Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:47:42 (437732): wrapper (7.7.26015): starting
19:47:42 (437732): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 19:47:42] Arguments: --nthreads 4
[2026-03-07 19:47:42] Threads: 4
[2026-03-07 19:47:42] Checking for CVMFS
[2026-03-07 19:47:42] No cvmfs_config command found, will try listing directly
[2026-03-07 19:47:42] CVMFS is ok
[2026-03-07 19:47:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 19:47:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 19:47:42] Further information can be found at the LHC@home message board.
[2026-03-07 19:47:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 19:47:42] Checking for apptainer binary...
[2026-03-07 19:47:42] which: no apptainer in ((null))
[2026-03-07 19:47:42] apptainer is not installed, using version from CVMFS
[2026-03-07 19:47:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 19:47:43] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-07 19:47:43] apptainer works
[2026-03-07 19:47:43] Set ATHENA_PROC_NUMBER=4
[2026-03-07 19:47:43] Set ATHENA_CORE_NUMBER=4
[2026-03-07 19:47:43] Starting ATLAS job with PandaID=7043368986
[2026-03-07 19:47:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 22:53:18]  *** The last 200 lines of the pilot log: ***
[2026-03-07 22:53:18] 2026-03-07 21:52:17,922 | INFO     | mean x: 1772914785.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,922 | INFO     | mean y: 2325590.906077348
[2026-03-07 22:53:18] 2026-03-07 21:52:17,922 | INFO     | intersect: -22308822582.47939
[2026-03-07 22:53:18] 2026-03-07 21:52:17,922 | INFO     | chi2: 1.103745063987364
[2026-03-07 22:53:18] 2026-03-07 21:52:17,922 | INFO     | sum of square deviations: 1690450300.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | sum of deviations: 22393474479.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | mean x: 1772914632.5
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | mean y: 2324824.125
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | intersect: -23483558538.630127
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | chi2: 1.1042036255351766
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | current chi2=1.1042036255351766 (change=-0.041545965891430815 %)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | right removable region: 175
[2026-03-07 22:53:18] 2026-03-07 21:52:17,923 | INFO     | sum of square deviations: 1690450300.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | sum of deviations: 4402587068.499999
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | mean x: 1772914937.5
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | mean y: 2344561.471590909
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | intersect: -4615012350.700263
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | chi2: 0.0006909353256302614
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | current chi2=0.0006909353256302614 (change=99.93740082305472 %)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | sum of square deviations: 1550429070.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | sum of deviations: 3525973728.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,924 | INFO     | mean x: 1772915090.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | mean y: 2345511.730994152
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | intersect: -4029604191.9176583
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | chi2: 0.0002289090452210019
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | current chi2=0.0002289090452210019 (change=66.86968566671645 %)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | sum of square deviations: 1418361477.5
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | sum of deviations: 3106880883.500001
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | mean x: 1772915242.5
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | mean y: 2345994.5722891567
[2026-03-07 22:53:18] 2026-03-07 21:52:17,925 | INFO     | intersect: -3881174928.9498453
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | chi2: 0.00019925569669661578
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | current chi2=0.00019925569669661578 (change=12.954205674029648 %)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | left removable region: 30
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | sum of square deviations: 945282840.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | sum of deviations: 2077691903.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | mean x: 1772915517.0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | mean y: 2346928.268965517
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | intersect: -3894446770.4021735
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | chi2: 0.0001232642255835909
[2026-03-07 22:53:18] 2026-03-07 21:52:17,926 | INFO     | current memory leak: 2.20 B/s (using 145 data points, chi2=0.00)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | could have reported an average CPU frequency of 3595 MHz (10 samples)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | ..............................
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . Timing measurements:
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . get job = 0 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . initial setup = 4 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . payload setup = 4 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . stage-in = 0 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . payload execution = 11042 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . stage-out = 0 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | . log creation = 0 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,927 | INFO     | ..............................
