Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:05:22 (3899619): wrapper (7.7.26015): starting
05:05:22 (3899619): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 05:05:22] Arguments: --nthreads 12
[2026-03-07 05:05:22] Threads: 12
[2026-03-07 05:05:22] Checking for CVMFS
[2026-03-07 05:05:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 05:05:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 05:05:22] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 05:05:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 05:05:23] 2.13.3.0 8275 34237 206344 156985 2 188 45703429 46080001 6454 130560 0 123999599 99.877 42562166 26745 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-03-07 05:05:23] CVMFS is ok
[2026-03-07 05:05:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 05:05:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 05:05:23] Further information can be found at the LHC@home message board.
[2026-03-07 05:05:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 05:05:23] Checking for apptainer binary...
[2026-03-07 05:05:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 05:05:23] Running /usr/bin/apptainer --version
[2026-03-07 05:05:23] apptainer version 1.4.5-2.el9
[2026-03-07 05:05:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 05:05:23] mff2101.farm.particle.cz
[2026-03-07 05:05:23] apptainer works
[2026-03-07 05:05:23] Set ATHENA_PROC_NUMBER=12
[2026-03-07 05:05:23] Set ATHENA_CORE_NUMBER=12
[2026-03-07 05:05:23] Starting ATLAS job with PandaID=7043412977
[2026-03-07 05:05:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 06:08:52]  *** The last 200 lines of the pilot log: ***
[2026-03-07 06:08:52]  guid=090f1a22-1c47-4226-852a-095bc6e74ef0
[2026-03-07 06:08:52]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-07 06:08:52]  is_altstaged=None
[2026-03-07 06:08:52]  is_tar=False
[2026-03-07 06:08:52]  lfn=log.48996069._001698.job.log.tgz.1
[2026-03-07 06:08:52]  mtime=0
[2026-03-07 06:08:52]  protocol_id=None
[2026-03-07 06:08:52]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 06:08:52]  replicas=None
[2026-03-07 06:08:52]  scope=mc23_13p6TeV
[2026-03-07 06:08:52]  status=None
[2026-03-07 06:08:52]  status_code=0
[2026-03-07 06:08:52]  storage_token=
[2026-03-07 06:08:52]  surl=/scratch/.boinc/slots/4/PanDA_Pilot-7043412977/log.48996069._001698.job.log.tgz.1
[2026-03-07 06:08:52]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/e9/log.48996069._001698.job.log.tgz.1
[2026-03-07 06:08:52]  workdir=None
[2026-03-07 06:08:52] ]
[2026-03-07 06:08:52] 2026-03-07 05:08:16,861 | INFO     | transferring file log.48996069._001698.job.log.tgz.1 from /scratch/.boinc/slots/4/PanDA_Pilot-7043412977/log.48996069._001698.job.log.tgz.1 to /scratch/.boinc/slot
[2026-03-07 06:08:52] 2026-03-07 05:08:16,862 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/4/PanDA_Pilot-7043412977/log.48996069._001698.job.log.tgz.1 /scratch/.boinc/slots/4/log.48996069._001698.j
[2026-03-07 06:08:52] 2026-03-07 05:08:16,886 | INFO     | adding to output.list: log.48996069._001698.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/e9/log.48996069._001698.job.log.tg
[2026-03-07 06:08:52] 2026-03-07 05:08:16,887 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 06:08:52] 2026-03-07 05:08:16,887 | INFO     | summary of transferred files:
[2026-03-07 06:08:52] 2026-03-07 05:08:16,888 | INFO     |  -- lfn=log.48996069._001698.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 06:08:52] 2026-03-07 05:08:16,888 | INFO     | stage-out finished correctly
[2026-03-07 06:08:52] 2026-03-07 05:08:16,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 06:08:52] 2026-03-07 05:08:17,420 | WARNING  | process 3908718 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 06:08:52] 2026-03-07 05:08:17,421 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-7043412977/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:08:52] 2026-03-07 05:08:17,516 | INFO     | time since job start (3756s) is within the limit (349056.0s)
[2026-03-07 06:08:52] 2026-03-07 05:08:17,762 | INFO     | number of running child processes to parent process 3908718: 1
[2026-03-07 06:08:52] 2026-03-07 05:08:17,763 | INFO     | maximum number of monitored processes: 6
[2026-03-07 06:08:52] 2026-03-07 05:08:18,631 | INFO     | job 7043412977 has state=finished
[2026-03-07 06:08:52] 2026-03-07 05:08:18,632 | INFO     | preparing for final server update for job 7043412977 in state='finished'
[2026-03-07 06:08:52] 2026-03-07 05:08:18,632 | INFO     | reading metadata from: /scratch/.boinc/slots/4/PanDA_Pilot-7043412977/jobReport.json
[2026-03-07 06:08:52] 2026-03-07 05:08:18,634 | INFO     | added worker_node to metadata from /scratch/.boinc/slots/4/workernode_map.json
[2026-03-07 06:08:52] 2026-03-07 05:08:18,635 | INFO     | this job has now completed (state=finished)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,635 | INFO     | log transfer has been attempted: DONE
[2026-03-07 06:08:52] 2026-03-07 05:08:18,635 | INFO     | job 7043412977 has finished - writing final server update
[2026-03-07 06:08:52] 2026-03-07 05:08:18,635 | INFO     | total number of processed events: 400 (read)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,653 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-7043412977/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,654 | INFO     | extracted standard info from prmon json
[2026-03-07 06:08:52] 2026-03-07 05:08:18,654 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 06:08:52] 2026-03-07 05:08:18,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 06:08:52] 2026-03-07 05:08:18,654 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 06:08:52] 2026-03-07 05:08:18,655 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 06:08:52] 2026-03-07 05:08:18,656 | INFO     | fitting pss+swap vs Time
[2026-03-07 06:08:52] 2026-03-07 05:08:18,656 | INFO     | sum of square deviations: 51573060.0
[2026-03-07 06:08:52] 2026-03-07 05:08:18,657 | INFO     | sum of deviations: -600844022.0
[2026-03-07 06:08:52] 2026-03-07 05:08:18,657 | INFO     | mean x: 1772858317.0
[2026-03-07 06:08:52] 2026-03-07 05:08:18,657 | INFO     | mean y: 2710203.2
[2026-03-07 06:08:52] 2026-03-07 05:08:18,657 | INFO     | intersect: 20657123992.53945
[2026-03-07 06:08:52] 2026-03-07 05:08:18,657 | INFO     | chi2: 0.0036863534465876348
[2026-03-07 06:08:52] 2026-03-07 05:08:18,657 | INFO     | current memory leak: -11.65 B/s (using 55 data points, chi2=0.00)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,657 | INFO     | could have reported an average CPU frequency of 2737 MHz (6 samples)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | ..............................
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . Timing measurements:
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . get job = 0 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . initial setup = 6 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . payload setup = 6 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . stage-in = 0 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . payload execution = 3732 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . stage-out = 1 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | . log creation = 0 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,658 | INFO     | ..............................
[2026-03-07 06:08:52] 2026-03-07 05:08:18,745 | INFO     | 
[2026-03-07 06:08:52] 2026-03-07 05:08:18,745 | INFO     | job summary report
[2026-03-07 06:08:52] 2026-03-07 05:08:18,745 | INFO     | --------------------------------------------------
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | PanDA job id: 7043412977
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | task id: 48996069
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | errors: (none)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | pilot state: finished 
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | transexitcode: 0
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | exeerrorcode: 0
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | exeerrordiag: 
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | exitcode: 0
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | exitmsg: OK
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | cpuconsumptiontime: 38996 s
[2026-03-07 06:08:52] 2026-03-07 05:08:18,746 | INFO     | nevents: 400
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | neventsw: 0
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | pid: 3908718
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | pgrp: 3908718
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | corecount: 12
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | event service: False
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | sizes: {0: 2295291, 1: 2295752, 11: 2295752, 3743: 2321481, 3745: 2330537, 3746: 2330675}
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | --------------------------------------------------
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | 
[2026-03-07 06:08:52] 2026-03-07 05:08:18,747 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2026-03-07 06:08:52] 2026-03-07 05:08:18,773 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,773 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,773 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,773 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,774 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,775 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 06:08:52] 2026-03-07 05:08:18,775 | INFO     | job 7043412977 has completed (purged errors)
[2026-03-07 06:08:52] 2026-03-07 05:08:18,775 | INFO     | overall cleanup function is called
[2026-03-07 06:08:52] 2026-03-07 05:08:19,786 | INFO     | --- collectZombieJob: --- 10, [3908718]
[2026-03-07 06:08:52] 2026-03-07 05:08:19,787 | INFO     | zombie collector waiting for pid 3908718
[2026-03-07 06:08:52] 2026-03-07 05:08:19,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 06:08:52] 2026-03-07 05:08:19,787 | INFO     | collected zombie processes
[2026-03-07 06:08:52] 2026-03-07 05:08:19,787 | INFO     | will attempt to kill all subprocesses of pid=3908718
[2026-03-07 06:08:52] 2026-03-07 05:08:20,134 | INFO     | process IDs to be killed: [3908718] (in reverse order)
[2026-03-07 06:08:52] 2026-03-07 05:08:20,249 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 06:08:52] 2026-03-07 05:08:20,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 06:08:52] 2026-03-07 05:08:20,263 | INFO     | did not find any defunct processes belonging to 3908718
[2026-03-07 06:08:52] 2026-03-07 05:08:20,274 | INFO     | did not find any defunct processes belonging to 3908718
[2026-03-07 06:08:52] 2026-03-07 05:08:20,274 | INFO     | ready for new job
[2026-03-07 06:08:52] 2026-03-07 05:08:20,274 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 06:08:52] 2026-03-07 05:08:20,276 | INFO     | **************************************
[2026-03-07 06:08:52] 2026-03-07 05:08:20,276 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 06:08:52] 2026-03-07 05:08:20,277 | INFO     | **************************************
[2026-03-07 06:08:52] 2026-03-07 05:08:20,277 | INFO     | 
[2026-03-07 06:08:52] 2026-03-07 05:08:20,283 | INFO     | architecture information:
[2026-03-07 06:08:52] 2026-03-07 05:08:20,283 | INFO     | executing command: cat /etc/os-release
[2026-03-07 06:08:52] 2026-03-07 05:08:20,307 | INFO     | cat /etc/os-release:
[2026-03-07 06:08:52] NAME="CentOS Linux"
[2026-03-07 06:08:52] VERSION="7 (Core)"
[2026-03-07 06:08:52] ID="centos"
[2026-03-07 06:08:52] ID_LIKE="rhel fedora"
[2026-03-07 06:08:52] VERSION_ID="7"
[2026-03-07 06:08:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 06:08:52] ANSI_COLOR="0;31"
[2026-03-07 06:08:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 06:08:52] HOME_URL="https://www.centos.org/"
[2026-03-07 06:08:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 06:08:52] 
[2026-03-07 06:08:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 06:08:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 06:08:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 06:08:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 06:08:52] 
[2026-03-07 06:08:52] 2026-03-07 05:08:20,308 | INFO     | **************************************
[2026-03-07 06:08:52] 2026-03-07 05:08:20,811 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2026-03-07 06:08:52] 2026-03-07 05:08:20,836 | INFO     | sufficient remaining disk space (1674767761408 B)
[2026-03-07 06:08:52] 2026-03-07 05:08:20,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 06:08:52] 2026-03-07 05:08:20,836 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 06:08:52] 2026-03-07 05:08:20,836 | INFO     | update_server=False
[2026-03-07 06:08:52] 2026-03-07 05:08:20,837 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 06:08:52] 2026-03-07 05:08:20,837 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 06:08:52] 2026-03-07 05:08:21,272 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:08:52] 2026-03-07 05:08:21,272 | INFO     | aborting loop
[2026-03-07 06:08:52] 2026-03-07 05:08:21,522 | INFO     | all job control threads have been joined
[2026-03-07 06:08:52] 2026-03-07 05:08:21,592 | INFO     | all data control threads have been joined
[2026-03-07 06:08:52] 2026-03-07 05:08:21,842 | INFO     | [job] retrieve thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,114 | INFO     | all payload control threads have been joined
[2026-03-07 06:08:52] 2026-03-07 05:08:22,278 | INFO     | [job] job monitor thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,285 | INFO     | [payload] failed_post thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,301 | INFO     | [job] validate thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,525 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,528 | INFO     | [job] control thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,533 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,597 | INFO     | [data] control thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,843 | INFO     | [data] copytool_out thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:22,866 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:23,014 | INFO     | [payload] validate_post thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:23,056 | INFO     | [data] copytool_in thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:23,073 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 06:08:52] 2026-03-07 05:08:23,119 | INFO     | [payload] control thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:23,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 06:08:52] 2026-03-07 05:08:24,761 | INFO     | [job] queue monitor thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:27,079 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:31,448 | INFO     | job.realtimelogging is not enabled
[2026-03-07 06:08:52] 2026-03-07 05:08:32,453 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 06:08:52] 2026-03-07 05:08:46,427 | INFO     | [monitor] cgroup control has ended
[2026-03-07 06:08:52] 2026-03-07 05:08:47,119 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139979433469760)>', '<ExcThread(monitor, started 139979057510144)>']
[2026-03-07 06:08:52] 2026-03-07 05:08:51,015 | INFO     | PID=3903842 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 06:08:52] 2026-03-07 05:08:51,015 | INFO     | .. there are 8 such processes running
[2026-03-07 06:08:52] 2026-03-07 05:08:51,016 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 06:08:52] 2026-03-07 05:08:51,016 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 06:08:52] 2026-03-07 05:08:51,016 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 06:08:52] 2026-03-07 05:08:51,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 06:08:52] 2026-03-07 05:08:51,016 | INFO     | [monitor] control thread has ended
[2026-03-07 06:08:52] 2026-03-07 05:08:52,143 | INFO     | all workflow threads have been joined
[2026-03-07 06:08:52] 2026-03-07 05:08:52,143 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 06:08:52] 2026-03-07 05:08:52,144 | INFO     | traces error code: 0
[2026-03-07 06:08:52] 2026-03-07 05:08:52,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 06:08:52] 2026-03-07 05:08:52,271 [wrapper] ==== pilot stdout END ====
[2026-03-07 06:08:52] 2026-03-07 05:08:52,275 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 06:08:52] 2026-03-07 05:08:52,278 [wrapper] pilotpid: 3903842
[2026-03-07 06:08:52] 2026-03-07 05:08:52,282 [wrapper] Pilot exit status: 0
[2026-03-07 06:08:52] 2026-03-07 05:08:52,296 [wrapper] pandaids: 7043412977
[2026-03-07 06:08:52] 2026-03-07 05:08:52,378 [wrapper] cleanup supervisor_pilot 4035307 3903843
[2026-03-07 06:08:52] 2026-03-07 05:08:52,383 [wrapper] Test setup, not cleaning
[2026-03-07 06:08:52] 2026-03-07 05:08:52,386 [wrapper] apfmon messages muted
[2026-03-07 06:08:52] 2026-03-07 05:08:52,389 [wrapper] ==== wrapper stdout END ====
[2026-03-07 06:08:52] 2026-03-07 05:08:52,393 [wrapper] ==== wrapper stderr END ====
[2026-03-07 06:08:52]  *** Error codes and diagnostics ***
[2026-03-07 06:08:52]     "exeErrorCode": 0,
[2026-03-07 06:08:52]     "exeErrorDiag": "",
[2026-03-07 06:08:52]     "pilotErrorCode": 0,
[2026-03-07 06:08:52]     "pilotErrorDiag": "",
[2026-03-07 06:08:52]  *** Listing of results directory ***
[2026-03-07 06:08:52] total 725336
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc    584627 Mar  6 18:41 pilot3.tar.gz
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc      5111 Mar  6 19:11 queuedata.json
[2026-03-07 06:08:52] -rwx------ 1 boinc boinc     36322 Mar  6 19:12 runpilot2-wrapper.sh
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc       100 Mar  7 05:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 06:08:52] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 05:05 run_atlas
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc       105 Mar  7 05:05 job.xml
[2026-03-07 06:08:52] -rw-r--r-- 2 boinc boinc 535598146 Mar  7 05:05 EVNT.48329618._000034.pool.root.1
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc      6677 Mar  7 05:05 init_data.xml
[2026-03-07 06:08:52] -rw-r--r-- 2 boinc boinc     15845 Mar  7 05:05 start_atlas.sh
[2026-03-07 06:08:52] drwxrwx--x 2 boinc boinc      4096 Mar  7 05:05 shared
[2026-03-07 06:08:52] -rw-r--r-- 2 boinc boinc    597941 Mar  7 05:05 input.tar.gz
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc         0 Mar  7 05:05 boinc_lockfile
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc      2501 Mar  7 05:05 pandaJob.out
[2026-03-07 06:08:52] -rw------- 1 boinc boinc    999155 Mar  7 05:05 agis_schedconf.cvmfs.json
[2026-03-07 06:08:52] -rw------- 1 boinc boinc   1521291 Mar  7 05:05 agis_ddmendpoints.agis.ALL.json
[2026-03-07 06:08:52] -rw------- 1 boinc boinc       435 Mar  7 05:05 workernode_map.json
[2026-03-07 06:08:52] drwx------ 5 boinc boinc      4096 Mar  7 05:05 pilot3
[2026-03-07 06:08:52] -rw------- 1 boinc boinc 201260998 Mar  7 06:07 HITS.48996069._001698.pool.root.1
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc       530 Mar  7 06:07 boinc_task_state.xml
[2026-03-07 06:08:52] -rw------- 1 boinc boinc      1021 Mar  7 06:08 memory_monitor_summary.json
[2026-03-07 06:08:52] -rw------- 1 boinc boinc    413669 Mar  7 06:08 log.48996069._001698.job.log.tgz.1
[2026-03-07 06:08:52] -rw------- 1 boinc boinc      6336 Mar  7 06:08 heartbeat.json
[2026-03-07 06:08:52] -rw------- 1 boinc boinc        95 Mar  7 06:08 pilot_heartbeat.json
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc      8192 Mar  7 06:08 boinc_mmap_file
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc        27 Mar  7 06:08 wrapper_checkpoint.txt
[2026-03-07 06:08:52] -rw------- 1 boinc boinc      4894 Mar  7 06:08 pilotlog.txt
[2026-03-07 06:08:52] -rw------- 1 boinc boinc    558903 Mar  7 06:08 log.48996069._001698.job.log.1
[2026-03-07 06:08:52] -rw------- 1 boinc boinc       357 Mar  7 06:08 output.list
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc       620 Mar  7 06:08 runtime_log
[2026-03-07 06:08:52] -rw------- 1 boinc boinc    993280 Mar  7 06:08 result.tar.gz
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc      8879 Mar  7 06:08 runtime_log.err
[2026-03-07 06:08:52] -rw------- 1 boinc boinc       662 Mar  7 06:08 CSYNDmopoI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4FTLDm9yKB8m.diag
[2026-03-07 06:08:52] -rw-r--r-- 1 boinc boinc     21387 Mar  7 06:08 stderr.txt
[2026-03-07 06:08:52] HITS file was successfully produced:
[2026-03-07 06:08:52] -rw------- 1 boinc boinc 201260998 Mar  7 06:07 shared/HITS.pool.root.1
[2026-03-07 06:08:52]  *** Contents of shared directory: ***
[2026-03-07 06:08:52] total 721172
[2026-03-07 06:08:52] -rw-r--r-- 2 boinc boinc 535598146 Mar  7 05:05 ATLAS.root_0
[2026-03-07 06:08:52] -rw-r--r-- 2 boinc boinc     15845 Mar  7 05:05 start_atlas.sh
[2026-03-07 06:08:52] -rw-r--r-- 2 boinc boinc    597941 Mar  7 05:05 input.tar.gz
[2026-03-07 06:08:52] -rw------- 1 boinc boinc 201260998 Mar  7 06:07 HITS.pool.root.1
[2026-03-07 06:08:52] -rw------- 1 boinc boinc    993280 Mar  7 06:08 result.tar.gz
06:08:54 (3899619): run_atlas exited; CPU time 39082.913399
06:08:54 (3899619): called boinc_finish(0)

</stderr_txt>
]]>

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