Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-07 01:55:19 (2620): vboxwrapper version 26210
2026-03-07 01:55:19 (2620): BOINC client version: 8.2.8
2026-03-07 01:55:20 (2620): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2026-03-07 01:55:20 (2620): Successfully copied 'init_data.xml' to the shared directory.
2026-03-07 01:55:20 (2620): Create VM. (boinc_56eb52aab61a8ee8, slot#1)
2026-03-07 01:55:21 (2620): Setting Memory Size for VM. (4400MB)
2026-03-07 01:55:21 (2620): Setting CPU Count for VM. (4)
2026-03-07 01:55:21 (2620): Setting Chipset Options for VM.
2026-03-07 01:55:22 (2620): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-07 01:55:22 (2620): Setting Boot Options for VM.
2026-03-07 01:55:22 (2620): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-07 01:55:23 (2620): Enabling VM Network Access.
2026-03-07 01:55:23 (2620): Disabling USB Support for VM.
2026-03-07 01:55:23 (2620): Disabling COM Port Support for VM.
2026-03-07 01:55:23 (2620): Disabling LPT Port Support for VM.
2026-03-07 01:55:24 (2620): Disabling Audio Support for VM.
2026-03-07 01:55:24 (2620): Disabling Clipboard Support for VM.
2026-03-07 01:55:24 (2620): Disabling Drag and Drop Support for VM.
2026-03-07 01:55:24 (2620): Adding storage controller(s) to VM.
2026-03-07 01:55:25 (2620): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-07 01:55:27 (2620): Adding VirtualBox Guest Additions to VM.
2026-03-07 01:55:27 (2620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-07 01:55:27 (2620): forwarding host port 54694 to guest port 80
2026-03-07 01:55:28 (2620): Enabling remote desktop for VM.
2026-03-07 01:55:28 (2620): Required extension pack not installed, remote desktop not enabled.
2026-03-07 01:55:28 (2620): Enabling shared directory for VM.
2026-03-07 01:55:28 (2620): Starting VM using VBoxManage interface. (boinc_56eb52aab61a8ee8, slot#1)
2026-03-07 01:55:35 (2620): Successfully started VM. (PID = '2768')
2026-03-07 01:55:35 (2620): Reporting VM Process ID to BOINC.
2026-03-07 01:55:35 (2620): Guest Log: BIOS: VirtualBox 7.0.6
2026-03-07 01:55:35 (2620): Guest Log: CPUID EDX: 0x178bfbff
2026-03-07 01:55:35 (2620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-07 01:55:35 (2620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-07 01:55:35 (2620): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-07 01:55:35 (2620): Detected: Web Application Enabled (http://localhost:54694)
2026-03-07 01:55:35 (2620): Preference change detected
2026-03-07 01:55:35 (2620): Setting CPU throttle for VM. (100%)
2026-03-07 01:55:35 (2620): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-07 01:55:37 (2620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-07 01:55:37 (2620): Guest Log: BIOS: Booting from Hard Disk...
2026-03-07 01:55:40 (2620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-07 01:55:40 (2620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-07 01:55:40 (2620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-07 01:55:45 (2620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-07 01:55:45 (2620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-07 01:55:52 (2620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.000141 main     Log opened 2026-03-07T01:55:49.667794000Z
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.000238 main     OS Product: Linux
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.000273 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.000322 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.000360 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.000361 main     Process ID: 1302
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.000362 main     Package type: LINUX_64BITS_GENERIC
2026-03-07 01:55:52 (2620): Guest Log: 00:00:00.001974 main     5.2.32 r132073 started. Verbose level = 0
2026-03-07 01:55:52 (2620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-07 01:55:52 (2620): Guest Log: [INFO] Mounting shared directory
2026-03-07 01:55:52 (2620): Guest Log: [INFO] Checking for init_data.xml
2026-03-07 01:55:55 (2620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-07 01:55:55 (2620): Guest Log: [INFO] Detected branch: prod
2026-03-07 01:55:55 (2620): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-07 01:55:55 (2620): Guest Log: Copying input files
2026-03-07 01:55:56 (2620): Guest Log: Copied input files into RunAtlas.
2026-03-07 01:55:56 (2620): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-03-07 01:55:56 (2620): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-03-07 01:55:56 (2620): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-03-07 01:55:56 (2620): Guest Log: Further information can be found at the LHC@home message board.
2026-03-07 01:56:02 (2620): Guest Log: 00:00:10.025809 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 534 386 000ns (GuestNow=1 772 844 961 137 023 000 ns GuestLast=1 772 848 549 671 409 000 ns fSetTimeLastLoop=true )
2026-03-07 01:56:55 (2620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-07 01:56:55 (2620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-07 01:56:55 (2620): Guest Log: 2.6.3.0 1579 1 32188 156978 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-03-07 01:56:55 (2620): Guest Log: copied the webapp to /var/www
2026-03-07 01:56:55 (2620): Guest Log: ATHENA_PROC_NUMBER=4
2026-03-07 01:56:55 (2620): Guest Log: ATHENA_CORE_NUMBER=4
2026-03-07 01:56:56 (2620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-07 01:56:56 (2620): Guest Log:  *** Starting ATLAS job. (PandaID=7043368890 taskID=48967059) ***
2026-03-07 03:40:19 (2620): Status Report: Elapsed Time: '6000.505346'
2026-03-07 03:40:19 (2620): Status Report: CPU Time: '23472.453125'
2026-03-07 05:25:27 (2620): Status Report: Elapsed Time: '12000.823631'
2026-03-07 05:25:27 (2620): Status Report: CPU Time: '48662.703125'
2026-03-07 07:08:38 (2620): Status Report: Elapsed Time: '18001.310593'
2026-03-07 07:08:38 (2620): Status Report: CPU Time: '73358.250000'
2026-03-07 08:51:35 (2620): Status Report: Elapsed Time: '24001.686064'
2026-03-07 08:51:35 (2620): Status Report: CPU Time: '97954.046875'
2026-03-07 10:35:46 (2620): Status Report: Elapsed Time: '30002.416786'
2026-03-07 10:35:46 (2620): Status Report: CPU Time: '122851.937500'
2026-03-07 11:05:14 (2620): Guest Log:  *** Job finished ***
2026-03-07 11:05:14 (2620): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:04:28,917 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:04:32,920 | INFO     | [data] queue_monitor thread has finished
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:08,218 | INFO     | [monitor] cgroup control has ended
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:08,411 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953737078592)>', '<ExcThread(monitor, started 139952675333888)>']
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:08,795 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:08,795 | INFO     | [monitor] control thread has ended
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,417 | INFO     | all workflow threads have been joined
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,417 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,417 | INFO     | traces error code: 0
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,513 [wrapper] ==== pilot stdout END ====
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,517 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,521 [wrapper] pilotpid: 5991
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,526 [wrapper] Pilot exit status: 0
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,582 [wrapper] pandaids: 7043368890
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,624 [wrapper] cleanup supervisor_pilot  1526 5992
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,634 [wrapper] Test setup, not cleaning
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,640 [wrapper] apfmon messages muted
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,645 [wrapper] ==== wrapper stdout END ====
2026-03-07 11:05:14 (2620): Guest Log: 2026-03-07 10:05:13,661 [wrapper] ==== wrapper stderr END ====
2026-03-07 11:05:14 (2620): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 11:05:14 (2620): Guest Log:     "exeErrorCode": 0,
2026-03-07 11:05:14 (2620): Guest Log:     "exeErrorDiag": "",
2026-03-07 11:05:14 (2620): Guest Log:     "pilotErrorCode": 0,
2026-03-07 11:05:14 (2620): Guest Log:     "pilotErrorDiag": "",
2026-03-07 11:05:14 (2620): Guest Log:  *** Listing of results directory ***
2026-03-07 11:05:14 (2620): Guest Log: total 260792
2026-03-07 11:05:14 (2620): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 16:14 pilot3.tar.gz
2026-03-07 11:05:14 (2620): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 16:14 runpilot2-wrapper.sh
2026-03-07 11:05:14 (2620): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 16:15 queuedata.json
2026-03-07 11:05:14 (2620): Guest Log: -rwxr-xr-x. 1 atlas atlas      9037 Mar  7 00:55 init_data.xml
2026-03-07 11:05:14 (2620): Guest Log: -rwxr-xr-x. 1 atlas atlas    597939 Mar  7 00:55 input.tar.gz
2026-03-07 11:05:14 (2620): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Mar  7 00:55 start_atlas.sh
2026-03-07 11:05:14 (2620): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  7 00:55 EVNT.48967057._000059.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 11:05:14 (2620): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Mar  7 00:56 pandaJob.out
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas    999186 Mar  7 00:57 agis_schedconf.cvmfs.json
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas       427 Mar  7 00:57 workernode_map.json
2026-03-07 11:05:14 (2620): Guest Log: drwx------. 5 atlas atlas      4096 Mar  7 00:57 pilot3
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas        95 Mar  7 10:03 pilot_heartbeat.json
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas 252855502 Mar  7 10:03 HITS.48967059._000795.pool.root.1
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas      1029 Mar  7 10:04 memory_monitor_summary.json
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  7 10:04 agis_ddmendpoints.agis.ALL.json
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas    659512 Mar  7 10:04 log.48967059._000795.job.log.tgz.1
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas      6370 Mar  7 10:04 heartbeat.json
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas      4608 Mar  7 10:05 pilotlog.txt
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas   4505490 Mar  7 10:05 log.48967059._000795.job.log.1
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas       357 Mar  7 10:05 output.list
2026-03-07 11:05:14 (2620): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  7 10:05 runtime_log
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas   5181440 Mar  7 10:05 result.tar.gz
2026-03-07 11:05:14 (2620): Guest Log: -rw-r--r--. 1 atlas atlas      8767 Mar  7 10:05 runtime_log.err
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas       664 Mar  7 10:05 0xgKDm5zmI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmldQLDmO1TTon.diag
2026-03-07 11:05:14 (2620): Guest Log: Looking for outputfile HITS.48967059._000795.pool.root.1
2026-03-07 11:05:14 (2620): Guest Log: HITS file was successfully produced
2026-03-07 11:05:14 (2620): Guest Log: -rw-------. 1 atlas atlas 252855502 Mar  7 10:03 /home/atlas/RunAtlas/HITS.48967059._000795.pool.root.1
2026-03-07 11:05:15 (2620): Guest Log: Successfully finished the ATLAS job!
2026-03-07 11:05:15 (2620): Guest Log: Copying the results back to the shared directory!
2026-03-07 11:05:15 (2620): Guest Log:  *** Contents of shared directory: ***
2026-03-07 11:05:15 (2620): Guest Log: total 476756
2026-03-07 11:05:15 (2620): Guest Log: -rwxrwxrwx. 1 root root 229530059 Mar  7 00:55 ATLAS.root_0
2026-03-07 11:05:15 (2620): Guest Log: -rwxrwxrwx. 1 root root 252855502 Mar  7 10:05 HITS.pool.root.1
2026-03-07 11:05:15 (2620): Guest Log: -rwxrwxrwx. 1 root root      9037 Mar  7 00:55 init_data.xml
2026-03-07 11:05:15 (2620): Guest Log: -rwxrwxrwx. 1 root root    597939 Mar  6 19:45 input.tar.gz
2026-03-07 11:05:15 (2620): Guest Log: -rwxrwxrwx. 1 root root   5181440 Mar  7  2026 result.tar.gz
2026-03-07 11:05:15 (2620): Guest Log: -rwxrwxrwx. 1 root root     15845 Mar  6 19:45 start_atlas.sh
2026-03-07 11:05:15 (2620): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 11:05:15 (2620): VM Completion File Detected.
2026-03-07 11:05:15 (2620): Powering off VM.
2026-03-07 11:05:16 (2620): Successfully stopped VM.
2026-03-07 11:05:16 (2620): Deregistering VM. (boinc_56eb52aab61a8ee8, slot#1)
2026-03-07 11:05:16 (2620): Removing network bandwidth throttle group from VM.
2026-03-07 11:05:16 (2620): Removing VM from VirtualBox.
2026-03-07 11:05:21 (2620): called boinc_finish(0)

</stderr_txt>
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