[2026-03-07 22:53:18] 2026-03-07 21:52:17,975 | INFO     | 
[2026-03-07 22:53:18] 2026-03-07 21:52:17,976 | INFO     | job summary report
[2026-03-07 22:53:18] 2026-03-07 21:52:17,976 | INFO     | --------------------------------------------------
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | PanDA job id: 7043368986
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | task id: 48967059
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | errors: (none)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | pilot state: finished 
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | transexitcode: 0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | exeerrorcode: 0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | exeerrordiag: 
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | exitcode: 0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | exitmsg: OK
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | cpuconsumptiontime: 42640 s
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | nevents: 400
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | neventsw: 0
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | pid: 448154
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | pgrp: 448154
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | corecount: 4
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | event service: False
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | sizes: {0: 2295798, 11: 2295798, 11050: 2325024, 11051: 2334100, 11052: 2334238}
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | --------------------------------------------------
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | 
[2026-03-07 22:53:18] 2026-03-07 21:52:17,978 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/5
[2026-03-07 22:53:18] 2026-03-07 21:52:17,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,995 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,995 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,995 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,995 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,995 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,995 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | job 7043368986 has completed (purged errors)
[2026-03-07 22:53:18] 2026-03-07 21:52:17,996 | INFO     | overall cleanup function is called
[2026-03-07 22:53:18] 2026-03-07 21:52:18,152 | WARNING  | process 448154 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 22:53:18] 2026-03-07 21:52:18,474 | INFO     | using path: /var/lib/boinc/var/slot72/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 22:53:18] 2026-03-07 21:52:18,474 | INFO     | using path: /var/lib/boinc/var/slot72/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 22:53:18] 2026-03-07 21:52:18,475 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 22:53:18] 2026-03-07 21:52:18,475 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 22:53:18] 2026-03-07 21:52:18,475 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc/var/slot72/slots/5/PanDA_Pilot-7043368986/payload.stdout) since it has not been created yet
[2026-03-07 22:53:18] 2026-03-07 21:52:18,475 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/5
[2026-03-07 22:53:18] 2026-03-07 21:52:18,495 | INFO     | sufficient remaining disk space (20650655744 B)
[2026-03-07 22:53:18] 2026-03-07 21:52:18,495 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-03-07 22:53:18] 2026-03-07 21:52:18,495 | INFO     | output file size check: skipping output file /var/lib/boinc/var/slot72/slots/5/PanDA_Pilot-7043368986/HITS.48967059._000891.pool.root.1 since it does not exist
[2026-03-07 22:53:18] 2026-03-07 21:52:18,959 | INFO     | number of running child processes to parent process 448154: 1
[2026-03-07 22:53:18] 2026-03-07 21:52:18,959 | INFO     | maximum number of monitored processes: 6
[2026-03-07 22:53:18] 2026-03-07 21:52:18,959 | INFO     | aborting job monitoring since job object (job id=7043368986) has expired
[2026-03-07 22:53:18] 2026-03-07 21:52:19,003 | INFO     | --- collectZombieJob: --- 10, [448154]
[2026-03-07 22:53:18] 2026-03-07 21:52:19,004 | INFO     | zombie collector waiting for pid 448154
[2026-03-07 22:53:18] 2026-03-07 21:52:19,004 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 22:53:18] 2026-03-07 21:52:19,004 | INFO     | collected zombie processes
[2026-03-07 22:53:18] 2026-03-07 21:52:19,004 | INFO     | will attempt to kill all subprocesses of pid=448154
[2026-03-07 22:53:18] 2026-03-07 21:52:19,416 | INFO     | process IDs to be killed: [448154] (in reverse order)
[2026-03-07 22:53:18] 2026-03-07 21:52:19,661 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 22:53:18] 2026-03-07 21:52:19,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 22:53:18] 2026-03-07 21:52:19,693 | INFO     | did not find any defunct processes belonging to 448154
[2026-03-07 22:53:18] 2026-03-07 21:52:19,723 | INFO     | did not find any defunct processes belonging to 448154
[2026-03-07 22:53:18] 2026-03-07 21:52:19,723 | INFO     | ready for new job
[2026-03-07 22:53:18] 2026-03-07 21:52:19,723 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 22:53:18] 2026-03-07 21:52:19,725 | INFO     | **************************************
