Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:27:31 (3593543): wrapper (7.7.26015): starting
17:27:31 (3593543): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 17:27:31] Arguments: --nthreads 4
[2026-03-08 17:27:31] Threads: 4
[2026-03-08 17:27:31] Checking for CVMFS
[2026-03-08 17:27:31] No cvmfs_config command found, will try listing directly
[2026-03-08 17:27:31] CVMFS is ok
[2026-03-08 17:27:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 17:27:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 17:27:32] Further information can be found at the LHC@home message board.
[2026-03-08 17:27:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 17:27:32] Checking for apptainer binary...
[2026-03-08 17:27:32] which: no apptainer in ((null))
[2026-03-08 17:27:32] apptainer is not installed, using version from CVMFS
[2026-03-08 17:27:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 17:27:32] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2026-03-08 17:27:32] apptainer works
[2026-03-08 17:27:32] Set ATHENA_PROC_NUMBER=4
[2026-03-08 17:27:32] Set ATHENA_CORE_NUMBER=4
[2026-03-08 17:27:32] Starting ATLAS job with PandaID=7043371328
[2026-03-08 17:27:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 21:13:18]  *** The last 200 lines of the pilot log: ***
[2026-03-08 21:13:18] 2026-03-08 20:12:13,709 | INFO     | mean y: 2352807.65158371
[2026-03-08 21:13:18] 2026-03-08 20:12:13,709 | INFO     | intersect: 20959141081.84193
[2026-03-08 21:13:18] 2026-03-08 20:12:13,710 | INFO     | chi2: 2.2373321814528255
[2026-03-08 21:13:18] 2026-03-08 20:12:13,710 | INFO     | sum of square deviations: 3124858590.0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,711 | INFO     | sum of deviations: -24951369575.49999
[2026-03-08 21:13:18] 2026-03-08 20:12:13,712 | INFO     | mean x: 1772993851.5
[2026-03-08 21:13:18] 2026-03-08 20:12:13,712 | INFO     | mean y: 2362669.2916666665
[2026-03-08 21:13:18] 2026-03-08 20:12:13,712 | INFO     | intersect: 14159363240.592924
[2026-03-08 21:13:18] 2026-03-08 20:12:13,712 | INFO     | chi2: 1.4721851355378626
[2026-03-08 21:13:18] 2026-03-08 20:12:13,712 | INFO     | current chi2=1.4721851355378626 (change=34.19908104205206 %)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,716 | INFO     | sum of square deviations: 2912836010.0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,717 | INFO     | sum of deviations: -24162512847.999992
[2026-03-08 21:13:18] 2026-03-08 20:12:13,718 | INFO     | mean x: 1772993699.0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,718 | INFO     | mean y: 2363236.786729858
[2026-03-08 21:13:18] 2026-03-08 20:12:13,718 | INFO     | intersect: 14709673529.723724
[2026-03-08 21:13:18] 2026-03-08 20:12:13,718 | INFO     | chi2: 1.469915275476386
[2026-03-08 21:13:18] 2026-03-08 20:12:13,718 | INFO     | current chi2=1.469915275476386 (change=0.15418305800562684 %)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,718 | INFO     | right removable region: 210
[2026-03-08 21:13:18] 2026-03-08 20:12:13,719 | INFO     | sum of square deviations: 3124858590.0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,720 | INFO     | sum of deviations: -61489822740.99999
[2026-03-08 21:13:18] 2026-03-08 20:12:13,720 | INFO     | mean x: 1772994156.5
[2026-03-08 21:13:18] 2026-03-08 20:12:13,720 | INFO     | mean y: 2367617.1018518517
[2026-03-08 21:13:18] 2026-03-08 20:12:13,720 | INFO     | intersect: 34890697205.16612
[2026-03-08 21:13:18] 2026-03-08 20:12:13,721 | INFO     | chi2: 1.0362512189435096
[2026-03-08 21:13:18] 2026-03-08 20:12:13,721 | INFO     | current chi2=1.0362512189435096 (change=53.68362250657774 %)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,721 | INFO     | sum of square deviations: 2912836010.0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,723 | INFO     | sum of deviations: -52874956159.99999
[2026-03-08 21:13:18] 2026-03-08 20:12:13,723 | INFO     | mean x: 1772994309.0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,723 | INFO     | mean y: 2361401.1658767774
[2026-03-08 21:13:18] 2026-03-08 20:12:13,723 | INFO     | intersect: 32186458287.658463
[2026-03-08 21:13:18] 2026-03-08 20:12:13,723 | INFO     | chi2: 1.0126729329797366
[2026-03-08 21:13:18] 2026-03-08 20:12:13,723 | INFO     | current chi2=1.0126729329797366 (change=2.2753445817715687 %)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,723 | INFO     | left removable region: 20
[2026-03-08 21:13:18] 2026-03-08 20:12:13,724 | INFO     | sum of square deviations: 2126802667.5
[2026-03-08 21:13:18] 2026-03-08 20:12:13,725 | INFO     | sum of deviations: -16421931786.500002
[2026-03-08 21:13:18] 2026-03-08 20:12:13,725 | INFO     | mean x: 1772994278.5
[2026-03-08 21:13:18] 2026-03-08 20:12:13,725 | INFO     | mean y: 2354841.0789473685
[2026-03-08 21:13:18] 2026-03-08 20:12:13,725 | INFO     | intersect: 13692384266.143972
[2026-03-08 21:13:18] 2026-03-08 20:12:13,726 | INFO     | chi2: 0.0912936958101076
[2026-03-08 21:13:18] 2026-03-08 20:12:13,726 | INFO     | current memory leak: -7.72 B/s (using 190 data points, chi2=0.09)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,730 | INFO     | could have reported an average CPU frequency of 2498 MHz (11 samples)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,730 | INFO     | ..............................
[2026-03-08 21:13:18] 2026-03-08 20:12:13,730 | INFO     | . Timing measurements:
[2026-03-08 21:13:18] 2026-03-08 20:12:13,730 | INFO     | . get job = 0 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,730 | INFO     | . initial setup = 6 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,731 | INFO     | . payload setup = 7 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,731 | INFO     | . stage-in = 0 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,731 | INFO     | . payload execution = 13436 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,731 | INFO     | . stage-out = 1 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,731 | INFO     | . log creation = 0 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,731 | INFO     | ..............................
[2026-03-08 21:13:18] 2026-03-08 20:12:13,894 | INFO     | 
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | job summary report
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | --------------------------------------------------
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | PanDA job id: 7043371328
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | task id: 48996069
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | errors: (none)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | pilot state: finished 
[2026-03-08 21:13:18] 2026-03-08 20:12:13,895 | INFO     | transexitcode: 0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | exeerrorcode: 0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | exeerrordiag: 
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | exitcode: 0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | exitmsg: OK
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | cpuconsumptiontime: 47706 s
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | nevents: 400
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | neventsw: 0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | pid: 3602840
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | pgrp: 3602840
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | corecount: 4
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | event service: False
[2026-03-08 21:13:18] 2026-03-08 20:12:13,896 | INFO     | sizes: {0: 2295297, 1: 2295758, 11: 2295758, 13446: 2326439, 13447: 2326438, 13448: 2330802, 13450: 2330986, 13452: 2331180}
[2026-03-08 21:13:18] 2026-03-08 20:12:13,901 | INFO     | --------------------------------------------------
[2026-03-08 21:13:18] 2026-03-08 20:12:13,901 | INFO     | 
[2026-03-08 21:13:18] 2026-03-08 20:12:13,901 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot64/slots/0
[2026-03-08 21:13:18] 2026-03-08 20:12:13,959 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 21:13:18] 2026-03-08 20:12:13,961 | INFO     | job 7043371328 has completed (purged errors)
[2026-03-08 21:13:18] 2026-03-08 20:12:13,962 | INFO     | overall cleanup function is called
[2026-03-08 21:13:18] 2026-03-08 20:12:14,250 | WARNING  | process 3602840 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 21:13:18] 2026-03-08 20:12:14,596 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 21:13:18] 2026-03-08 20:12:14,597 | INFO     | using path: /var/lib/boinc/var/slot64/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 21:13:18] 2026-03-08 20:12:14,598 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-08 21:13:18] 2026-03-08 20:12:14,598 | WARNING  | maxPSS not found in memory monitor output
[2026-03-08 21:13:18] 2026-03-08 20:12:14,598 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7043371328/payload.stdout) since it has not been created yet
[2026-03-08 21:13:18] 2026-03-08 20:12:14,599 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-03-08 21:13:18] 2026-03-08 20:12:14,630 | INFO     | sufficient remaining disk space (20386414592 B)
[2026-03-08 21:13:18] 2026-03-08 20:12:14,630 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-08 21:13:18] 2026-03-08 20:12:14,630 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot64/slots/0/PanDA_Pilot-7043371328/HITS.48996069._000342.pool.root.1 since it does not exist
[2026-03-08 21:13:18] 2026-03-08 20:12:14,975 | INFO     | --- collectZombieJob: --- 10, [3602840]
[2026-03-08 21:13:18] 2026-03-08 20:12:14,975 | INFO     | zombie collector waiting for pid 3602840
[2026-03-08 21:13:18] 2026-03-08 20:12:14,975 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 21:13:18] 2026-03-08 20:12:14,975 | INFO     | collected zombie processes
[2026-03-08 21:13:18] 2026-03-08 20:12:14,975 | INFO     | will attempt to kill all subprocesses of pid=3602840
[2026-03-08 21:13:18] 2026-03-08 20:12:15,352 | INFO     | number of running child processes to parent process 3602840: 1
[2026-03-08 21:13:18] 2026-03-08 20:12:15,357 | INFO     | maximum number of monitored processes: 6
[2026-03-08 21:13:18] 2026-03-08 20:12:15,357 | INFO     | aborting job monitoring since job object (job id=7043371328) has expired
[2026-03-08 21:13:18] 2026-03-08 20:12:15,734 | INFO     | process IDs to be killed: [3602840] (in reverse order)
[2026-03-08 21:13:18] 2026-03-08 20:12:15,928 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 21:13:18] 2026-03-08 20:12:15,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 21:13:18] 2026-03-08 20:12:15,944 | INFO     | did not find any defunct processes belonging to 3602840
[2026-03-08 21:13:18] 2026-03-08 20:12:15,959 | INFO     | did not find any defunct processes belonging to 3602840
[2026-03-08 21:13:18] 2026-03-08 20:12:15,960 | INFO     | ready for new job
[2026-03-08 21:13:18] 2026-03-08 20:12:15,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 21:13:18] 2026-03-08 20:12:15,962 | INFO     | **************************************
[2026-03-08 21:13:18] 2026-03-08 20:12:15,962 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 21:13:18] 2026-03-08 20:12:15,962 | INFO     | **************************************
[2026-03-08 21:13:18] 2026-03-08 20:12:15,962 | INFO     | 
[2026-03-08 21:13:18] 2026-03-08 20:12:15,966 | INFO     | architecture information:
[2026-03-08 21:13:18] 2026-03-08 20:12:15,972 | INFO     | executing command: cat /etc/os-release
[2026-03-08 21:13:18] 2026-03-08 20:12:16,031 | INFO     | cat /etc/os-release:
[2026-03-08 21:13:18] NAME="CentOS Linux"
[2026-03-08 21:13:18] VERSION="7 (Core)"
[2026-03-08 21:13:18] ID="centos"
[2026-03-08 21:13:18] ID_LIKE="rhel fedora"
[2026-03-08 21:13:18] VERSION_ID="7"
[2026-03-08 21:13:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 21:13:18] ANSI_COLOR="0;31"
[2026-03-08 21:13:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 21:13:18] HOME_URL="https://www.centos.org/"
[2026-03-08 21:13:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 21:13:18] 
[2026-03-08 21:13:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 21:13:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 21:13:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 21:13:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 21:13:18] 
[2026-03-08 21:13:18] 2026-03-08 20:12:16,032 | INFO     | **************************************
[2026-03-08 21:13:18] 2026-03-08 20:12:16,534 | INFO     | executing command: df -mP /var/lib/boinc/var/slot64/slots/0
[2026-03-08 21:13:18] 2026-03-08 20:12:16,556 | INFO     | sufficient remaining disk space (20388511744 B)
[2026-03-08 21:13:18] 2026-03-08 20:12:16,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 21:13:18] 2026-03-08 20:12:16,556 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 21:13:18] 2026-03-08 20:12:16,556 | INFO     | update_server=False
[2026-03-08 21:13:18] 2026-03-08 20:12:16,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 21:13:18] 2026-03-08 20:12:16,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 21:13:18] 2026-03-08 20:12:16,557 | INFO     | aborting loop
[2026-03-08 21:13:18] 2026-03-08 20:12:16,557 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 21:13:18] 2026-03-08 20:12:17,188 | INFO     | all data control threads have been joined
[2026-03-08 21:13:18] 2026-03-08 20:12:17,388 | INFO     | all payload control threads have been joined
[2026-03-08 21:13:18] 2026-03-08 20:12:17,562 | INFO     | [job] job monitor thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:17,562 | INFO     | [job] retrieve thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:17,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 21:13:18] 2026-03-08 20:12:17,821 | INFO     | [payload] validate_post thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,053 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,193 | INFO     | [data] control thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,227 | INFO     | all job control threads have been joined
[2026-03-08 21:13:18] 2026-03-08 20:12:18,394 | INFO     | [payload] control thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,470 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,563 | INFO     | [data] copytool_out thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,642 | INFO     | [data] copytool_in thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,647 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 21:13:18] 2026-03-08 20:12:18,933 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:18,967 | INFO     | [job] validate thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:19,052 | INFO     | [payload] failed_post thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:19,232 | INFO     | [job] control thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:19,909 | INFO     | [job] queue monitor thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:21,812 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 21:13:18] 2026-03-08 20:12:44,818 [wrapper] supervise_pilot (15 min periods counter: 16)
[2026-03-08 21:13:18] 2026-03-08 20:12:46,362 | INFO     | PID=3598015 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 21:13:18] 2026-03-08 20:12:46,362 | INFO     | .. there are 13 such processes running
[2026-03-08 21:13:18] 2026-03-08 20:12:46,363 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 21:13:18] 2026-03-08 20:12:46,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 21:13:18] 2026-03-08 20:12:46,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 21:13:18] 2026-03-08 20:13:12,497 | INFO     | [monitor] cgroup control has ended
[2026-03-08 21:13:18] 2026-03-08 20:13:12,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22882969925440)>', '<ExcThread(monitor, started 22882725136128)>']
[2026-03-08 21:13:18] 2026-03-08 20:13:13,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 21:13:18] 2026-03-08 20:13:13,504 | INFO     | [monitor] control thread has ended
[2026-03-08 21:13:18] 2026-03-08 20:13:18,006 | INFO     | all workflow threads have been joined
[2026-03-08 21:13:18] 2026-03-08 20:13:18,006 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 21:13:18] 2026-03-08 20:13:18,006 | INFO     | traces error code: 0
[2026-03-08 21:13:18] 2026-03-08 20:13:18,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 21:13:18] 2026-03-08 20:13:18,150 [wrapper] ==== pilot stdout END ====
[2026-03-08 21:13:18] 2026-03-08 20:13:18,153 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 21:13:18] 2026-03-08 20:13:18,162 [wrapper] pilotpid: 3598015
[2026-03-08 21:13:18] 2026-03-08 20:13:18,168 [wrapper] Pilot exit status: 0
[2026-03-08 21:13:18] 2026-03-08 20:13:18,224 [wrapper] pandaids: 7043371328
[2026-03-08 21:13:18] 2026-03-08 20:13:18,333 [wrapper] cleanup supervisor_pilot 3892057 3598016
[2026-03-08 21:13:18] 2026-03-08 20:13:18,336 [wrapper] Test setup, not cleaning
[2026-03-08 21:13:18] 2026-03-08 20:13:18,344 [wrapper] apfmon messages muted
[2026-03-08 21:13:18] 2026-03-08 20:13:18,351 [wrapper] ==== wrapper stdout END ====
[2026-03-08 21:13:18] 2026-03-08 20:13:18,354 [wrapper] ==== wrapper stderr END ====
[2026-03-08 21:13:18]  *** Error codes and diagnostics ***
[2026-03-08 21:13:18]     "exeErrorCode": 0,
[2026-03-08 21:13:18]     "exeErrorDiag": "",
[2026-03-08 21:13:18]     "pilotErrorCode": 0,
[2026-03-08 21:13:18]     "pilotErrorDiag": "",
[2026-03-08 21:13:18]  *** Listing of results directory ***
[2026-03-08 21:13:18] total 730908
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc    584627 Mar  6 18:12 pilot3.tar.gz
[2026-03-08 21:13:18] -rwx------. 1 boinc boinc     36322 Mar  6 18:15 runpilot2-wrapper.sh
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc      5111 Mar  6 18:15 queuedata.json
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc       100 Mar  8 17:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 21:13:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 17:27 run_atlas
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc       105 Mar  8 17:27 job.xml
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc      6560 Mar  8 17:27 init_data.xml
[2026-03-08 21:13:18] -rw-r--r--. 2 boinc boinc 536391036 Mar  8 17:27 EVNT.48329618._000007.pool.root.1
[2026-03-08 21:13:18] -rw-r--r--. 2 boinc boinc     15845 Mar  8 17:27 start_atlas.sh
[2026-03-08 21:13:18] drwxrwx--x. 2 boinc boinc      4096 Mar  8 17:27 shared
[2026-03-08 21:13:18] -rw-r--r--. 2 boinc boinc    597937 Mar  8 17:27 input.tar.gz
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc         0 Mar  8 17:27 boinc_lockfile
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc      2499 Mar  8 17:27 pandaJob.out
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc    999212 Mar  8 17:27 agis_schedconf.cvmfs.json
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc       451 Mar  8 17:27 workernode_map.json
[2026-03-08 21:13:18] drwx------. 5 boinc boinc      4096 Mar  8 17:27 pilot3
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc 203511709 Mar  8 21:11 HITS.48996069._000342.pool.root.1
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc       530 Mar  8 21:11 boinc_task_state.xml
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc      1033 Mar  8 21:12 memory_monitor_summary.json
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc   1511578 Mar  8 21:12 agis_ddmendpoints.agis.ALL.json
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc    422657 Mar  8 21:12 log.48996069._000342.job.log.tgz.1
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc      6401 Mar  8 21:12 heartbeat.json
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc        95 Mar  8 21:12 pilot_heartbeat.json
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc      8192 Mar  8 21:12 boinc_mmap_file
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc        27 Mar  8 21:12 wrapper_checkpoint.txt
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc      4829 Mar  8 21:13 pilotlog.txt
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc   1887203 Mar  8 21:13 log.48996069._000342.job.log.1
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc       357 Mar  8 21:13 output.list
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc       620 Mar  8 21:13 runtime_log
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc   2324480 Mar  8 21:13 result.tar.gz
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc      9205 Mar  8 21:13 runtime_log.err
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc       665 Mar  8 21:13 CbANDmewnI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm75SLDmBSNGFo.diag
[2026-03-08 21:13:18] -rw-r--r--. 1 boinc boinc     21311 Mar  8 21:13 stderr.txt
[2026-03-08 21:13:18] HITS file was successfully produced:
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc 203511709 Mar  8 21:11 shared/HITS.pool.root.1
[2026-03-08 21:13:18]  *** Contents of shared directory: ***
[2026-03-08 21:13:18] total 725444
[2026-03-08 21:13:18] -rw-r--r--. 2 boinc boinc 536391036 Mar  8 17:27 ATLAS.root_0
[2026-03-08 21:13:18] -rw-r--r--. 2 boinc boinc     15845 Mar  8 17:27 start_atlas.sh
[2026-03-08 21:13:18] -rw-r--r--. 2 boinc boinc    597937 Mar  8 17:27 input.tar.gz
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc 203511709 Mar  8 21:11 HITS.pool.root.1
[2026-03-08 21:13:18] -rw-------. 1 boinc boinc   2324480 Mar  8 21:13 result.tar.gz
21:13:20 (3593543): run_atlas exited; CPU time 48285.046752
21:13:20 (3593543): called boinc_finish(0)

</stderr_txt>
]]>

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