Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:19:43 (536361): wrapper (7.7.26015): starting
10:19:43 (536361): wrapper: running run_atlas (--nthreads 2)
[2026-03-07 10:19:43] Arguments: --nthreads 2
[2026-03-07 10:19:43] Threads: 2
[2026-03-07 10:19:43] Checking for CVMFS
[2026-03-07 10:19:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 10:19:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 10:19:44] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 10:19:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 10:19:44] 2.9.2.0 3393 5824 60584 156995 3 49 26796100 36864001 0 130560 0 1559729 99.975 213461 11846 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-07 10:19:44] CVMFS is ok
[2026-03-07 10:19:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 10:19:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 10:19:44] Further information can be found at the LHC@home message board.
[2026-03-07 10:19:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 10:19:44] Checking for apptainer binary...
[2026-03-07 10:19:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 10:19:44] Running /usr/bin/apptainer --version
[2026-03-07 10:19:44] apptainer version 1.4.1-1.1
[2026-03-07 10:19:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 10:19:44] thA337
[2026-03-07 10:19:44] apptainer works
[2026-03-07 10:19:44] Set ATHENA_PROC_NUMBER=2
[2026-03-07 10:19:44] Set ATHENA_CORE_NUMBER=2
[2026-03-07 10:19:44] Starting ATLAS job with PandaID=7043405367
[2026-03-07 10:19:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 12:41:22]  *** The last 200 lines of the pilot log: ***
[2026-03-07 12:41:22] 2026-03-07 11:40:19,744 | INFO     | all payload control threads have been joined
[2026-03-07 12:41:22] 2026-03-07 11:40:20,191 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 12:41:22] 2026-03-07 11:40:20,527 | INFO     | [job] retrieve thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:20,528 | INFO     | [job] job monitor thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:20,528 | INFO     | [job] queue monitor thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:20,563 | INFO     | [payload] validate_post thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:20,737 | INFO     | [data] control thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:20,750 | INFO     | [payload] control thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:20,930 | INFO     | job.realtimelogging is not enabled
[2026-03-07 12:41:22] 2026-03-07 11:40:20,981 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:21,052 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:21,140 | INFO     | all job control threads have been joined
[2026-03-07 12:41:22] 2026-03-07 11:40:21,198 | INFO     | [payload] failed_post thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:21,198 | INFO     | [job] validate thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:21,356 | INFO     | [data] copytool_in thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:21,841 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:21,936 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:22,146 | INFO     | [job] control thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:22,197 | INFO     | [data] copytool_out thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:23,528 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 12:41:22] 2026-03-07 11:40:49,250 | INFO     | PID=540383 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 12:41:22] 2026-03-07 11:40:49,250 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 12:41:22] 2026-03-07 11:40:49,250 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 12:41:22] 2026-03-07 11:40:49,250 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 12:41:22] 2026-03-07 11:41:15,180 | INFO     | [monitor] cgroup control has ended
[2026-03-07 12:41:22] 2026-03-07 11:41:17,158 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139923102811968)>', '<ExcThread(monitor, started 139922165978880)>']
[2026-03-07 12:41:22] 2026-03-07 11:41:17,397 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 12:41:22] 2026-03-07 11:41:17,398 | INFO     | [monitor] control thread has ended
[2026-03-07 12:41:22] 2026-03-07 11:41:22,174 | INFO     | all workflow threads have been joined
[2026-03-07 12:41:22] 2026-03-07 11:41:22,174 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 12:41:22] 2026-03-07 11:41:22,175 | INFO     | traces error code: 0
[2026-03-07 12:41:22] 2026-03-07 11:41:22,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 12:41:22] 2026-03-07 11:41:22,217 [wrapper] ==== pilot stdout END ====
[2026-03-07 12:41:22] 2026-03-07 11:41:22,220 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 12:41:22] 2026-03-07 11:41:22,222 [wrapper] pilotpid: 540383
[2026-03-07 12:41:22] 2026-03-07 11:41:22,225 [wrapper] Pilot exit status: 0
[2026-03-07 12:41:22] 2026-03-07 11:41:22,231 [wrapper] pandaids: 7043405367
[2026-03-07 12:41:22] 2026-03-07 11:41:22,245 [wrapper] cleanup supervisor_pilot  550429 540384
[2026-03-07 12:41:22] 2026-03-07 11:41:22,248 [wrapper] Test setup, not cleaning
[2026-03-07 12:41:22] 2026-03-07 11:41:22,250 [wrapper] apfmon messages muted
[2026-03-07 12:41:22] 2026-03-07 11:41:22,252 [wrapper] ==== wrapper stdout END ====
[2026-03-07 12:41:22] 2026-03-07 11:41:22,254 [wrapper] ==== wrapper stderr END ====
[2026-03-07 12:41:22]  *** Error codes and diagnostics ***
[2026-03-07 12:41:22]     "exeErrorCode": 0,
[2026-03-07 12:41:22]     "exeErrorDiag": "",
[2026-03-07 12:41:22]     "pilotErrorCode": 0,
[2026-03-07 12:41:22]     "pilotErrorDiag": "",
[2026-03-07 12:41:22]  *** Listing of results directory ***
[2026-03-07 12:41:22] total 722816
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc    584627 Mar  6 18:12 pilot3.tar.gz
[2026-03-07 12:41:22] -rwx------ 1 boinc boinc     36322 Mar  6 18:39 runpilot2-wrapper.sh
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc      5111 Mar  6 18:40 queuedata.json
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc       100 Mar  7 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 12:41:22] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 10:19 run_atlas
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc       105 Mar  7 10:19 job.xml
[2026-03-07 12:41:22] -rw-r--r-- 2 boinc boinc 533083939 Mar  7 10:19 EVNT.48329618._000023.pool.root.1
[2026-03-07 12:41:22] -rw-r--r-- 2 boinc boinc    597940 Mar  7 10:19 input.tar.gz
[2026-03-07 12:41:22] -rw-r--r-- 2 boinc boinc     15845 Mar  7 10:19 start_atlas.sh
[2026-03-07 12:41:22] drwxrwx--x 2 boinc boinc      4096 Mar  7 10:19 shared
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc         0 Mar  7 10:19 boinc_setup_complete
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc      6205 Mar  7 10:19 init_data.xml
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc         0 Mar  7 10:19 boinc_lockfile
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc      2501 Mar  7 10:19 pandaJob.out
[2026-03-07 12:41:22] -rw------- 1 boinc boinc    999153 Mar  7 10:19 agis_schedconf.cvmfs.json
[2026-03-07 12:41:22] -rw------- 1 boinc boinc   1521291 Mar  7 10:19 agis_ddmendpoints.agis.ALL.json
[2026-03-07 12:41:22] -rw------- 1 boinc boinc       418 Mar  7 10:20 workernode_map.json
[2026-03-07 12:41:22] drwx------ 5 boinc boinc      4096 Mar  7 10:20 pilot3
[2026-03-07 12:41:22] -rw------- 1 boinc boinc 200123427 Mar  7 12:39 HITS.48996069._001141.pool.root.1
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc       530 Mar  7 12:40 boinc_task_state.xml
[2026-03-07 12:41:22] -rw------- 1 boinc boinc      1012 Mar  7 12:40 memory_monitor_summary.json
[2026-03-07 12:41:22] -rw------- 1 boinc boinc    318104 Mar  7 12:40 log.48996069._001141.job.log.tgz.1
[2026-03-07 12:41:22] -rw------- 1 boinc boinc      6292 Mar  7 12:40 heartbeat.json
[2026-03-07 12:41:22] -rw------- 1 boinc boinc        95 Mar  7 12:40 pilot_heartbeat.json
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc      8192 Mar  7 12:40 boinc_mmap_file
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc        27 Mar  7 12:40 wrapper_checkpoint.txt
[2026-03-07 12:41:22] -rw------- 1 boinc boinc      4819 Mar  7 12:41 pilotlog.txt
[2026-03-07 12:41:22] -rw------- 1 boinc boinc   1199844 Mar  7 12:41 log.48996069._001141.job.log.1
[2026-03-07 12:41:22] -rw------- 1 boinc boinc       357 Mar  7 12:41 output.list
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc       620 Mar  7 12:41 runtime_log
[2026-03-07 12:41:22] -rw------- 1 boinc boinc   1536000 Mar  7 12:41 result.tar.gz
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc      8896 Mar  7 12:41 runtime_log.err
[2026-03-07 12:41:22] -rw------- 1 boinc boinc       657 Mar  7 12:41 PTxNDmgKoI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmI8SLDmGQb1rm.diag
[2026-03-07 12:41:22] -rw-r--r-- 1 boinc boinc      6720 Mar  7 12:41 stderr.txt
[2026-03-07 12:41:22] HITS file was successfully produced:
[2026-03-07 12:41:22] -rw------- 1 boinc boinc 200123427 Mar  7 12:39 shared/HITS.pool.root.1
[2026-03-07 12:41:22]  *** Contents of shared directory: ***
[2026-03-07 12:41:22] total 718136
[2026-03-07 12:41:22] -rw-r--r-- 2 boinc boinc 533083939 Mar  7 10:19 ATLAS.root_0
[2026-03-07 12:41:22] -rw-r--r-- 2 boinc boinc    597940 Mar  7 10:19 input.tar.gz
[2026-03-07 12:41:22] -rw-r--r-- 2 boinc boinc     15845 Mar  7 10:19 start_atlas.sh
[2026-03-07 12:41:22] -rw------- 1 boinc boinc 200123427 Mar  7 12:39 HITS.pool.root.1
[2026-03-07 12:41:22] -rw------- 1 boinc boinc   1536000 Mar  7 12:41 result.tar.gz
12:41:44 (536361): run_atlas exited; CPU time 16375.445864
12:41:44 (536361): called boinc_finish(0)

</stderr_txt>
]]>

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