[2026-03-07 22:53:18] 2026-03-07 21:52:19,725 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 22:53:18] 2026-03-07 21:52:19,725 | INFO     | **************************************
[2026-03-07 22:53:18] 2026-03-07 21:52:19,725 | INFO     | 
[2026-03-07 22:53:18] 2026-03-07 21:52:19,731 | INFO     | architecture information:
[2026-03-07 22:53:18] 2026-03-07 21:52:19,732 | INFO     | executing command: cat /etc/os-release
[2026-03-07 22:53:18] 2026-03-07 21:52:19,746 | INFO     | cat /etc/os-release:
[2026-03-07 22:53:18] NAME="CentOS Linux"
[2026-03-07 22:53:18] VERSION="7 (Core)"
[2026-03-07 22:53:18] ID="centos"
[2026-03-07 22:53:18] ID_LIKE="rhel fedora"
[2026-03-07 22:53:18] VERSION_ID="7"
[2026-03-07 22:53:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 22:53:18] ANSI_COLOR="0;31"
[2026-03-07 22:53:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 22:53:18] HOME_URL="https://www.centos.org/"
[2026-03-07 22:53:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 22:53:18] 
[2026-03-07 22:53:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 22:53:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 22:53:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 22:53:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 22:53:18] 
[2026-03-07 22:53:18] 2026-03-07 21:52:19,747 | INFO     | **************************************
[2026-03-07 22:53:18] 2026-03-07 21:52:20,249 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/5
[2026-03-07 22:53:18] 2026-03-07 21:52:20,264 | INFO     | sufficient remaining disk space (20651704320 B)
[2026-03-07 22:53:18] 2026-03-07 21:52:20,268 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 22:53:18] 2026-03-07 21:52:20,268 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 22:53:18] 2026-03-07 21:52:20,268 | INFO     | update_server=False
[2026-03-07 22:53:18] 2026-03-07 21:52:20,268 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 22:53:18] 2026-03-07 21:52:20,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 22:53:18] 2026-03-07 21:52:20,268 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 22:53:18] 2026-03-07 21:52:20,269 | INFO     | aborting loop
[2026-03-07 22:53:18] 2026-03-07 21:52:20,802 | INFO     | all data control threads have been joined
[2026-03-07 22:53:18] 2026-03-07 21:52:20,901 | INFO     | all job control threads have been joined
[2026-03-07 22:53:18] 2026-03-07 21:52:21,087 | INFO     | all payload control threads have been joined
[2026-03-07 22:53:18] 2026-03-07 21:52:21,273 | INFO     | [job] retrieve thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:21,274 | INFO     | [job] job monitor thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:21,505 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:21,782 | INFO     | [payload] failed_post thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:21,808 | INFO     | [data] control thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:21,907 | INFO     | [job] control thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:21,978 | INFO     | [payload] validate_post thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,041 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,093 | INFO     | [payload] control thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,175 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,206 | INFO     | [job] validate thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,274 | INFO     | [data] copytool_out thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,387 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,720 | INFO     | [data] copytool_in thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:22,986 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 22:53:18] 2026-03-07 21:52:23,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 22:53:18] 2026-03-07 21:52:23,991 | INFO     | [job] queue monitor thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:27,050 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 22:53:18] 2026-03-07 21:52:50,786 | INFO     | PID=442281 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-07 22:53:18] 2026-03-07 21:52:50,786 | INFO     | .. there are 51 such processes running
[2026-03-07 22:53:18] 2026-03-07 21:52:50,786 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 22:53:18] 2026-03-07 21:52:50,786 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 22:53:18] 2026-03-07 21:52:50,786 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 22:53:18] 2026-03-07 21:53:12,827 | INFO     | [monitor] cgroup control has ended
[2026-03-07 22:53:18] 2026-03-07 21:53:13,193 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23072153216832)>', '<ExcThread(monitor, started 23071911319296)>']
[2026-03-07 22:53:18] 2026-03-07 21:53:13,902 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 22:53:18] 2026-03-07 21:53:13,903 | INFO     | [monitor] control thread has ended
[2026-03-07 22:53:18] 2026-03-07 21:53:18,219 | INFO     | all workflow threads have been joined
[2026-03-07 22:53:18] 2026-03-07 21:53:18,219 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 22:53:18] 2026-03-07 21:53:18,219 | INFO     | traces error code: 0
