
[2026-03-08 09:02:15]  protocol_id=None
[2026-03-08 09:02:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 09:02:15]  replicas=None
[2026-03-08 09:02:15]  scope=mc23_13p6TeV
[2026-03-08 09:02:15]  status=None
[2026-03-08 09:02:15]  status_code=0
[2026-03-08 09:02:15]  storage_token=
[2026-03-08 09:02:15]  surl=/var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043413323/log.48996069._001936.job.log.tgz.1
[2026-03-08 09:02:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/6d/log.48996069._001936.job.log.tgz.1
[2026-03-08 09:02:15]  workdir=None
[2026-03-08 09:02:15] ]
[2026-03-08 09:02:15] 2026-03-08 08:01:11,833 | INFO     | transferring file log.48996069._001936.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043413323/log.48996069._001936.job.log.tgz.1 to /var/lib/
[2026-03-08 09:02:15] 2026-03-08 08:01:11,834 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043413323/log.48996069._001936.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/0/
[2026-03-08 09:02:15] 2026-03-08 08:01:11,848 | INFO     | adding to output.list: log.48996069._001936.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/6d/log.48996069._001936.job.log.tg
[2026-03-08 09:02:15] 2026-03-08 08:01:11,849 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 09:02:15] 2026-03-08 08:01:11,849 | INFO     | summary of transferred files:
[2026-03-08 09:02:15] 2026-03-08 08:01:11,849 | INFO     |  -- lfn=log.48996069._001936.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 09:02:15] 2026-03-08 08:01:11,849 | INFO     | stage-out finished correctly
[2026-03-08 09:02:15] 2026-03-08 08:01:11,898 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 09:02:15] 2026-03-08 08:01:11,908 | INFO     | monitor loop #398: job 0:7043413323 is in state 'finished'
[2026-03-08 09:02:15] 2026-03-08 08:01:11,908 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 09:02:15] 2026-03-08 08:01:11,950 | INFO     | job 7043413323 has state=finished
[2026-03-08 09:02:15] 2026-03-08 08:01:11,950 | INFO     | preparing for final server update for job 7043413323 in state='finished'
[2026-03-08 09:02:15] 2026-03-08 08:01:11,951 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043413323/jobReport.json
[2026-03-08 09:02:15] 2026-03-08 08:01:11,953 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/0/workernode_map.json
[2026-03-08 09:02:15] 2026-03-08 08:01:11,954 | INFO     | this job has now completed (state=finished)
[2026-03-08 09:02:15] 2026-03-08 08:01:11,954 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 09:02:15] 2026-03-08 08:01:11,954 | INFO     | log transfer has been attempted: DONE
[2026-03-08 09:02:15] 2026-03-08 08:01:11,954 | INFO     | job 7043413323 has finished - writing final server update
[2026-03-08 09:02:15] 2026-03-08 08:01:11,954 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_19568/.job.ad'
[2026-03-08 09:02:15] 2026-03-08 08:01:11,954 | INFO     | total number of processed events: 400 (read)
[2026-03-08 09:02:15] 2026-03-08 08:01:11,973 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043413323/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 09:02:15] 2026-03-08 08:01:11,974 | INFO     | extracted standard info from prmon json
[2026-03-08 09:02:15] 2026-03-08 08:01:11,974 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 09:02:15] 2026-03-08 08:01:11,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 09:02:15] 2026-03-08 08:01:11,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 09:02:15] 2026-03-08 08:01:11,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | fitting pss+swap vs Time
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | sum of square deviations: 177275882.0
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | sum of deviations: -72329713.0
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | mean x: 1772954226.0
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | mean y: 2333913.807228916
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | intersect: 725710770.7263057
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | chi2: 0.000552482403609733
[2026-03-08 09:02:15] 2026-03-08 08:01:11,976 | INFO     | current memory leak: -0.41 B/s (using 83 data points, chi2=0.00)
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | could have reported an average CPU frequency of 3609 MHz (7 samples)
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | ..............................
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . Timing measurements:
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . get job = 0 s
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . initial setup = 4 s
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . payload setup = 4 s
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . stage-in = 0 s
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . payload execution = 5450 s
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . stage-out = 0 s
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | . log creation = 0 s
[2026-03-08 09:02:15] 2026-03-08 08:01:11,977 | INFO     | ..............................
[2026-03-08 09:02:15] 2026-03-08 08:01:12,027 | INFO     | 
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | job summary report
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | --------------------------------------------------
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | PanDA job id: 7043413323
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | task id: 48996069
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | errors: (none)
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | pilot state: finished 
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | transexitcode: 0
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | exeerrorcode: 0
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | exeerrordiag: 
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | exitcode: 0
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | exitmsg: OK
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | cpuconsumptiontime: 20892 s
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | nevents: 400
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | neventsw: 0
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | pid: 1970317
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | pgrp: 1970317
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | corecount: 4
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | event service: False
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | sizes: {0: 2295302, 1: 2295763, 11: 2295763, 5459: 2322368, 5461: 2331584}
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | --------------------------------------------------
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | 
[2026-03-08 09:02:15] 2026-03-08 08:01:12,028 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/0
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 09:02:15] 2026-03-08 08:01:12,049 | INFO     | job 7043413323 has completed (purged errors)
[2026-03-08 09:02:15] 2026-03-08 08:01:12,050 | INFO     | overall cleanup function is called
[2026-03-08 09:02:15] 2026-03-08 08:01:13,056 | INFO     | --- collectZombieJob: --- 10, [1970317]
[2026-03-08 09:02:15] 2026-03-08 08:01:13,056 | INFO     | zombie collector waiting for pid 1970317
[2026-03-08 09:02:15] 2026-03-08 08:01:13,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 09:02:15] 2026-03-08 08:01:13,056 | INFO     | collected zombie processes
[2026-03-08 09:02:15] 2026-03-08 08:01:13,056 | INFO     | will attempt to kill all subprocesses of pid=1970317
[2026-03-08 09:02:15] 2026-03-08 08:01:13,498 | INFO     | process IDs to be killed: [1970317] (in reverse order)
[2026-03-08 09:02:15] 2026-03-08 08:01:13,717 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 09:02:15] 2026-03-08 08:01:13,718 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 09:02:15] 2026-03-08 08:01:13,746 | INFO     | did not find any defunct processes belonging to 1970317
[2026-03-08 09:02:15] 2026-03-08 08:01:13,774 | INFO     | did not find any defunct processes belonging to 1970317
[2026-03-08 09:02:15] 2026-03-08 08:01:13,774 | INFO     | ready for new job
[2026-03-08 09:02:15] 2026-03-08 08:01:13,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 09:02:15] 2026-03-08 08:01:13,775 | INFO     | **************************************
[2026-03-08 09:02:15] 2026-03-08 08:01:13,776 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 09:02:15] 2026-03-08 08:01:13,776 | INFO     | **************************************
[2026-03-08 09:02:15] 2026-03-08 08:01:13,776 | INFO     | 
[2026-03-08 09:02:15] 2026-03-08 08:01:13,781 | INFO     | architecture information:
[2026-03-08 09:02:15] 2026-03-08 08:01:13,782 | INFO     | executing command: cat /etc/os-release
[2026-03-08 09:02:15] 2026-03-08 08:01:13,797 | INFO     | cat /etc/os-release:
[2026-03-08 09:02:15] NAME="CentOS Linux"
[2026-03-08 09:02:15] VERSION="7 (Core)"
[2026-03-08 09:02:15] ID="centos"
[2026-03-08 09:02:15] ID_LIKE="rhel fedora"
[2026-03-08 09:02:15] VERSION_ID="7"
[2026-03-08 09:02:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 09:02:15] ANSI_COLOR="0;31"
[2026-03-08 09:02:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 09:02:15] HOME_URL="https://www.centos.org/"
[2026-03-08 09:02:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 09:02:15] 
[2026-03-08 09:02:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 09:02:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 09:02:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 09:02:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 09:02:15] 
[2026-03-08 09:02:15] 2026-03-08 08:01:13,797 | INFO     | **************************************
[2026-03-08 09:02:15] 2026-03-08 08:01:14,300 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/0
[2026-03-08 09:02:15] 2026-03-08 08:01:14,319 | INFO     | sufficient remaining disk space (20539506688 B)
[2026-03-08 09:02:15] 2026-03-08 08:01:14,319 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 09:02:15] 2026-03-08 08:01:14,319 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 09:02:15] 2026-03-08 08:01:14,319 | INFO     | update_server=False
[2026-03-08 09:02:15] 2026-03-08 08:01:14,319 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 09:02:15] 2026-03-08 08:01:14,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 09:02:15] 2026-03-08 08:01:14,411 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-08 09:02:15] 2026-03-08 08:01:14,411 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-08 09:02:15] 2026-03-08 08:01:14,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:02:15] 2026-03-08 08:01:14,411 | INFO     | will abort loop
[2026-03-08 09:02:15] 2026-03-08 08:01:14,790 | INFO     | all data control threads have been joined
[2026-03-08 09:02:15] 2026-03-08 08:01:14,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 09:02:15] 2026-03-08 08:01:14,924 | INFO     | all payload control threads have been joined
[2026-03-08 09:02:15] 2026-03-08 08:01:15,131 | INFO     | all job control threads have been joined
[2026-03-08 09:02:15] 2026-03-08 08:01:15,324 | INFO     | [job] retrieve thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:15,372 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:15,417 | INFO     | [job] job monitor thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:15,667 | INFO     | [data] copytool_in thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:15,795 | INFO     | [data] control thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:15,894 | INFO     | [payload] failed_post thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:15,903 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:15,929 | INFO     | [payload] control thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:16,136 | INFO     | [job] control thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:16,314 | INFO     | [payload] validate_post thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:16,559 | INFO     | [job] validate thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:16,738 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:16,907 | INFO     | [data] copytool_out thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:17,037 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 09:02:15] 2026-03-08 08:01:18,042 | INFO     | [job] queue monitor thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:18,326 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:24,890 | INFO     | job.realtimelogging is not enabled
[2026-03-08 09:02:15] 2026-03-08 08:01:25,895 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 09:02:15] 2026-03-08 08:01:45,230 | INFO     | PID=1956277 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 09:02:15] 2026-03-08 08:01:45,230 | INFO     | .. there are 52 such processes running
[2026-03-08 09:02:15] 2026-03-08 08:01:45,230 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 09:02:15] 2026-03-08 08:01:45,230 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 09:02:15] 2026-03-08 08:01:45,230 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 09:02:15] 2026-03-08 08:02:09,133 | INFO     | [monitor] cgroup control has ended
[2026-03-08 09:02:15] 2026-03-08 08:02:09,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22799426189120)>', '<ExcThread(monitor, started 22799191394048)>']
[2026-03-08 09:02:15] 2026-03-08 08:02:10,355 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 09:02:15] 2026-03-08 08:02:10,355 | INFO     | [monitor] control thread has ended
[2026-03-08 09:02:15] 2026-03-08 08:02:14,981 | INFO     | all workflow threads have been joined
[2026-03-08 09:02:15] 2026-03-08 08:02:14,981 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 09:02:15] 2026-03-08 08:02:14,981 | INFO     | traces error code: 0
[2026-03-08 09:02:15] 2026-03-08 08:02:14,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 09:02:15] 2026-03-08 08:02:15,097 [wrapper] ==== pilot stdout END ====
[2026-03-08 09:02:15] 2026-03-08 08:02:15,099 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 09:02:15] 2026-03-08 08:02:15,102 [wrapper] pilotpid: 1956277
[2026-03-08 09:02:15] 2026-03-08 08:02:15,104 [wrapper] Pilot exit status: 0
[2026-03-08 09:02:15] 2026-03-08 08:02:15,110 [wrapper] pandaids: 7043413323
[2026-03-08 09:02:15] 2026-03-08 08:02:15,232 [wrapper] cleanup supervisor_pilot 2840489 1956278
[2026-03-08 09:02:15] 2026-03-08 08:02:15,236 [wrapper] Test setup, not cleaning
[2026-03-08 09:02:15] 2026-03-08 08:02:15,238 [wrapper] apfmon messages muted
[2026-03-08 09:02:15] 2026-03-08 08:02:15,240 [wrapper] ==== wrapper stdout END ====
[2026-03-08 09:02:15] 2026-03-08 08:02:15,242 [wrapper] ==== wrapper stderr END ====
[2026-03-08 09:02:15]  *** Error codes and diagnostics ***
[2026-03-08 09:02:15]     "exeErrorCode": 0,
[2026-03-08 09:02:15]     "exeErrorDiag": "",
[2026-03-08 09:02:15]     "pilotErrorCode": 0,
[2026-03-08 09:02:15]     "pilotErrorDiag": "",
[2026-03-08 09:02:15]  *** Listing of results directory ***
[2026-03-08 09:02:15] total 733380
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc    584627 Mar  6 18:41 pilot3.tar.gz
[2026-03-08 09:02:15] -rwx------. 1 boinc boinc     36322 Mar  6 19:12 runpilot2-wrapper.sh
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc      5111 Mar  6 19:12 queuedata.json
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc       100 Mar  8 07:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 09:02:15] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 07:29 run_atlas
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc       105 Mar  8 07:29 job.xml
[2026-03-08 09:02:15] drwxrwx--x. 2 boinc boinc      4096 Mar  8 07:29 shared
[2026-03-08 09:02:15] -rw-r--r--. 2 boinc boinc    597940 Mar  8 07:29 input.tar.gz
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc      6707 Mar  8 07:29 init_data.xml
[2026-03-08 09:02:15] -rw-r--r--. 2 boinc boinc 543660498 Mar  8 07:29 EVNT.48329618._000039.pool.root.1
[2026-03-08 09:02:15] -rw-r--r--. 2 boinc boinc     15845 Mar  8 07:29 start_atlas.sh
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc         0 Mar  8 07:29 boinc_lockfile
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc      2501 Mar  8 07:29 pandaJob.out
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc    999169 Mar  8 07:29 agis_schedconf.cvmfs.json
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc   1521291 Mar  8 07:29 agis_ddmendpoints.agis.ALL.json
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc       445 Mar  8 07:29 workernode_map.json
[2026-03-08 09:02:15] drwx------. 5 boinc boinc      4096 Mar  8 07:30 pilot3
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc 201175434 Mar  8 09:00 HITS.48996069._001936.pool.root.1
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc       530 Mar  8 09:00 boinc_task_state.xml
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc        95 Mar  8 09:00 pilot_heartbeat.json
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc      1031 Mar  8 09:01 memory_monitor_summary.json
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc    304070 Mar  8 09:01 log.48996069._001936.job.log.tgz.1
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc      6352 Mar  8 09:01 heartbeat.json
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc        27 Mar  8 09:01 wrapper_checkpoint.txt
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc      8192 Mar  8 09:01 boinc_mmap_file
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc      5088 Mar  8 09:02 pilotlog.txt
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc    799267 Mar  8 09:02 log.48996069._001936.job.log.1
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc       357 Mar  8 09:02 output.list
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc       620 Mar  8 09:02 runtime_log
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc   1116160 Mar  8 09:02 result.tar.gz
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc      9221 Mar  8 09:02 runtime_log.err
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc       662 Mar  8 09:02 GXDMDmypoI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmQ2QLDmZs8ran.diag
[2026-03-08 09:02:15] -rw-r--r--. 1 boinc boinc     21201 Mar  8 09:02 stderr.txt
[2026-03-08 09:02:15] HITS file was successfully produced:
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc 201175434 Mar  8 09:00 shared/HITS.pool.root.1
[2026-03-08 09:02:15]  *** Contents of shared directory: ***
[2026-03-08 09:02:15] total 729084
[2026-03-08 09:02:15] -rw-r--r--. 2 boinc boinc    597940 Mar  8 07:29 input.tar.gz
[2026-03-08 09:02:15] -rw-r--r--. 2 boinc boinc 543660498 Mar  8 07:29 ATLAS.root_0
[2026-03-08 09:02:15] -rw-r--r--. 2 boinc boinc     15845 Mar  8 07:29 start_atlas.sh
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc 201175434 Mar  8 09:00 HITS.pool.root.1
[2026-03-08 09:02:15] -rw-------. 1 boinc boinc   1116160 Mar  8 09:02 result.tar.gz
09:02:16 (1948186): run_atlas exited; CPU time 21136.119461
09:02:16 (1948186): called boinc_finish(0)

</stderr_txt>
]]>

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