Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:04:17 (2221448): wrapper (7.7.26015): starting
01:04:17 (2221448): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 01:04:17] Arguments: --nthreads 4
[2026-03-08 01:04:17] Threads: 4
[2026-03-08 01:04:17] Checking for CVMFS
[2026-03-08 01:04:17] No cvmfs_config command found, will try listing directly
[2026-03-08 01:04:17] CVMFS is ok
[2026-03-08 01:04:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 01:04:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 01:04:17] Further information can be found at the LHC@home message board.
[2026-03-08 01:04:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 01:04:17] Checking for apptainer binary...
[2026-03-08 01:04:17] which: no apptainer in ((null))
[2026-03-08 01:04:17] apptainer is not installed, using version from CVMFS
[2026-03-08 01:04:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 01:04:18] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-08 01:04:18] apptainer works
[2026-03-08 01:04:18] Set ATHENA_PROC_NUMBER=4
[2026-03-08 01:04:18] Set ATHENA_CORE_NUMBER=4
[2026-03-08 01:04:18] Starting ATLAS job with PandaID=7043337888
[2026-03-08 01:04:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 05:01:18]  *** The last 200 lines of the pilot log: ***
[2026-03-08 05:01:18] 2026-03-08 04:00:43,142 | INFO     | log transfer has been attempted: DONE
[2026-03-08 05:01:18] 2026-03-08 04:00:43,142 | INFO     | job 7043337888 has finished - writing final server update
[2026-03-08 05:01:18] 2026-03-08 04:00:43,143 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2037581/.job.ad'
[2026-03-08 05:01:18] 2026-03-08 04:00:43,143 | INFO     | total number of processed events: 400 (read)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,177 | INFO     | using path: /var/lib/boinc/var/slot20/slots/1/PanDA_Pilot-7043337888/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,178 | INFO     | extracted standard info from prmon json
[2026-03-08 05:01:18] 2026-03-08 04:00:43,178 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 05:01:18] 2026-03-08 04:00:43,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 05:01:18] 2026-03-08 04:00:43,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 05:01:18] 2026-03-08 04:00:43,179 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 05:01:18] 2026-03-08 04:00:43,183 | INFO     | fitting pss+swap vs Time
[2026-03-08 05:01:18] 2026-03-08 04:00:43,184 | INFO     | sum of square deviations: 3871990738.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,185 | INFO     | sum of deviations: 17360260291.000004
[2026-03-08 05:01:18] 2026-03-08 04:00:43,185 | INFO     | mean x: 1772935357.5
[2026-03-08 05:01:18] 2026-03-08 04:00:43,186 | INFO     | mean y: 2301271.5689655175
[2026-03-08 05:01:18] 2026-03-08 04:00:43,186 | INFO     | intersect: -7946741318.655625
[2026-03-08 05:01:18] 2026-03-08 04:00:43,186 | INFO     | chi2: 2.1589388525004987
[2026-03-08 05:01:18] 2026-03-08 04:00:43,186 | INFO     | sum of square deviations: 3627000098.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,188 | INFO     | sum of deviations: 31842435235.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,188 | INFO     | mean x: 1772935205.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,188 | INFO     | mean y: 2310122.1233480177
[2026-03-08 05:01:18] 2026-03-08 04:00:43,188 | INFO     | intersect: -15562777530.39536
[2026-03-08 05:01:18] 2026-03-08 04:00:43,189 | INFO     | chi2: 1.292709827305704
[2026-03-08 05:01:18] 2026-03-08 04:00:43,189 | INFO     | current chi2=1.292709827305704 (change=40.12290687119378 %)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,189 | INFO     | sum of square deviations: 3392567795.5
[2026-03-08 05:01:18] 2026-03-08 04:00:43,191 | INFO     | sum of deviations: 30966048082.5
[2026-03-08 05:01:18] 2026-03-08 04:00:43,191 | INFO     | mean x: 1772935052.5
[2026-03-08 05:01:18] 2026-03-08 04:00:43,191 | INFO     | mean y: 2309551.9504504506
[2026-03-08 05:01:18] 2026-03-08 04:00:43,191 | INFO     | intersect: -16180356614.864746
[2026-03-08 05:01:18] 2026-03-08 04:00:43,191 | INFO     | chi2: 1.293209825129643
[2026-03-08 05:01:18] 2026-03-08 04:00:43,192 | INFO     | current chi2=1.293209825129643 (change=-0.03867827205902542 %)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,192 | INFO     | right removable region: 221
[2026-03-08 05:01:18] 2026-03-08 04:00:43,192 | INFO     | sum of square deviations: 3627000098.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,194 | INFO     | sum of deviations: -10659249677.999998
[2026-03-08 05:01:18] 2026-03-08 04:00:43,194 | INFO     | mean x: 1772935510.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,194 | INFO     | mean y: 2318504.823788546
[2026-03-08 05:01:18] 2026-03-08 04:00:43,194 | INFO     | intersect: 5212729796.100864
[2026-03-08 05:01:18] 2026-03-08 04:00:43,194 | INFO     | chi2: 0.8968832865367432
[2026-03-08 05:01:18] 2026-03-08 04:00:43,194 | INFO     | current chi2=0.8968832865367432 (change=58.45721681751355 %)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,195 | INFO     | sum of square deviations: 3392567795.5
[2026-03-08 05:01:18] 2026-03-08 04:00:43,196 | INFO     | sum of deviations: -7644362894.5
[2026-03-08 05:01:18] 2026-03-08 04:00:43,196 | INFO     | mean x: 1772935662.5
[2026-03-08 05:01:18] 2026-03-08 04:00:43,196 | INFO     | mean y: 2316527.545045045
[2026-03-08 05:01:18] 2026-03-08 04:00:43,197 | INFO     | intersect: 3997214908.2724156
[2026-03-08 05:01:18] 2026-03-08 04:00:43,197 | INFO     | chi2: 0.8864610699401221
[2026-03-08 05:01:18] 2026-03-08 04:00:43,197 | INFO     | current chi2=0.8864610699401221 (change=1.1620482567877746 %)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,197 | INFO     | left removable region: 20
[2026-03-08 05:01:18] 2026-03-08 04:00:43,197 | INFO     | sum of square deviations: 2518000700.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,199 | INFO     | sum of deviations: 4453274865.999999
[2026-03-08 05:01:18] 2026-03-08 04:00:43,199 | INFO     | mean x: 1772935632.0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,199 | INFO     | mean y: 2327345.895522388
[2026-03-08 05:01:18] 2026-03-08 04:00:43,199 | INFO     | intersect: -3133243541.3649235
[2026-03-08 05:01:18] 2026-03-08 04:00:43,199 | INFO     | chi2: 0.0005583951513653059
[2026-03-08 05:01:18] 2026-03-08 04:00:43,200 | INFO     | current memory leak: 1.77 B/s (using 201 data points, chi2=0.00)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,200 | INFO     | could have reported an average CPU frequency of 2525 MHz (11 samples)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,200 | INFO     | ..............................
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . Timing measurements:
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . get job = 0 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . initial setup = 6 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . payload setup = 7 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . stage-in = 0 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . payload execution = 14127 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . stage-out = 1 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | . log creation = 0 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,201 | INFO     | ..............................
[2026-03-08 05:01:18] 2026-03-08 04:00:43,301 | INFO     | 
[2026-03-08 05:01:18] 2026-03-08 04:00:43,301 | INFO     | job summary report
[2026-03-08 05:01:18] 2026-03-08 04:00:43,301 | INFO     | --------------------------------------------------
[2026-03-08 05:01:18] 2026-03-08 04:00:43,301 | INFO     | PanDA job id: 7043337888
[2026-03-08 05:01:18] 2026-03-08 04:00:43,301 | INFO     | task id: 48966988
[2026-03-08 05:01:18] 2026-03-08 04:00:43,301 | INFO     | errors: (none)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,301 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | pilot state: finished 
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | transexitcode: 0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | exeerrorcode: 0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | exeerrordiag: 
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | exitcode: 0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | exitmsg: OK
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | cpuconsumptiontime: 52863 s
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | nevents: 400
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | neventsw: 0
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | pid: 2230803
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | pgrp: 2230803
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | corecount: 4
[2026-03-08 05:01:18] 2026-03-08 04:00:43,302 | INFO     | event service: False
[2026-03-08 05:01:18] 2026-03-08 04:00:43,303 | INFO     | sizes: {0: 2295857, 11: 2295857, 14139: 2326784, 14141: 2335804, 14144: 2336054}
[2026-03-08 05:01:18] 2026-03-08 04:00:43,303 | INFO     | --------------------------------------------------
[2026-03-08 05:01:18] 2026-03-08 04:00:43,303 | INFO     | 
[2026-03-08 05:01:18] 2026-03-08 04:00:43,303 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/1
[2026-03-08 05:01:18] 2026-03-08 04:00:43,340 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,340 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,340 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,340 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,340 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,340 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,341 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,342 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,342 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,342 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 05:01:18] 2026-03-08 04:00:43,342 | INFO     | job 7043337888 has completed (purged errors)
[2026-03-08 05:01:18] 2026-03-08 04:00:43,342 | INFO     | overall cleanup function is called
[2026-03-08 05:01:18] 2026-03-08 04:00:44,350 | INFO     | --- collectZombieJob: --- 10, [2230803]
[2026-03-08 05:01:18] 2026-03-08 04:00:44,350 | INFO     | zombie collector waiting for pid 2230803
[2026-03-08 05:01:18] 2026-03-08 04:00:44,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 05:01:18] 2026-03-08 04:00:44,350 | INFO     | collected zombie processes
[2026-03-08 05:01:18] 2026-03-08 04:00:44,350 | INFO     | will attempt to kill all subprocesses of pid=2230803
[2026-03-08 05:01:18] 2026-03-08 04:00:44,829 | INFO     | process IDs to be killed: [2230803] (in reverse order)
[2026-03-08 05:01:18] 2026-03-08 04:00:45,012 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 05:01:18] 2026-03-08 04:00:45,013 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 05:01:18] 2026-03-08 04:00:45,026 | INFO     | did not find any defunct processes belonging to 2230803
[2026-03-08 05:01:18] 2026-03-08 04:00:45,038 | INFO     | did not find any defunct processes belonging to 2230803
[2026-03-08 05:01:18] 2026-03-08 04:00:45,038 | INFO     | ready for new job
[2026-03-08 05:01:18] 2026-03-08 04:00:45,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 05:01:18] 2026-03-08 04:00:45,041 | INFO     | **************************************
[2026-03-08 05:01:18] 2026-03-08 04:00:45,041 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 05:01:18] 2026-03-08 04:00:45,041 | INFO     | **************************************
[2026-03-08 05:01:18] 2026-03-08 04:00:45,041 | INFO     | 
[2026-03-08 05:01:18] 2026-03-08 04:00:45,045 | INFO     | architecture information:
[2026-03-08 05:01:18] 2026-03-08 04:00:45,046 | INFO     | executing command: cat /etc/os-release
[2026-03-08 05:01:18] 2026-03-08 04:00:45,064 | INFO     | cat /etc/os-release:
[2026-03-08 05:01:18] NAME="CentOS Linux"
[2026-03-08 05:01:18] VERSION="7 (Core)"
[2026-03-08 05:01:18] ID="centos"
[2026-03-08 05:01:18] ID_LIKE="rhel fedora"
[2026-03-08 05:01:18] VERSION_ID="7"
[2026-03-08 05:01:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 05:01:18] ANSI_COLOR="0;31"
[2026-03-08 05:01:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 05:01:18] HOME_URL="https://www.centos.org/"
[2026-03-08 05:01:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 05:01:18] 
[2026-03-08 05:01:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 05:01:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 05:01:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 05:01:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 05:01:18] 
[2026-03-08 05:01:18] 2026-03-08 04:00:45,064 | INFO     | **************************************
[2026-03-08 05:01:18] 2026-03-08 04:00:45,567 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/1
[2026-03-08 05:01:18] 2026-03-08 04:00:45,589 | INFO     | sufficient remaining disk space (20527972352 B)
[2026-03-08 05:01:18] 2026-03-08 04:00:45,590 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 05:01:18] 2026-03-08 04:00:45,590 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 05:01:18] 2026-03-08 04:00:45,590 | INFO     | update_server=False
[2026-03-08 05:01:18] 2026-03-08 04:00:45,590 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 05:01:18] 2026-03-08 04:00:45,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 05:01:18] 2026-03-08 04:00:45,655 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 05:01:18] 2026-03-08 04:00:45,690 | INFO     | all job control threads have been joined
[2026-03-08 05:01:18] 2026-03-08 04:00:45,955 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 05:01:18] 2026-03-08 04:00:45,955 | INFO     | aborting loop
[2026-03-08 05:01:18] 2026-03-08 04:00:46,443 | INFO     | all data control threads have been joined
[2026-03-08 05:01:18] 2026-03-08 04:00:46,595 | INFO     | [job] retrieve thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:46,641 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:46,695 | INFO     | [job] control thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:46,826 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:46,858 | INFO     | [payload] validate_post thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:46,949 | INFO     | all payload control threads have been joined
[2026-03-08 05:01:18] 2026-03-08 04:00:46,963 | INFO     | [job] job monitor thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,311 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,365 | INFO     | [payload] failed_post thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,448 | INFO     | [data] control thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,660 | INFO     | [data] copytool_out thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,678 | INFO     | [data] copytool_in thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,687 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,954 | INFO     | [payload] control thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:47,958 | INFO     | [job] validate thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:48,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 05:01:18] 2026-03-08 04:00:49,316 | INFO     | [job] queue monitor thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:00:49,596 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 05:01:18] 2026-03-08 04:01:10,767 | INFO     | [monitor] cgroup control has ended
[2026-03-08 05:01:18] 2026-03-08 04:01:12,863 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22527385290560)>', '<ExcThread(monitor, started 22527144634112)>']
[2026-03-08 05:01:18] 2026-03-08 04:01:16,103 | INFO     | PID=2225606 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 05:01:18] 2026-03-08 04:01:16,103 | INFO     | .. there are 14 such processes running
[2026-03-08 05:01:18] 2026-03-08 04:01:16,104 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 05:01:18] 2026-03-08 04:01:16,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 05:01:18] 2026-03-08 04:01:16,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 05:01:18] 2026-03-08 04:01:16,105 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 05:01:18] 2026-03-08 04:01:16,105 | INFO     | [monitor] control thread has ended
[2026-03-08 05:01:18] 2026-03-08 04:01:17,888 | INFO     | all workflow threads have been joined
[2026-03-08 05:01:18] 2026-03-08 04:01:17,888 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 05:01:18] 2026-03-08 04:01:17,888 | INFO     | traces error code: 0
[2026-03-08 05:01:18] 2026-03-08 04:01:17,889 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 05:01:18] 2026-03-08 04:01:18,055 [wrapper] ==== pilot stdout END ====
[2026-03-08 05:01:18] 2026-03-08 04:01:18,058 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 05:01:18] 2026-03-08 04:01:18,077 [wrapper] pilotpid: 2225606
[2026-03-08 05:01:18] 2026-03-08 04:01:18,081 [wrapper] Pilot exit status: 0
[2026-03-08 05:01:18] 2026-03-08 04:01:18,175 [wrapper] pandaids: 7043337888
[2026-03-08 05:01:18] 2026-03-08 04:01:18,265 [wrapper] cleanup supervisor_pilot 2539909 2225607
[2026-03-08 05:01:18] 2026-03-08 04:01:18,273 [wrapper] Test setup, not cleaning
[2026-03-08 05:01:18] 2026-03-08 04:01:18,277 [wrapper] apfmon messages muted
[2026-03-08 05:01:18] 2026-03-08 04:01:18,286 [wrapper] ==== wrapper stdout END ====
[2026-03-08 05:01:18] 2026-03-08 04:01:18,317 [wrapper] ==== wrapper stderr END ====
[2026-03-08 05:01:18]  *** Error codes and diagnostics ***
[2026-03-08 05:01:18]     "exeErrorCode": 0,
[2026-03-08 05:01:18]     "exeErrorDiag": "",
[2026-03-08 05:01:18]     "pilotErrorCode": 0,
[2026-03-08 05:01:18]     "pilotErrorDiag": "",
[2026-03-08 05:01:18]  *** Listing of results directory ***
[2026-03-08 05:01:18] total 402016
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc    584627 Mar  6 17:14 pilot3.tar.gz
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc      5111 Mar  6 17:15 queuedata.json
[2026-03-08 05:01:18] -rwx------. 1 boinc boinc     36322 Mar  6 17:16 runpilot2-wrapper.sh
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc       100 Mar  8 01:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 05:01:18] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 01:04 run_atlas
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc       105 Mar  8 01:04 job.xml
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc      6562 Mar  8 01:04 init_data.xml
[2026-03-08 05:01:18] -rw-r--r--. 2 boinc boinc 211225333 Mar  8 01:04 EVNT.48966985._000456.pool.root.1
[2026-03-08 05:01:18] -rw-r--r--. 2 boinc boinc     15845 Mar  8 01:04 start_atlas.sh
[2026-03-08 05:01:18] drwxrwx--x. 2 boinc boinc      4096 Mar  8 01:04 shared
[2026-03-08 05:01:18] -rw-r--r--. 2 boinc boinc    597972 Mar  8 01:04 input.tar.gz
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc         0 Mar  8 01:04 boinc_lockfile
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc      2592 Mar  8 01:04 pandaJob.out
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc    999177 Mar  8 01:04 agis_schedconf.cvmfs.json
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc       448 Mar  8 01:04 workernode_map.json
[2026-03-08 05:01:18] drwx------. 5 boinc boinc      4096 Mar  8 01:04 pilot3
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc 191685644 Mar  8 04:59 HITS.48966988._011361.pool.root.1
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc       530 Mar  8 05:00 boinc_task_state.xml
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc      1033 Mar  8 05:00 memory_monitor_summary.json
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc   1521291 Mar  8 05:00 agis_ddmendpoints.agis.ALL.json
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc    414373 Mar  8 05:00 log.48966988._011361.job.log.tgz.1
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc      6402 Mar  8 05:00 heartbeat.json
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc      8192 Mar  8 05:00 boinc_mmap_file
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc        28 Mar  8 05:00 wrapper_checkpoint.txt
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc        95 Mar  8 05:01 pilot_heartbeat.json
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc      4829 Mar  8 05:01 pilotlog.txt
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc   1990617 Mar  8 05:01 log.48966988._011361.job.log.1
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc       357 Mar  8 05:01 output.list
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc       620 Mar  8 05:01 runtime_log
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc   2426880 Mar  8 05:01 result.tar.gz
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc      9205 Mar  8 05:01 runtime_log.err
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc       665 Mar  8 05:01 D7FODmk1mI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLtSLDmPlMWym.diag
[2026-03-08 05:01:18] -rw-r--r--. 1 boinc boinc     20866 Mar  8 05:01 stderr.txt
[2026-03-08 05:01:18] HITS file was successfully produced:
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc 191685644 Mar  8 04:59 shared/HITS.pool.root.1
[2026-03-08 05:01:18]  *** Contents of shared directory: ***
[2026-03-08 05:01:18] total 396452
[2026-03-08 05:01:18] -rw-r--r--. 2 boinc boinc 211225333 Mar  8 01:04 ATLAS.root_0
[2026-03-08 05:01:18] -rw-r--r--. 2 boinc boinc     15845 Mar  8 01:04 start_atlas.sh
[2026-03-08 05:01:18] -rw-r--r--. 2 boinc boinc    597972 Mar  8 01:04 input.tar.gz
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc 191685644 Mar  8 04:59 HITS.pool.root.1
[2026-03-08 05:01:18] -rw-------. 1 boinc boinc   2426880 Mar  8 05:01 result.tar.gz
05:01:20 (2221448): run_atlas exited; CPU time 53500.824694
05:01:20 (2221448): called boinc_finish(0)

</stderr_txt>
]]>

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