[2026-03-07 22:53:18] 2026-03-07 21:53:18,219 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 22:53:18] 2026-03-07 21:53:18,395 [wrapper] ==== pilot stdout END ====
[2026-03-07 22:53:18] 2026-03-07 21:53:18,397 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 22:53:18] 2026-03-07 21:53:18,399 [wrapper] pilotpid: 442281
[2026-03-07 22:53:18] 2026-03-07 21:53:18,401 [wrapper] Pilot exit status: 0
[2026-03-07 22:53:18] 2026-03-07 21:53:18,408 [wrapper] pandaids: 7043368986
[2026-03-07 22:53:18] 2026-03-07 21:53:18,536 [wrapper] cleanup supervisor_pilot 2063455 442282
[2026-03-07 22:53:18] 2026-03-07 21:53:18,539 [wrapper] Test setup, not cleaning
[2026-03-07 22:53:18] 2026-03-07 21:53:18,544 [wrapper] apfmon messages muted
[2026-03-07 22:53:18] 2026-03-07 21:53:18,546 [wrapper] ==== wrapper stdout END ====
[2026-03-07 22:53:18] 2026-03-07 21:53:18,548 [wrapper] ==== wrapper stderr END ====
[2026-03-07 22:53:18]  *** Error codes and diagnostics ***
[2026-03-07 22:53:18]     "exeErrorCode": 0,
[2026-03-07 22:53:18]     "exeErrorDiag": "",
[2026-03-07 22:53:18]     "pilotErrorCode": 0,
[2026-03-07 22:53:18]     "pilotErrorDiag": "",
[2026-03-07 22:53:18]  *** Listing of results directory ***
[2026-03-07 22:53:18] total 492276
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc    584627 Mar  6 17:14 pilot3.tar.gz
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc      5111 Mar  6 17:44 queuedata.json
[2026-03-07 22:53:18] -rwx------. 1 boinc boinc     36322 Mar  6 17:44 runpilot2-wrapper.sh
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc       100 Mar  7 19:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 22:53:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 19:47 run_atlas
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc       105 Mar  7 19:47 job.xml
[2026-03-07 22:53:18] -rw-r--r--. 2 boinc boinc 228122829 Mar  7 19:47 EVNT.48967057._000023.pool.root.1
[2026-03-07 22:53:18] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:47 start_atlas.sh
[2026-03-07 22:53:18] drwxrwx--x. 2 boinc boinc      4096 Mar  7 19:47 shared
[2026-03-07 22:53:18] -rw-r--r--. 2 boinc boinc    597939 Mar  7 19:47 input.tar.gz
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc      6707 Mar  7 19:47 init_data.xml
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc         0 Mar  7 19:47 boinc_lockfile
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc      2548 Mar  7 19:47 pandaJob.out
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc    999177 Mar  7 19:47 agis_schedconf.cvmfs.json
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc       443 Mar  7 19:47 workernode_map.json
[2026-03-07 22:53:18] drwx------. 5 boinc boinc      4096 Mar  7 19:47 pilot3
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc 268189152 Mar  7 22:51 HITS.48967059._000891.pool.root.1
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc       530 Mar  7 22:51 boinc_task_state.xml
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc      1045 Mar  7 22:52 memory_monitor_summary.json
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc   1521291 Mar  7 22:52 agis_ddmendpoints.agis.ALL.json
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc    363019 Mar  7 22:52 log.48967059._000891.job.log.tgz.1
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc      6354 Mar  7 22:52 heartbeat.json
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc        95 Mar  7 22:52 pilot_heartbeat.json
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc      8192 Mar  7 22:52 boinc_mmap_file
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc        28 Mar  7 22:52 wrapper_checkpoint.txt
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc      4828 Mar  7 22:53 pilotlog.txt
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc   1558654 Mar  7 22:53 log.48967059._000891.job.log.1
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc       357 Mar  7 22:53 output.list
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc       620 Mar  7 22:53 runtime_log
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc   1935360 Mar  7 22:53 result.tar.gz
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc      9205 Mar  7 22:53 runtime_log.err
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc       665 Mar  7 22:53 ft3NDmoSnI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrfQLDmnwda8n.diag
[2026-03-07 22:53:18] -rw-r--r--. 1 boinc boinc     21233 Mar  7 22:53 stderr.txt
[2026-03-07 22:53:18] HITS file was successfully produced:
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc 268189152 Mar  7 22:51 shared/HITS.pool.root.1
[2026-03-07 22:53:18]  *** Contents of shared directory: ***
[2026-03-07 22:53:18] total 487184
[2026-03-07 22:53:18] -rw-r--r--. 2 boinc boinc 228122829 Mar  7 19:47 ATLAS.root_0
[2026-03-07 22:53:18] -rw-r--r--. 2 boinc boinc     15845 Mar  7 19:47 start_atlas.sh
[2026-03-07 22:53:18] -rw-r--r--. 2 boinc boinc    597939 Mar  7 19:47 input.tar.gz
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc 268189152 Mar  7 22:51 HITS.pool.root.1
[2026-03-07 22:53:18] -rw-------. 1 boinc boinc   1935360 Mar  7 22:53 result.tar.gz
22:53:19 (437732): run_atlas exited; CPU time 43165.236296
22:53:19 (437732): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN