Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:21:21 (189670): wrapper (7.7.26015): starting
12:21:21 (189670): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 12:21:21] Arguments: --nthreads 4
[2026-03-08 12:21:21] Threads: 4
[2026-03-08 12:21:21] Checking for CVMFS
[2026-03-08 12:21:21] No cvmfs_config command found, will try listing directly
[2026-03-08 12:21:21] CVMFS is ok
[2026-03-08 12:21:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 12:21:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 12:21:21] Further information can be found at the LHC@home message board.
[2026-03-08 12:21:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 12:21:21] Checking for apptainer binary...
[2026-03-08 12:21:21] which: no apptainer in ((null))
[2026-03-08 12:21:21] apptainer is not installed, using version from CVMFS
[2026-03-08 12:21:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 12:21:21] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot236/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut20.grid.cesnet.cz
[2026-03-08 12:21:21] apptainer works
[2026-03-08 12:21:21] Set ATHENA_PROC_NUMBER=4
[2026-03-08 12:21:21] Set ATHENA_CORE_NUMBER=4
[2026-03-08 12:21:21] Starting ATLAS job with PandaID=7043339386
[2026-03-08 12:21:21] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot236/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 14:06:52]  *** The last 200 lines of the pilot log: ***
[2026-03-08 14:06:52] 2026-03-08 13:05:59,147 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 14:06:52] 2026-03-08 13:05:59,147 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 14:06:52] 2026-03-08 13:05:59,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 14:06:52] 2026-03-08 13:05:59,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 14:06:52] 2026-03-08 13:05:59,148 | INFO     | fitting pss+swap vs Time
[2026-03-08 14:06:52] 2026-03-08 13:05:59,148 | INFO     | sum of square deviations: 338804492.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | sum of deviations: 1624680344.000001
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | mean x: 1772972027.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | mean y: 2285343.9611650486
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | intersect: -8499705836.039892
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | chi2: 1.9344306325605505
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | sum of square deviations: 291817564.5
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | sum of deviations: 7815341746.500001
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | mean x: 1772971874.5
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | mean y: 2304608.663265306
[2026-03-08 14:06:52] 2026-03-08 13:05:59,149 | INFO     | intersect: -47480721746.832924
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | chi2: 1.1103145533605079
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | current chi2=1.1103145533605079 (change=42.60251390401028 %)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | sum of square deviations: 249388862.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | sum of deviations: 7439839502.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | mean x: 1772971722.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | mean y: 2303257.8494623657
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | intersect: -52889493703.25365
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | chi2: 1.1125603068239605
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | current chi2=1.1125603068239605 (change=-0.20226281432189763 %)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | right removable region: 92
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | sum of square deviations: 291817564.5
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | sum of deviations: -7805460417.499999
[2026-03-08 14:06:52] 2026-03-08 13:05:59,150 | INFO     | mean x: 1772972179.5
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | mean y: 2314961.4183673467
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | intersect: 47425314300.50014
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | chi2: 0.8600749763570451
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | current chi2=0.8600749763570451 (change=55.538598185938135 %)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | sum of square deviations: 249388862.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | sum of deviations: -7372235703.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | mean x: 1772972332.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | mean y: 2313404.5268817204
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | intersect: 52413515017.85943
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | chi2: 0.8614714226661574
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | current chi2=0.8614714226661574 (change=-0.16236332267532183 %)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | left removable region: 20
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | sum of square deviations: 115715658.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | sum of deviations: -797448120.0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | mean x: 1772972301.5
[2026-03-08 14:06:52] 2026-03-08 13:05:59,151 | INFO     | mean y: 2334435.5
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | intersect: 12220675955.393948
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | chi2: 0.0009456231120683929
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | current memory leak: -6.89 B/s (using 72 data points, chi2=0.00)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | could have reported an average CPU frequency of 3581 MHz (7 samples)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | ..............................
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . Timing measurements:
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . get job = 0 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . initial setup = 5 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . payload setup = 5 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . stage-in = 0 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . payload execution = 6241 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . stage-out = 0 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | . log creation = 0 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,152 | INFO     | ..............................
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | 
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | job summary report
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | --------------------------------------------------
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | PanDA job id: 7043339386
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | task id: 48966988
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | errors: (none)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | pilot state: finished 
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | transexitcode: 0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | exeerrorcode: 0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | exeerrordiag: 
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | exitcode: 0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | exitmsg: OK
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | cpuconsumptiontime: 23866 s
[2026-03-08 14:06:52] 2026-03-08 13:05:59,205 | INFO     | nevents: 400
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | neventsw: 0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | pid: 201954
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | pgrp: 201954
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | corecount: 4
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | event service: False
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | sizes: {0: 2295425, 1: 2295886, 11: 2295886, 6251: 2322971, 6252: 2332049, 6254: 2332187}
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | --------------------------------------------------
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | 
[2026-03-08 14:06:52] 2026-03-08 13:05:59,206 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot236/slots/0
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,228 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 14:06:52] 2026-03-08 13:05:59,229 | INFO     | job 7043339386 has completed (purged errors)
[2026-03-08 14:06:52] 2026-03-08 13:05:59,229 | INFO     | overall cleanup function is called
[2026-03-08 14:06:52] 2026-03-08 13:06:00,235 | INFO     | --- collectZombieJob: --- 10, [201954]
[2026-03-08 14:06:52] 2026-03-08 13:06:00,235 | INFO     | zombie collector waiting for pid 201954
[2026-03-08 14:06:52] 2026-03-08 13:06:00,235 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 14:06:52] 2026-03-08 13:06:00,235 | INFO     | collected zombie processes
[2026-03-08 14:06:52] 2026-03-08 13:06:00,235 | INFO     | will attempt to kill all subprocesses of pid=201954
[2026-03-08 14:06:52] 2026-03-08 13:06:01,523 | WARNING  | process 201954 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 14:06:52] 2026-03-08 13:06:01,653 | INFO     | process IDs to be killed: [201954] (in reverse order)
[2026-03-08 14:06:52] 2026-03-08 13:06:01,898 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 14:06:52] 2026-03-08 13:06:01,898 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 14:06:52] 2026-03-08 13:06:01,985 | INFO     | did not find any defunct processes belonging to 201954
[2026-03-08 14:06:52] 2026-03-08 13:06:02,006 | INFO     | using path: /var/lib/boinc/var/slot236/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 14:06:52] 2026-03-08 13:06:02,036 | INFO     | did not find any defunct processes belonging to 201954
[2026-03-08 14:06:52] 2026-03-08 13:06:02,036 | INFO     | ready for new job
[2026-03-08 14:06:52] 2026-03-08 13:06:02,036 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 14:06:52] 2026-03-08 13:06:02,038 | INFO     | **************************************
[2026-03-08 14:06:52] 2026-03-08 13:06:02,038 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 14:06:52] 2026-03-08 13:06:02,038 | INFO     | **************************************
[2026-03-08 14:06:52] 2026-03-08 13:06:02,038 | INFO     | 
[2026-03-08 14:06:52] 2026-03-08 13:06:02,047 | INFO     | architecture information:
[2026-03-08 14:06:52] 2026-03-08 13:06:02,047 | INFO     | executing command: cat /etc/os-release
[2026-03-08 14:06:52] 2026-03-08 13:06:02,064 | INFO     | cat /etc/os-release:
[2026-03-08 14:06:52] NAME="CentOS Linux"
[2026-03-08 14:06:52] VERSION="7 (Core)"
[2026-03-08 14:06:52] ID="centos"
[2026-03-08 14:06:52] ID_LIKE="rhel fedora"
[2026-03-08 14:06:52] VERSION_ID="7"
[2026-03-08 14:06:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 14:06:52] ANSI_COLOR="0;31"
[2026-03-08 14:06:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 14:06:52] HOME_URL="https://www.centos.org/"
[2026-03-08 14:06:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 14:06:52] 
[2026-03-08 14:06:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 14:06:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 14:06:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 14:06:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 14:06:52] 
[2026-03-08 14:06:52] 2026-03-08 13:06:02,064 | INFO     | **************************************
[2026-03-08 14:06:52] 2026-03-08 13:06:02,498 | INFO     | number of running child processes to parent process 201954: 1
[2026-03-08 14:06:52] 2026-03-08 13:06:02,498 | INFO     | maximum number of monitored processes: 6
[2026-03-08 14:06:52] 2026-03-08 13:06:02,498 | INFO     | aborting job monitoring since job object (job id=7043339386) has expired
[2026-03-08 14:06:52] 2026-03-08 13:06:02,569 | INFO     | executing command: df -mP /var/lib/boinc/var/slot236/slots/0
[2026-03-08 14:06:52] 2026-03-08 13:06:02,583 | INFO     | sufficient remaining disk space (20422066176 B)
[2026-03-08 14:06:52] 2026-03-08 13:06:02,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 14:06:52] 2026-03-08 13:06:02,584 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 14:06:52] 2026-03-08 13:06:02,584 | INFO     | update_server=False
[2026-03-08 14:06:52] 2026-03-08 13:06:02,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 14:06:52] 2026-03-08 13:06:02,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 14:06:52] 2026-03-08 13:06:02,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:06:52] 2026-03-08 13:06:02,584 | INFO     | will abort loop
[2026-03-08 14:06:52] 2026-03-08 13:06:02,928 | INFO     | all job control threads have been joined
[2026-03-08 14:06:52] 2026-03-08 13:06:03,227 | INFO     | all payload control threads have been joined
[2026-03-08 14:06:52] 2026-03-08 13:06:03,275 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 14:06:52] 2026-03-08 13:06:03,342 | INFO     | all data control threads have been joined
[2026-03-08 14:06:52] 2026-03-08 13:06:03,589 | INFO     | [job] retrieve thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:03,589 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:03,590 | INFO     | [job] job monitor thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:03,639 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:03,684 | INFO     | [payload] failed_post thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:03,933 | INFO     | [job] control thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:04,216 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:06:52] 2026-03-08 13:06:04,232 | INFO     | [payload] control thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:04,350 | INFO     | [data] control thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:04,589 | INFO     | [data] copytool_out thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:04,629 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:04,743 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:04,783 | INFO     | [job] validate thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:04,958 | INFO     | [data] copytool_in thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:05,181 | INFO     | [payload] validate_post thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:05,221 | INFO     | [job] queue monitor thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:07,280 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 14:06:52] 2026-03-08 13:06:28,832 [wrapper] supervise_pilot (15 min periods counter: 8)
[2026-03-08 14:06:52] 2026-03-08 13:06:31,045 | INFO     | PID=194274 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 14:06:52] 2026-03-08 13:06:31,045 | INFO     | .. there are 51 such processes running
[2026-03-08 14:06:52] 2026-03-08 13:06:31,045 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 14:06:52] 2026-03-08 13:06:31,045 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 14:06:52] 2026-03-08 13:06:31,045 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 14:06:52] 2026-03-08 13:06:44,554 | INFO     | [monitor] cgroup control has ended
[2026-03-08 14:06:52] 2026-03-08 13:06:46,568 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22595141961536)>', '<ExcThread(monitor, started 22594901518080)>']
[2026-03-08 14:06:52] 2026-03-08 13:06:47,133 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 14:06:52] 2026-03-08 13:06:47,133 | INFO     | [monitor] control thread has ended
[2026-03-08 14:06:52] 2026-03-08 13:06:51,593 | INFO     | all workflow threads have been joined
[2026-03-08 14:06:52] 2026-03-08 13:06:51,593 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 14:06:52] 2026-03-08 13:06:51,593 | INFO     | traces error code: 0
[2026-03-08 14:06:52] 2026-03-08 13:06:51,593 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 14:06:52] 2026-03-08 13:06:51,815 [wrapper] ==== pilot stdout END ====
[2026-03-08 14:06:52] 2026-03-08 13:06:51,817 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 14:06:52] 2026-03-08 13:06:51,819 [wrapper] pilotpid: 194274
[2026-03-08 14:06:52] 2026-03-08 13:06:51,820 [wrapper] Pilot exit status: 0
[2026-03-08 14:06:52] 2026-03-08 13:06:51,826 [wrapper] pandaids: 7043339386
[2026-03-08 14:06:52] 2026-03-08 13:06:51,954 [wrapper] cleanup supervisor_pilot 1157140 194275
[2026-03-08 14:06:52] 2026-03-08 13:06:51,958 [wrapper] Test setup, not cleaning
[2026-03-08 14:06:52] 2026-03-08 13:06:51,961 [wrapper] apfmon messages muted
[2026-03-08 14:06:52] 2026-03-08 13:06:51,963 [wrapper] ==== wrapper stdout END ====
[2026-03-08 14:06:52] 2026-03-08 13:06:51,966 [wrapper] ==== wrapper stderr END ====
[2026-03-08 14:06:52]  *** Error codes and diagnostics ***
[2026-03-08 14:06:52]     "exeErrorCode": 0,
[2026-03-08 14:06:52]     "exeErrorDiag": "",
[2026-03-08 14:06:52]     "pilotErrorCode": 0,
[2026-03-08 14:06:52]     "pilotErrorDiag": "",
[2026-03-08 14:06:52]  *** Listing of results directory ***
[2026-03-08 14:06:52] total 410020
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc      5111 Mar  6 17:13 queuedata.json
[2026-03-08 14:06:52] -rwx------. 1 boinc boinc     36322 Mar  6 17:14 runpilot2-wrapper.sh
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc    584627 Mar  6 17:14 pilot3.tar.gz
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc       100 Mar  8 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 14:06:52] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 12:21 run_atlas
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc       105 Mar  8 12:21 job.xml
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc      6708 Mar  8 12:21 init_data.xml
[2026-03-08 14:06:52] -rw-r--r--. 2 boinc boinc 213399719 Mar  8 12:21 EVNT.48966985._000464.pool.root.1
[2026-03-08 14:06:52] -rw-r--r--. 2 boinc boinc     15845 Mar  8 12:21 start_atlas.sh
[2026-03-08 14:06:52] drwxrwx--x. 2 boinc boinc      4096 Mar  8 12:21 shared
[2026-03-08 14:06:52] -rw-r--r--. 2 boinc boinc    597957 Mar  8 12:21 input.tar.gz
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc         0 Mar  8 12:21 boinc_lockfile
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc      2592 Mar  8 12:21 pandaJob.out
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc    999177 Mar  8 12:21 agis_schedconf.cvmfs.json
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc   1521291 Mar  8 12:21 agis_ddmendpoints.agis.ALL.json
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc       445 Mar  8 12:21 workernode_map.json
[2026-03-08 14:06:52] drwx------. 5 boinc boinc      4096 Mar  8 12:21 pilot3
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc 200146405 Mar  8 14:05 HITS.48966988._011545.pool.root.1
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc      1032 Mar  8 14:05 memory_monitor_summary.json
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc    285009 Mar  8 14:05 log.48966988._011545.job.log.tgz.1
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc      6353 Mar  8 14:05 heartbeat.json
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc       529 Mar  8 14:05 boinc_task_state.xml
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc      8192 Mar  8 14:06 boinc_mmap_file
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc        27 Mar  8 14:06 wrapper_checkpoint.txt
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc        95 Mar  8 14:06 pilot_heartbeat.json
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc      5119 Mar  8 14:06 pilotlog.txt
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc    903855 Mar  8 14:06 log.48966988._011545.job.log.1
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc       357 Mar  8 14:06 output.list
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc       620 Mar  8 14:06 runtime_log
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc   1208320 Mar  8 14:06 result.tar.gz
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc      9221 Mar  8 14:06 runtime_log.err
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc       663 Mar  8 14:06 UmwLDmmzmI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmrZQLDmbL7okn.diag
[2026-03-08 14:06:52] -rw-r--r--. 1 boinc boinc     20824 Mar  8 14:06 stderr.txt
[2026-03-08 14:06:52] HITS file was successfully produced:
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc 200146405 Mar  8 14:05 shared/HITS.pool.root.1
[2026-03-08 14:06:52]  *** Contents of shared directory: ***
[2026-03-08 14:06:52] total 405644
[2026-03-08 14:06:52] -rw-r--r--. 2 boinc boinc 213399719 Mar  8 12:21 ATLAS.root_0
[2026-03-08 14:06:52] -rw-r--r--. 2 boinc boinc     15845 Mar  8 12:21 start_atlas.sh
[2026-03-08 14:06:52] -rw-r--r--. 2 boinc boinc    597957 Mar  8 12:21 input.tar.gz
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc 200146405 Mar  8 14:05 HITS.pool.root.1
[2026-03-08 14:06:52] -rw-------. 1 boinc boinc   1208320 Mar  8 14:06 result.tar.gz
14:06:53 (189670): run_atlas exited; CPU time 24160.218900
14:06:53 (189670): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN