Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:00:18 (4158848): wrapper (7.7.26015): starting
22:00:18 (4158848): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 22:00:18] Arguments: --nthreads 4
[2026-03-07 22:00:18] Threads: 4
[2026-03-07 22:00:18] Checking for CVMFS
[2026-03-07 22:00:18] No cvmfs_config command found, will try listing directly
[2026-03-07 22:00:18] CVMFS is ok
[2026-03-07 22:00:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 22:00:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 22:00:18] Further information can be found at the LHC@home message board.
[2026-03-07 22:00:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 22:00:18] Checking for apptainer binary...
[2026-03-07 22:00:18] which: no apptainer in ((null))
[2026-03-07 22:00:18] apptainer is not installed, using version from CVMFS
[2026-03-07 22:00:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 22:00:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot224/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut24.grid.cesnet.cz
[2026-03-07 22:00:19] apptainer works
[2026-03-07 22:00:19] Set ATHENA_PROC_NUMBER=4
[2026-03-07 22:00:19] Set ATHENA_CORE_NUMBER=4
[2026-03-07 22:00:19] Starting ATLAS job with PandaID=7043376712
[2026-03-07 22:00:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot224/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 23:38:49]  *** The last 200 lines of the pilot log: ***
[2026-03-07 23:38:49]  is_altstaged=None
[2026-03-07 23:38:49]  is_tar=False
[2026-03-07 23:38:49]  lfn=log.48996069._000635.job.log.tgz.1
[2026-03-07 23:38:49]  mtime=0
[2026-03-07 23:38:49]  protocol_id=None
[2026-03-07 23:38:49]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 23:38:49]  replicas=None
[2026-03-07 23:38:49]  scope=mc23_13p6TeV
[2026-03-07 23:38:49]  status=None
[2026-03-07 23:38:49]  status_code=0
[2026-03-07 23:38:49]  storage_token=
[2026-03-07 23:38:49]  surl=/var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043376712/log.48996069._000635.job.log.tgz.1
[2026-03-07 23:38:49]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/0e/log.48996069._000635.job.log.tgz.1
[2026-03-07 23:38:49]  workdir=None
[2026-03-07 23:38:49] ]
[2026-03-07 23:38:49] 2026-03-07 22:37:45,302 | INFO     | transferring file log.48996069._000635.job.log.tgz.1 from /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043376712/log.48996069._000635.job.log.tgz.1 to /var/lib/
[2026-03-07 23:38:49] 2026-03-07 22:37:45,302 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043376712/log.48996069._000635.job.log.tgz.1 /var/lib/boinc/var/slot224/slots/0/
[2026-03-07 23:38:49] 2026-03-07 22:37:45,319 | INFO     | adding to output.list: log.48996069._000635.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d9/0e/log.48996069._000635.job.log.tg
[2026-03-07 23:38:49] 2026-03-07 22:37:45,319 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 23:38:49] 2026-03-07 22:37:45,319 | INFO     | summary of transferred files:
[2026-03-07 23:38:49] 2026-03-07 22:37:45,319 | INFO     |  -- lfn=log.48996069._000635.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 23:38:49] 2026-03-07 22:37:45,320 | INFO     | stage-out finished correctly
[2026-03-07 23:38:49] 2026-03-07 22:37:46,879 | INFO     | time since job start (5834s) is within the limit (349056.0s)
[2026-03-07 23:38:49] 2026-03-07 22:37:48,199 | WARNING  | process 4169227 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 23:38:49] 2026-03-07 22:37:48,199 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043376712/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 23:38:49] 2026-03-07 22:37:48,451 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 23:38:49] 2026-03-07 22:37:48,872 | INFO     | number of running child processes to parent process 4169227: 1
[2026-03-07 23:38:49] 2026-03-07 22:37:48,872 | INFO     | maximum number of monitored processes: 6
[2026-03-07 23:38:49] 2026-03-07 22:37:48,884 | INFO     | time since job start (5836s) is within the limit (349056.0s)
[2026-03-07 23:38:49] 2026-03-07 22:37:49,539 | INFO     | job 7043376712 has state=finished
[2026-03-07 23:38:49] 2026-03-07 22:37:49,539 | INFO     | preparing for final server update for job 7043376712 in state='finished'
[2026-03-07 23:38:49] 2026-03-07 22:37:49,539 | INFO     | reading metadata from: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043376712/jobReport.json
[2026-03-07 23:38:49] 2026-03-07 22:37:49,541 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot224/slots/0/workernode_map.json
[2026-03-07 23:38:49] 2026-03-07 22:37:49,541 | INFO     | this job has now completed (state=finished)
[2026-03-07 23:38:49] 2026-03-07 22:37:49,541 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 23:38:49] 2026-03-07 22:37:49,541 | INFO     | log transfer has been attempted: DONE
[2026-03-07 23:38:49] 2026-03-07 22:37:49,541 | INFO     | job 7043376712 has finished - writing final server update
[2026-03-07 23:38:49] 2026-03-07 22:37:49,541 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4124258/.job.ad'
[2026-03-07 23:38:49] 2026-03-07 22:37:49,541 | INFO     | total number of processed events: 400 (read)
[2026-03-07 23:38:49] 2026-03-07 22:37:49,559 | INFO     | using path: /var/lib/boinc/var/slot224/slots/0/PanDA_Pilot-7043376712/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 23:38:49] 2026-03-07 22:37:49,559 | INFO     | extracted standard info from prmon json
[2026-03-07 23:38:49] 2026-03-07 22:37:49,559 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 23:38:49] 2026-03-07 22:37:49,559 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 23:38:49] 2026-03-07 22:37:49,559 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 23:38:49] 2026-03-07 22:37:49,559 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 23:38:49] 2026-03-07 22:37:49,560 | INFO     | fitting pss+swap vs Time
[2026-03-07 23:38:49] 2026-03-07 22:37:49,560 | INFO     | sum of square deviations: 218571540.0
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | sum of deviations: 643059011.0000001
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | mean x: 1772920244.0
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | mean y: 2332528.786516854
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | intersect: -5213773551.119947
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | chi2: 0.00025715271537711954
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | current memory leak: 2.94 B/s (using 89 data points, chi2=0.00)
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | could have reported an average CPU frequency of 3575 MHz (7 samples)
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | ..............................
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . Timing measurements:
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . get job = 0 s
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . initial setup = 5 s
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . payload setup = 5 s
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . stage-in = 0 s
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . payload execution = 5810 s
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . stage-out = 0 s
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | . log creation = 0 s
[2026-03-07 23:38:49] 2026-03-07 22:37:49,561 | INFO     | ..............................
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | 
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | job summary report
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | --------------------------------------------------
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | PanDA job id: 7043376712
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | task id: 48996069
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | errors: (none)
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | pilot state: finished 
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | transexitcode: 0
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | exeerrorcode: 0
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | exeerrordiag: 
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | exitcode: 0
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | exitmsg: OK
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | cpuconsumptiontime: 22195 s
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | nevents: 400
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | neventsw: 0
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | pid: 4169227
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | pgrp: 4169227
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | corecount: 4
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | event service: False
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | sizes: {0: 2295731, 11: 2295731, 5819: 2322530, 5821: 2331552, 5824: 2331608, 5825: 2331802}
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | --------------------------------------------------
[2026-03-07 23:38:49] 2026-03-07 22:37:50,092 | INFO     | 
[2026-03-07 23:38:49] 2026-03-07 22:37:50,093 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot224/slots/0
[2026-03-07 23:38:49] 2026-03-07 22:37:50,111 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | job 7043376712 has completed (purged errors)
[2026-03-07 23:38:49] 2026-03-07 22:37:50,112 | INFO     | overall cleanup function is called
[2026-03-07 23:38:49] 2026-03-07 22:37:51,119 | INFO     | --- collectZombieJob: --- 10, [4169227]
[2026-03-07 23:38:49] 2026-03-07 22:37:51,119 | INFO     | zombie collector waiting for pid 4169227
[2026-03-07 23:38:49] 2026-03-07 22:37:51,119 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 23:38:49] 2026-03-07 22:37:51,119 | INFO     | collected zombie processes
[2026-03-07 23:38:49] 2026-03-07 22:37:51,119 | INFO     | will attempt to kill all subprocesses of pid=4169227
[2026-03-07 23:38:49] 2026-03-07 22:37:51,613 | INFO     | process IDs to be killed: [4169227] (in reverse order)
[2026-03-07 23:38:49] 2026-03-07 22:37:51,856 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 23:38:49] 2026-03-07 22:37:51,856 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 23:38:49] 2026-03-07 22:37:51,887 | INFO     | did not find any defunct processes belonging to 4169227
[2026-03-07 23:38:49] 2026-03-07 22:37:51,921 | INFO     | did not find any defunct processes belonging to 4169227
[2026-03-07 23:38:49] 2026-03-07 22:37:51,921 | INFO     | ready for new job
[2026-03-07 23:38:49] 2026-03-07 22:37:51,921 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 23:38:49] 2026-03-07 22:37:51,922 | INFO     | **************************************
[2026-03-07 23:38:49] 2026-03-07 22:37:51,922 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 23:38:49] 2026-03-07 22:37:51,922 | INFO     | **************************************
[2026-03-07 23:38:49] 2026-03-07 22:37:51,922 | INFO     | 
[2026-03-07 23:38:49] 2026-03-07 22:37:51,928 | INFO     | architecture information:
[2026-03-07 23:38:49] 2026-03-07 22:37:51,928 | INFO     | executing command: cat /etc/os-release
[2026-03-07 23:38:49] 2026-03-07 22:37:51,946 | INFO     | cat /etc/os-release:
[2026-03-07 23:38:49] NAME="CentOS Linux"
[2026-03-07 23:38:49] VERSION="7 (Core)"
[2026-03-07 23:38:49] ID="centos"
[2026-03-07 23:38:49] ID_LIKE="rhel fedora"
[2026-03-07 23:38:49] VERSION_ID="7"
[2026-03-07 23:38:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 23:38:49] ANSI_COLOR="0;31"
[2026-03-07 23:38:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 23:38:49] HOME_URL="https://www.centos.org/"
[2026-03-07 23:38:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 23:38:49] 
[2026-03-07 23:38:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 23:38:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 23:38:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 23:38:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 23:38:49] 
[2026-03-07 23:38:49] 2026-03-07 22:37:51,946 | INFO     | **************************************
[2026-03-07 23:38:49] 2026-03-07 22:37:52,449 | INFO     | executing command: df -mP /var/lib/boinc/var/slot224/slots/0
[2026-03-07 23:38:49] 2026-03-07 22:37:52,464 | INFO     | sufficient remaining disk space (20241711104 B)
[2026-03-07 23:38:49] 2026-03-07 22:37:52,464 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 23:38:49] 2026-03-07 22:37:52,464 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 23:38:49] 2026-03-07 22:37:52,464 | INFO     | update_server=False
[2026-03-07 23:38:49] 2026-03-07 22:37:52,464 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 23:38:49] 2026-03-07 22:37:52,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:38:49] 2026-03-07 22:37:52,465 | INFO     | aborting loop
[2026-03-07 23:38:49] 2026-03-07 22:37:53,112 | INFO     | all data control threads have been joined
[2026-03-07 23:38:49] 2026-03-07 22:37:53,193 | INFO     | all payload control threads have been joined
[2026-03-07 23:38:49] 2026-03-07 22:37:53,339 | INFO     | all job control threads have been joined
[2026-03-07 23:38:49] 2026-03-07 22:37:53,378 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 23:38:49] 2026-03-07 22:37:53,469 | INFO     | [job] retrieve thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:53,470 | INFO     | [job] job monitor thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:53,542 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,013 | INFO     | [job] validate thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,117 | INFO     | [data] control thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,198 | INFO     | [payload] control thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,219 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,322 | INFO     | [payload] validate_post thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,325 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,344 | INFO     | [job] control thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 23:38:49] 2026-03-07 22:37:54,580 | INFO     | [data] copytool_in thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:54,619 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 23:38:49] 2026-03-07 22:37:54,895 | INFO     | [payload] failed_post thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:55,383 | INFO     | [data] copytool_out thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:55,624 | INFO     | [job] queue monitor thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:37:58,525 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:38:03,011 | INFO     | job.realtimelogging is not enabled
[2026-03-07 23:38:49] 2026-03-07 22:38:04,016 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 23:38:49] 2026-03-07 22:38:22,550 | INFO     | PID=4163385 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 23:38:49] 2026-03-07 22:38:22,550 | INFO     | .. there are 50 such processes running
[2026-03-07 23:38:49] 2026-03-07 22:38:22,550 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 23:38:49] 2026-03-07 22:38:22,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 23:38:49] 2026-03-07 22:38:22,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 23:38:49] 2026-03-07 22:38:42,261 | INFO     | [monitor] cgroup control has ended
[2026-03-07 23:38:49] 2026-03-07 22:38:43,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23080520460096)>', '<ExcThread(monitor, started 23080212621056)>']
[2026-03-07 23:38:49] 2026-03-07 22:38:44,663 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 23:38:49] 2026-03-07 22:38:44,663 | INFO     | [monitor] control thread has ended
[2026-03-07 23:38:49] 2026-03-07 22:38:48,766 | INFO     | all workflow threads have been joined
[2026-03-07 23:38:49] 2026-03-07 22:38:48,766 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 23:38:49] 2026-03-07 22:38:48,766 | INFO     | traces error code: 0
[2026-03-07 23:38:49] 2026-03-07 22:38:48,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 23:38:49] 2026-03-07 22:38:48,901 [wrapper] ==== pilot stdout END ====
[2026-03-07 23:38:49] 2026-03-07 22:38:48,904 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 23:38:49] 2026-03-07 22:38:48,905 [wrapper] pilotpid: 4163385
[2026-03-07 23:38:49] 2026-03-07 22:38:48,908 [wrapper] Pilot exit status: 0
[2026-03-07 23:38:49] 2026-03-07 22:38:48,940 [wrapper] pandaids: 7043376712
[2026-03-07 23:38:49] 2026-03-07 22:38:49,096 [wrapper] cleanup supervisor_pilot  723892 4163386
[2026-03-07 23:38:49] 2026-03-07 22:38:49,101 [wrapper] Test setup, not cleaning
[2026-03-07 23:38:49] 2026-03-07 22:38:49,103 [wrapper] apfmon messages muted
[2026-03-07 23:38:49] 2026-03-07 22:38:49,106 [wrapper] ==== wrapper stdout END ====
[2026-03-07 23:38:49] 2026-03-07 22:38:49,108 [wrapper] ==== wrapper stderr END ====
[2026-03-07 23:38:49]  *** Error codes and diagnostics ***
[2026-03-07 23:38:49]     "exeErrorCode": 0,
[2026-03-07 23:38:49]     "exeErrorDiag": "",
[2026-03-07 23:38:49]     "pilotErrorCode": 0,
[2026-03-07 23:38:49]     "pilotErrorDiag": "",
[2026-03-07 23:38:49]  *** Listing of results directory ***
[2026-03-07 23:38:49] total 729304
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc    584627 Mar  6 18:12 pilot3.tar.gz
[2026-03-07 23:38:49] -rwx------. 1 boinc boinc     36322 Mar  6 18:15 runpilot2-wrapper.sh
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc      5111 Mar  6 18:15 queuedata.json
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc       100 Mar  7 22:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 23:38:49] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 22:00 run_atlas
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc       105 Mar  7 22:00 job.xml
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc      6709 Mar  7 22:00 init_data.xml
[2026-03-07 23:38:49] -rw-r--r--. 2 boinc boinc 542289038 Mar  7 22:00 EVNT.48329618._000013.pool.root.1
[2026-03-07 23:38:49] -rw-r--r--. 2 boinc boinc     15845 Mar  7 22:00 start_atlas.sh
[2026-03-07 23:38:49] drwxrwx--x. 2 boinc boinc      4096 Mar  7 22:00 shared
[2026-03-07 23:38:49] -rw-r--r--. 2 boinc boinc    597937 Mar  7 22:00 input.tar.gz
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc         0 Mar  7 22:00 boinc_lockfile
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc      2499 Mar  7 22:00 pandaJob.out
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc    999169 Mar  7 22:00 agis_schedconf.cvmfs.json
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc   1521291 Mar  7 22:00 agis_ddmendpoints.agis.ALL.json
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc       445 Mar  7 22:00 workernode_map.json
[2026-03-07 23:38:49] drwx------. 5 boinc boinc      4096 Mar  7 22:00 pilot3
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc 198281457 Mar  7 23:37 HITS.48996069._000635.pool.root.1
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc       530 Mar  7 23:37 boinc_task_state.xml
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc      1029 Mar  7 23:37 memory_monitor_summary.json
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc    308098 Mar  7 23:37 log.48996069._000635.job.log.tgz.1
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc      6347 Mar  7 23:37 heartbeat.json
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc        95 Mar  7 23:38 pilot_heartbeat.json
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc      8192 Mar  7 23:38 boinc_mmap_file
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc        27 Mar  7 23:38 wrapper_checkpoint.txt
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc      4902 Mar  7 23:38 pilotlog.txt
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc    842313 Mar  7 23:38 log.48996069._000635.job.log.1
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc       357 Mar  7 23:38 output.list
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc       620 Mar  7 23:38 runtime_log
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc   1167360 Mar  7 23:38 result.tar.gz
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc       663 Mar  7 23:38 t7FLDmpwnI9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4sQLDm2jvqPo.diag
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc      9221 Mar  7 23:38 runtime_log.err
[2026-03-07 23:38:49] -rw-r--r--. 1 boinc boinc     21373 Mar  7 23:38 stderr.txt
[2026-03-07 23:38:49] HITS file was successfully produced:
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc 198281457 Mar  7 23:37 shared/HITS.pool.root.1
[2026-03-07 23:38:49]  *** Contents of shared directory: ***
[2026-03-07 23:38:49] total 724964
[2026-03-07 23:38:49] -rw-r--r--. 2 boinc boinc 542289038 Mar  7 22:00 ATLAS.root_0
[2026-03-07 23:38:49] -rw-r--r--. 2 boinc boinc     15845 Mar  7 22:00 start_atlas.sh
[2026-03-07 23:38:49] -rw-r--r--. 2 boinc boinc    597937 Mar  7 22:00 input.tar.gz
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc 198281457 Mar  7 23:37 HITS.pool.root.1
[2026-03-07 23:38:49] -rw-------. 1 boinc boinc   1167360 Mar  7 23:38 result.tar.gz
23:38:50 (4158848): run_atlas exited; CPU time 22470.301018
23:38:50 (4158848): called boinc_finish(0)

</stderr_txt>
]]>

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