Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:44:26 (3255871): wrapper (7.7.26015): starting
08:44:26 (3255871): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 08:44:26] Arguments: --nthreads 4
[2026-03-08 08:44:26] Threads: 4
[2026-03-08 08:44:26] Checking for CVMFS
[2026-03-08 08:44:26] No cvmfs_config command found, will try listing directly
[2026-03-08 08:44:26] CVMFS is ok
[2026-03-08 08:44:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 08:44:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 08:44:26] Further information can be found at the LHC@home message board.
[2026-03-08 08:44:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 08:44:26] Checking for apptainer binary...
[2026-03-08 08:44:26] which: no apptainer in ((null))
[2026-03-08 08:44:26] apptainer is not installed, using version from CVMFS
[2026-03-08 08:44:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 08:44:26] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot80/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-08 08:44:26] apptainer works
[2026-03-08 08:44:26] Set ATHENA_PROC_NUMBER=4
[2026-03-08 08:44:26] Set ATHENA_CORE_NUMBER=4
[2026-03-08 08:44:26] Starting ATLAS job with PandaID=7043484738
[2026-03-08 08:44:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot80/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 10:17:56]  *** The last 200 lines of the pilot log: ***
[2026-03-08 10:17:56]  is_altstaged=None
[2026-03-08 10:17:56]  is_tar=False
[2026-03-08 10:17:56]  lfn=log.48996069._003833.job.log.tgz.1
[2026-03-08 10:17:56]  mtime=0
[2026-03-08 10:17:56]  protocol_id=None
[2026-03-08 10:17:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 10:17:56]  replicas=None
[2026-03-08 10:17:56]  scope=mc23_13p6TeV
[2026-03-08 10:17:56]  status=None
[2026-03-08 10:17:56]  status_code=0
[2026-03-08 10:17:56]  storage_token=
[2026-03-08 10:17:56]  surl=/var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043484738/log.48996069._003833.job.log.tgz.1
[2026-03-08 10:17:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/fd/log.48996069._003833.job.log.tgz.1
[2026-03-08 10:17:56]  workdir=None
[2026-03-08 10:17:56] ]
[2026-03-08 10:17:56] 2026-03-08 09:17:08,873 | INFO     | transferring file log.48996069._003833.job.log.tgz.1 from /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043484738/log.48996069._003833.job.log.tgz.1 to /var/lib/b
[2026-03-08 10:17:56] 2026-03-08 09:17:08,873 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043484738/log.48996069._003833.job.log.tgz.1 /var/lib/boinc/var/slot80/slots/2/lo
[2026-03-08 10:17:56] 2026-03-08 09:17:08,944 | INFO     | adding to output.list: log.48996069._003833.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/47/fd/log.48996069._003833.job.log.tg
[2026-03-08 10:17:56] 2026-03-08 09:17:08,944 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 10:17:56] 2026-03-08 09:17:08,944 | INFO     | summary of transferred files:
[2026-03-08 10:17:56] 2026-03-08 09:17:08,944 | INFO     |  -- lfn=log.48996069._003833.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 10:17:56] 2026-03-08 09:17:08,944 | INFO     | stage-out finished correctly
[2026-03-08 10:17:56] 2026-03-08 09:17:09,046 | INFO     | time since job start (5550s) is within the limit (349056.0s)
[2026-03-08 10:17:56] 2026-03-08 09:17:09,512 | WARNING  | process 3266352 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 10:17:56] 2026-03-08 09:17:09,513 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043484738/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 10:17:56] 2026-03-08 09:17:10,127 | INFO     | number of running child processes to parent process 3266352: 1
[2026-03-08 10:17:56] 2026-03-08 09:17:10,127 | INFO     | maximum number of monitored processes: 6
[2026-03-08 10:17:56] 2026-03-08 09:17:11,051 | INFO     | time since job start (5552s) is within the limit (349056.0s)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,647 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 10:17:56] 2026-03-08 09:17:11,775 | INFO     | job 7043484738 has state=finished
[2026-03-08 10:17:56] 2026-03-08 09:17:11,775 | INFO     | preparing for final server update for job 7043484738 in state='finished'
[2026-03-08 10:17:56] 2026-03-08 09:17:11,775 | INFO     | reading metadata from: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043484738/jobReport.json
[2026-03-08 10:17:56] 2026-03-08 09:17:11,777 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot80/slots/2/workernode_map.json
[2026-03-08 10:17:56] 2026-03-08 09:17:11,777 | INFO     | this job has now completed (state=finished)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,777 | INFO     | log transfer has been attempted: DONE
[2026-03-08 10:17:56] 2026-03-08 09:17:11,778 | INFO     | job 7043484738 has finished - writing final server update
[2026-03-08 10:17:56] 2026-03-08 09:17:11,778 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_538448/.job.ad'
[2026-03-08 10:17:56] 2026-03-08 09:17:11,778 | INFO     | total number of processed events: 400 (read)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,803 | INFO     | using path: /var/lib/boinc/var/slot80/slots/2/PanDA_Pilot-7043484738/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,804 | INFO     | extracted standard info from prmon json
[2026-03-08 10:17:56] 2026-03-08 09:17:11,804 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 10:17:56] 2026-03-08 09:17:11,804 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 10:17:56] 2026-03-08 09:17:11,804 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 10:17:56] 2026-03-08 09:17:11,804 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 10:17:56] 2026-03-08 09:17:11,805 | INFO     | fitting pss+swap vs Time
[2026-03-08 10:17:56] 2026-03-08 09:17:11,805 | INFO     | sum of square deviations: 183761585.0
[2026-03-08 10:17:56] 2026-03-08 09:17:11,805 | INFO     | sum of deviations: 473511280.0
[2026-03-08 10:17:56] 2026-03-08 09:17:11,805 | INFO     | mean x: 1772958736.5
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | mean y: 2333850.761904762
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | intersect: -4566172459.777905
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | chi2: 0.0007923957954497762
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | current memory leak: 2.58 B/s (using 84 data points, chi2=0.00)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | could have reported an average CPU frequency of 3575 MHz (7 samples)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | ..............................
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . Timing measurements:
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . get job = 0 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . initial setup = 5 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . payload setup = 5 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . stage-in = 0 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . payload execution = 5528 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . stage-out = 0 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | . log creation = 0 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,806 | INFO     | ..............................
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | 
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | job summary report
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | --------------------------------------------------
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | PanDA job id: 7043484738
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | task id: 48996069
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | errors: (none)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | pilot state: finished 
[2026-03-08 10:17:56] 2026-03-08 09:17:11,858 | INFO     | transexitcode: 0
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | exeerrorcode: 0
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | exeerrordiag: 
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | exitcode: 0
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | exitmsg: OK
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | cpuconsumptiontime: 21052 s
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | nevents: 400
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | neventsw: 0
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | pid: 3266352
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | pgrp: 3266352
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | corecount: 4
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | event service: False
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | sizes: {0: 2295736, 11: 2295736, 5537: 2322425, 5538: 2331445, 5540: 2331501, 5541: 2331695}
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | --------------------------------------------------
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | 
[2026-03-08 10:17:56] 2026-03-08 09:17:11,859 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot80/slots/2
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | job 7043484738 has completed (purged errors)
[2026-03-08 10:17:56] 2026-03-08 09:17:11,929 | INFO     | overall cleanup function is called
[2026-03-08 10:17:56] 2026-03-08 09:17:12,935 | INFO     | --- collectZombieJob: --- 10, [3266352]
[2026-03-08 10:17:56] 2026-03-08 09:17:12,936 | INFO     | zombie collector waiting for pid 3266352
[2026-03-08 10:17:56] 2026-03-08 09:17:12,936 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 10:17:56] 2026-03-08 09:17:12,936 | INFO     | collected zombie processes
[2026-03-08 10:17:56] 2026-03-08 09:17:12,936 | INFO     | will attempt to kill all subprocesses of pid=3266352
[2026-03-08 10:17:56] 2026-03-08 09:17:13,496 | INFO     | process IDs to be killed: [3266352] (in reverse order)
[2026-03-08 10:17:56] 2026-03-08 09:17:13,805 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 10:17:56] 2026-03-08 09:17:13,805 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 10:17:56] 2026-03-08 09:17:13,838 | INFO     | did not find any defunct processes belonging to 3266352
[2026-03-08 10:17:56] 2026-03-08 09:17:13,871 | INFO     | did not find any defunct processes belonging to 3266352
[2026-03-08 10:17:56] 2026-03-08 09:17:13,871 | INFO     | ready for new job
[2026-03-08 10:17:56] 2026-03-08 09:17:13,871 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 10:17:56] 2026-03-08 09:17:13,872 | INFO     | **************************************
[2026-03-08 10:17:56] 2026-03-08 09:17:13,872 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 10:17:56] 2026-03-08 09:17:13,873 | INFO     | **************************************
[2026-03-08 10:17:56] 2026-03-08 09:17:13,873 | INFO     | 
[2026-03-08 10:17:56] 2026-03-08 09:17:13,878 | INFO     | architecture information:
[2026-03-08 10:17:56] 2026-03-08 09:17:13,878 | INFO     | executing command: cat /etc/os-release
[2026-03-08 10:17:56] 2026-03-08 09:17:13,981 | INFO     | cat /etc/os-release:
[2026-03-08 10:17:56] NAME="CentOS Linux"
[2026-03-08 10:17:56] VERSION="7 (Core)"
[2026-03-08 10:17:56] ID="centos"
[2026-03-08 10:17:56] ID_LIKE="rhel fedora"
[2026-03-08 10:17:56] VERSION_ID="7"
[2026-03-08 10:17:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 10:17:56] ANSI_COLOR="0;31"
[2026-03-08 10:17:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 10:17:56] HOME_URL="https://www.centos.org/"
[2026-03-08 10:17:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 10:17:56] 
[2026-03-08 10:17:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 10:17:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 10:17:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 10:17:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 10:17:56] 
[2026-03-08 10:17:56] 2026-03-08 09:17:13,981 | INFO     | **************************************
[2026-03-08 10:17:56] 2026-03-08 09:17:14,484 | INFO     | executing command: df -mP /var/lib/boinc/var/slot80/slots/2
[2026-03-08 10:17:56] 2026-03-08 09:17:14,514 | INFO     | sufficient remaining disk space (20371734528 B)
[2026-03-08 10:17:56] 2026-03-08 09:17:14,514 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 10:17:56] 2026-03-08 09:17:14,514 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 10:17:56] 2026-03-08 09:17:14,514 | INFO     | update_server=False
[2026-03-08 10:17:56] 2026-03-08 09:17:14,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 10:17:56] 2026-03-08 09:17:14,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 10:17:56] 2026-03-08 09:17:14,515 | INFO     | aborting loop
[2026-03-08 10:17:56] 2026-03-08 09:17:14,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 10:17:56] 2026-03-08 09:17:14,624 | INFO     | all payload control threads have been joined
[2026-03-08 10:17:56] 2026-03-08 09:17:15,312 | INFO     | all job control threads have been joined
[2026-03-08 10:17:56] 2026-03-08 09:17:15,448 | INFO     | all data control threads have been joined
[2026-03-08 10:17:56] 2026-03-08 09:17:15,521 | INFO     | [job] retrieve thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:15,522 | INFO     | [job] job monitor thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:15,555 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:15,593 | INFO     | [job] validate thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:15,631 | INFO     | [payload] control thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:15,783 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:15,833 | INFO     | [data] copytool_in thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:16,318 | INFO     | [job] control thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:16,408 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:16,454 | INFO     | [data] control thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:16,497 | INFO     | [payload] failed_post thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:16,553 | INFO     | [data] copytool_out thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:16,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 10:17:56] 2026-03-08 09:17:17,093 | INFO     | [payload] validate_post thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:17,710 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 10:17:56] 2026-03-08 09:17:17,879 | INFO     | [job] queue monitor thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:21,716 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:25,367 | INFO     | job.realtimelogging is not enabled
[2026-03-08 10:17:56] 2026-03-08 09:17:26,373 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 10:17:56] 2026-03-08 09:17:44,780 | INFO     | PID=3260531 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 10:17:56] 2026-03-08 09:17:44,780 | INFO     | .. there are 50 such processes running
[2026-03-08 10:17:56] 2026-03-08 09:17:44,780 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 10:17:56] 2026-03-08 09:17:44,780 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 10:17:56] 2026-03-08 09:17:44,780 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 10:17:56] 2026-03-08 09:17:48,722 | INFO     | [monitor] cgroup control has ended
[2026-03-08 10:17:56] 2026-03-08 09:17:50,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22396699633472)>', '<ExcThread(monitor, started 22396460607232)>']
[2026-03-08 10:17:56] 2026-03-08 09:17:50,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 10:17:56] 2026-03-08 09:17:50,811 | INFO     | [monitor] control thread has ended
[2026-03-08 10:17:56] 2026-03-08 09:17:55,702 | INFO     | all workflow threads have been joined
[2026-03-08 10:17:56] 2026-03-08 09:17:55,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 10:17:56] 2026-03-08 09:17:55,702 | INFO     | traces error code: 0
[2026-03-08 10:17:56] 2026-03-08 09:17:55,702 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 10:17:56] 2026-03-08 09:17:55,893 [wrapper] ==== pilot stdout END ====
[2026-03-08 10:17:56] 2026-03-08 09:17:55,902 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 10:17:56] 2026-03-08 09:17:55,910 [wrapper] pilotpid: 3260531
[2026-03-08 10:17:56] 2026-03-08 09:17:55,913 [wrapper] Pilot exit status: 0
[2026-03-08 10:17:56] 2026-03-08 09:17:55,971 [wrapper] pandaids: 7043484738
[2026-03-08 10:17:56] 2026-03-08 09:17:56,144 [wrapper] cleanup supervisor_pilot 4121293 3260532
[2026-03-08 10:17:56] 2026-03-08 09:17:56,162 [wrapper] Test setup, not cleaning
[2026-03-08 10:17:56] 2026-03-08 09:17:56,169 [wrapper] apfmon messages muted
[2026-03-08 10:17:56] 2026-03-08 09:17:56,172 [wrapper] ==== wrapper stdout END ====
[2026-03-08 10:17:56] 2026-03-08 09:17:56,174 [wrapper] ==== wrapper stderr END ====
[2026-03-08 10:17:56]  *** Error codes and diagnostics ***
[2026-03-08 10:17:56]     "exeErrorCode": 0,
[2026-03-08 10:17:56]     "exeErrorDiag": "",
[2026-03-08 10:17:56]     "pilotErrorCode": 0,
[2026-03-08 10:17:56]     "pilotErrorDiag": "",
[2026-03-08 10:17:56]  *** Listing of results directory ***
[2026-03-08 10:17:56] total 730380
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc      5111 Mar  6 21:02 queuedata.json
[2026-03-08 10:17:56] -rwx------. 1 boinc boinc     36322 Mar  6 21:02 runpilot2-wrapper.sh
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc    584627 Mar  6 21:02 pilot3.tar.gz
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc       100 Mar  8 08:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 10:17:56] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 08:44 run_atlas
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc       105 Mar  8 08:44 job.xml
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc      6706 Mar  8 08:44 init_data.xml
[2026-03-08 10:17:56] -rw-r--r--. 2 boinc boinc 546156317 Mar  8 08:44 EVNT.48329618._000077.pool.root.1
[2026-03-08 10:17:56] -rw-r--r--. 2 boinc boinc     15845 Mar  8 08:44 start_atlas.sh
[2026-03-08 10:17:56] drwxrwx--x. 2 boinc boinc      4096 Mar  8 08:44 shared
[2026-03-08 10:17:56] -rw-r--r--. 2 boinc boinc    597933 Mar  8 08:44 input.tar.gz
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc         0 Mar  8 08:44 boinc_lockfile
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc      2502 Mar  8 08:44 pandaJob.out
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc    999169 Mar  8 08:44 agis_schedconf.cvmfs.json
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc   1521291 Mar  8 08:44 agis_ddmendpoints.agis.ALL.json
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc       444 Mar  8 08:44 workernode_map.json
[2026-03-08 10:17:56] drwx------. 5 boinc boinc      4096 Mar  8 08:44 pilot3
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc 195601224 Mar  8 10:16 HITS.48996069._003833.pool.root.1
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc       530 Mar  8 10:16 boinc_task_state.xml
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc        95 Mar  8 10:17 pilot_heartbeat.json
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc      1044 Mar  8 10:17 memory_monitor_summary.json
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc    302805 Mar  8 10:17 log.48996069._003833.job.log.tgz.1
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc      6365 Mar  8 10:17 heartbeat.json
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc      8192 Mar  8 10:17 boinc_mmap_file
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc        27 Mar  8 10:17 wrapper_checkpoint.txt
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc      4901 Mar  8 10:17 pilotlog.txt
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc    804140 Mar  8 10:17 log.48996069._003833.job.log.1
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc       357 Mar  8 10:17 output.list
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc       620 Mar  8 10:17 runtime_log
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc   1126400 Mar  8 10:17 result.tar.gz
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc      9204 Mar  8 10:17 runtime_log.err
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc       663 Mar  8 10:17 GcwNDmTYqI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmeaTLDmlvc6Hn.diag
[2026-03-08 10:17:56] -rw-r--r--. 1 boinc boinc     21356 Mar  8 10:17 stderr.txt
[2026-03-08 10:17:56] HITS file was successfully produced:
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc 195601224 Mar  8 10:16 shared/HITS.pool.root.1
[2026-03-08 10:17:56]  *** Contents of shared directory: ***
[2026-03-08 10:17:56] total 726084
[2026-03-08 10:17:56] -rw-r--r--. 2 boinc boinc 546156317 Mar  8 08:44 ATLAS.root_0
[2026-03-08 10:17:56] -rw-r--r--. 2 boinc boinc     15845 Mar  8 08:44 start_atlas.sh
[2026-03-08 10:17:56] -rw-r--r--. 2 boinc boinc    597933 Mar  8 08:44 input.tar.gz
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc 195601224 Mar  8 10:16 HITS.pool.root.1
[2026-03-08 10:17:56] -rw-------. 1 boinc boinc   1126400 Mar  8 10:17 result.tar.gz
10:17:57 (3255871): run_atlas exited; CPU time 21300.244921
10:17:57 (3255871): called boinc_finish(0)

</stderr_txt>
]]>

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