Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:50:42 (548992): wrapper (7.7.26015): starting
12:50:42 (548992): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 12:50:42] Arguments: --nthreads 4
[2026-03-08 12:50:42] Threads: 4
[2026-03-08 12:50:42] Checking for CVMFS
[2026-03-08 12:50:42] No cvmfs_config command found, will try listing directly
[2026-03-08 12:50:42] CVMFS is ok
[2026-03-08 12:50:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 12:50:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 12:50:42] Further information can be found at the LHC@home message board.
[2026-03-08 12:50:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 12:50:42] Checking for apptainer binary...
[2026-03-08 12:50:42] which: no apptainer in ((null))
[2026-03-08 12:50:42] apptainer is not installed, using version from CVMFS
[2026-03-08 12:50:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 12:50:42] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2026-03-08 12:50:42] apptainer works
[2026-03-08 12:50:42] Set ATHENA_PROC_NUMBER=4
[2026-03-08 12:50:42] Set ATHENA_CORE_NUMBER=4
[2026-03-08 12:50:42] Starting ATLAS job with PandaID=7043339473
[2026-03-08 12:50:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 14:28:11]  *** The last 200 lines of the pilot log: ***
[2026-03-08 14:28:11]  lfn=log.48966988._011632.job.log.tgz.1
[2026-03-08 14:28:11]  mtime=0
[2026-03-08 14:28:11]  protocol_id=None
[2026-03-08 14:28:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 14:28:11]  replicas=None
[2026-03-08 14:28:11]  scope=mc23_13p6TeV
[2026-03-08 14:28:11]  status=None
[2026-03-08 14:28:11]  status_code=0
[2026-03-08 14:28:11]  storage_token=
[2026-03-08 14:28:11]  surl=/var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043339473/log.48966988._011632.job.log.tgz.1
[2026-03-08 14:28:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/c8/log.48966988._011632.job.log.tgz.1
[2026-03-08 14:28:11]  workdir=None
[2026-03-08 14:28:11] ]
[2026-03-08 14:28:11] 2026-03-08 13:27:18,716 | INFO     | transferring file log.48966988._011632.job.log.tgz.1 from /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043339473/log.48966988._011632.job.log.tgz.1 to /var/lib/
[2026-03-08 14:28:11] 2026-03-08 13:27:18,716 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043339473/log.48966988._011632.job.log.tgz.1 /var/lib/boinc/var/slot128/slots/0/
[2026-03-08 14:28:11] 2026-03-08 13:27:18,733 | INFO     | adding to output.list: log.48966988._011632.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/65/c8/log.48966988._011632.job.log.tg
[2026-03-08 14:28:11] 2026-03-08 13:27:18,733 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 14:28:11] 2026-03-08 13:27:18,733 | INFO     | summary of transferred files:
[2026-03-08 14:28:11] 2026-03-08 13:27:18,733 | INFO     |  -- lfn=log.48966988._011632.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 14:28:11] 2026-03-08 13:27:18,733 | INFO     | stage-out finished correctly
[2026-03-08 14:28:11] 2026-03-08 13:27:19,918 | INFO     | PID=555863 has CPU usage=14.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 14:28:11] 2026-03-08 13:27:19,918 | INFO     | .. there are 48 such processes running
[2026-03-08 14:28:11] 2026-03-08 13:27:20,918 | INFO     | time since job start (5786s) is within the limit (349056.0s)
[2026-03-08 14:28:11] 2026-03-08 13:27:21,030 | INFO     | monitor loop #419: job 0:7043339473 is in state 'finished'
[2026-03-08 14:28:11] 2026-03-08 13:27:21,030 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 14:28:11] 2026-03-08 13:27:22,278 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 14:28:11] 2026-03-08 13:27:22,927 | INFO     | time since job start (5788s) is within the limit (349056.0s)
[2026-03-08 14:28:11] 2026-03-08 13:27:23,533 | INFO     | monitor loop #420: job 0:7043339473 is in state 'finished'
[2026-03-08 14:28:11] 2026-03-08 13:27:23,533 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 14:28:11] 2026-03-08 13:27:23,996 | INFO     | job 7043339473 has state=finished
[2026-03-08 14:28:11] 2026-03-08 13:27:23,997 | INFO     | preparing for final server update for job 7043339473 in state='finished'
[2026-03-08 14:28:11] 2026-03-08 13:27:23,997 | INFO     | reading metadata from: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043339473/jobReport.json
[2026-03-08 14:28:11] 2026-03-08 13:27:23,998 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot128/slots/0/workernode_map.json
[2026-03-08 14:28:11] 2026-03-08 13:27:23,998 | INFO     | this job has now completed (state=finished)
[2026-03-08 14:28:11] 2026-03-08 13:27:23,998 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 14:28:11] 2026-03-08 13:27:23,998 | INFO     | log transfer has been attempted: DONE
[2026-03-08 14:28:11] 2026-03-08 13:27:23,998 | INFO     | job 7043339473 has finished - writing final server update
[2026-03-08 14:28:11] 2026-03-08 13:27:23,999 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_6935/.job.ad'
[2026-03-08 14:28:11] 2026-03-08 13:27:23,999 | INFO     | total number of processed events: 400 (read)
[2026-03-08 14:28:11] 2026-03-08 13:27:24,021 | INFO     | using path: /var/lib/boinc/var/slot128/slots/0/PanDA_Pilot-7043339473/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 14:28:11] 2026-03-08 13:27:24,021 | INFO     | extracted standard info from prmon json
[2026-03-08 14:28:11] 2026-03-08 13:27:24,021 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 14:28:11] 2026-03-08 13:27:24,021 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 14:28:11] 2026-03-08 13:27:24,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 14:28:11] 2026-03-08 13:27:24,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 14:28:11] 2026-03-08 13:27:24,022 | INFO     | fitting pss+swap vs Time
[2026-03-08 14:28:11] 2026-03-08 13:27:24,022 | INFO     | sum of square deviations: 211285822.0
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | sum of deviations: 442676237.50000006
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | mean x: 1772973633.5
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | mean y: 2322559.4204545454
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | intersect: -3712329421.6504
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | chi2: 0.00033188497554197333
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | current memory leak: 2.10 B/s (using 88 data points, chi2=0.00)
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | could have reported an average CPU frequency of 3606 MHz (7 samples)
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | ..............................
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . Timing measurements:
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . get job = 0 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . initial setup = 4 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . payload setup = 4 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . stage-in = 0 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . payload execution = 5764 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . stage-out = 0 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | . log creation = 0 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,023 | INFO     | ..............................
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | 
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | job summary report
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | --------------------------------------------------
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | PanDA job id: 7043339473
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | task id: 48966988
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | errors: (none)
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | pilot state: finished 
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | transexitcode: 0
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | exeerrorcode: 0
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | exeerrordiag: 
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | exitcode: 0
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | exitmsg: OK
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | cpuconsumptiontime: 22271 s
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | nevents: 400
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | neventsw: 0
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | pid: 567927
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | pgrp: 567927
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | corecount: 4
[2026-03-08 14:28:11] 2026-03-08 13:27:24,066 | INFO     | event service: False
[2026-03-08 14:28:11] 2026-03-08 13:27:24,067 | INFO     | sizes: {0: 2295858, 10: 2295858, 5773: 2331585, 5777: 2331585, 5779: 2331779}
[2026-03-08 14:28:11] 2026-03-08 13:27:24,067 | INFO     | --------------------------------------------------
[2026-03-08 14:28:11] 2026-03-08 13:27:24,067 | INFO     | 
[2026-03-08 14:28:11] 2026-03-08 13:27:24,067 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot128/slots/0
[2026-03-08 14:28:11] 2026-03-08 13:27:24,082 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,082 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,082 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | job 7043339473 has completed (purged errors)
[2026-03-08 14:28:11] 2026-03-08 13:27:24,083 | INFO     | overall cleanup function is called
[2026-03-08 14:28:11] 2026-03-08 13:27:25,090 | INFO     | --- collectZombieJob: --- 10, [567927]
[2026-03-08 14:28:11] 2026-03-08 13:27:25,090 | INFO     | zombie collector waiting for pid 567927
[2026-03-08 14:28:11] 2026-03-08 13:27:25,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 14:28:11] 2026-03-08 13:27:25,090 | INFO     | collected zombie processes
[2026-03-08 14:28:11] 2026-03-08 13:27:25,090 | INFO     | will attempt to kill all subprocesses of pid=567927
[2026-03-08 14:28:11] 2026-03-08 13:27:25,604 | INFO     | process IDs to be killed: [567927] (in reverse order)
[2026-03-08 14:28:11] 2026-03-08 13:27:25,835 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 14:28:11] 2026-03-08 13:27:25,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 14:28:11] 2026-03-08 13:27:25,866 | INFO     | did not find any defunct processes belonging to 567927
[2026-03-08 14:28:11] 2026-03-08 13:27:25,895 | INFO     | did not find any defunct processes belonging to 567927
[2026-03-08 14:28:11] 2026-03-08 13:27:25,896 | INFO     | ready for new job
[2026-03-08 14:28:11] 2026-03-08 13:27:25,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 14:28:11] 2026-03-08 13:27:25,897 | INFO     | **************************************
[2026-03-08 14:28:11] 2026-03-08 13:27:25,897 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 14:28:11] 2026-03-08 13:27:25,897 | INFO     | **************************************
[2026-03-08 14:28:11] 2026-03-08 13:27:25,897 | INFO     | 
[2026-03-08 14:28:11] 2026-03-08 13:27:25,902 | INFO     | architecture information:
[2026-03-08 14:28:11] 2026-03-08 13:27:25,903 | INFO     | executing command: cat /etc/os-release
[2026-03-08 14:28:11] 2026-03-08 13:27:25,916 | INFO     | cat /etc/os-release:
[2026-03-08 14:28:11] NAME="CentOS Linux"
[2026-03-08 14:28:11] VERSION="7 (Core)"
[2026-03-08 14:28:11] ID="centos"
[2026-03-08 14:28:11] ID_LIKE="rhel fedora"
[2026-03-08 14:28:11] VERSION_ID="7"
[2026-03-08 14:28:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 14:28:11] ANSI_COLOR="0;31"
[2026-03-08 14:28:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 14:28:11] HOME_URL="https://www.centos.org/"
[2026-03-08 14:28:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 14:28:11] 
[2026-03-08 14:28:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 14:28:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 14:28:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 14:28:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 14:28:11] 
[2026-03-08 14:28:11] 2026-03-08 13:27:25,916 | INFO     | **************************************
[2026-03-08 14:28:11] 2026-03-08 13:27:26,419 | INFO     | executing command: df -mP /var/lib/boinc/var/slot128/slots/0
[2026-03-08 14:28:11] 2026-03-08 13:27:26,436 | INFO     | sufficient remaining disk space (20358103040 B)
[2026-03-08 14:28:11] 2026-03-08 13:27:26,436 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 14:28:11] 2026-03-08 13:27:26,436 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 14:28:11] 2026-03-08 13:27:26,436 | INFO     | update_server=False
[2026-03-08 14:28:11] 2026-03-08 13:27:26,437 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 14:28:11] 2026-03-08 13:27:26,438 | INFO     | all data control threads have been joined
[2026-03-08 14:28:11] 2026-03-08 13:27:26,794 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 14:28:11] 2026-03-08 13:27:26,840 | INFO     | all job control threads have been joined
[2026-03-08 14:28:11] 2026-03-08 13:27:27,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:28:11] 2026-03-08 13:27:27,041 | INFO     | aborting loop
[2026-03-08 14:28:11] 2026-03-08 13:27:27,441 | INFO     | [job] retrieve thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:27,443 | INFO     | [data] control thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:27,567 | INFO     | [data] copytool_in thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:27,618 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:27,647 | INFO     | all payload control threads have been joined
[2026-03-08 14:28:11] 2026-03-08 13:27:27,845 | INFO     | [job] control thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:28,046 | INFO     | [job] job monitor thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:28,221 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:28,338 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 14:28:11] 2026-03-08 13:27:28,545 | INFO     | [job] validate thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:28,652 | INFO     | [payload] control thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:28,799 | INFO     | [data] copytool_out thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:28,825 | INFO     | [payload] validate_post thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:28,834 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:29,017 | INFO     | [payload] failed_post thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:29,075 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 14:28:11] 2026-03-08 13:27:30,080 | INFO     | [job] queue monitor thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:32,343 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:37,312 | INFO     | job.realtimelogging is not enabled
[2026-03-08 14:28:11] 2026-03-08 13:27:38,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 14:28:11] 2026-03-08 13:27:56,604 | INFO     | PID=555863 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-08 14:28:11] 2026-03-08 13:27:56,604 | INFO     | .. there are 48 such processes running
[2026-03-08 14:28:11] 2026-03-08 13:27:56,604 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 14:28:11] 2026-03-08 13:27:56,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 14:28:11] 2026-03-08 13:27:56,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 14:28:11] 2026-03-08 13:28:03,772 | INFO     | [monitor] cgroup control has ended
[2026-03-08 14:28:11] 2026-03-08 13:28:05,633 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23243353544512)>', '<ExcThread(monitor, started 23243110221568)>']
[2026-03-08 14:28:11] 2026-03-08 13:28:05,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 14:28:11] 2026-03-08 13:28:05,649 | INFO     | [monitor] control thread has ended
[2026-03-08 14:28:11] 2026-03-08 13:28:10,658 | INFO     | all workflow threads have been joined
[2026-03-08 14:28:11] 2026-03-08 13:28:10,658 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 14:28:11] 2026-03-08 13:28:10,658 | INFO     | traces error code: 0
[2026-03-08 14:28:11] 2026-03-08 13:28:10,658 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 14:28:11] 2026-03-08 13:28:10,777 [wrapper] ==== pilot stdout END ====
[2026-03-08 14:28:11] 2026-03-08 13:28:10,785 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 14:28:11] 2026-03-08 13:28:10,803 [wrapper] pilotpid: 555863
[2026-03-08 14:28:11] 2026-03-08 13:28:10,812 [wrapper] Pilot exit status: 0
[2026-03-08 14:28:11] 2026-03-08 13:28:10,842 [wrapper] pandaids: 7043339473
[2026-03-08 14:28:11] 2026-03-08 13:28:10,992 [wrapper] cleanup supervisor_pilot 1387960 555864
[2026-03-08 14:28:11] 2026-03-08 13:28:10,994 [wrapper] Test setup, not cleaning
[2026-03-08 14:28:11] 2026-03-08 13:28:10,995 [wrapper] apfmon messages muted
[2026-03-08 14:28:11] 2026-03-08 13:28:10,997 [wrapper] ==== wrapper stdout END ====
[2026-03-08 14:28:11] 2026-03-08 13:28:10,999 [wrapper] ==== wrapper stderr END ====
[2026-03-08 14:28:11]  *** Error codes and diagnostics ***
[2026-03-08 14:28:11]     "exeErrorCode": 0,
[2026-03-08 14:28:11]     "exeErrorDiag": "",
[2026-03-08 14:28:11]     "pilotErrorCode": 0,
[2026-03-08 14:28:11]     "pilotErrorDiag": "",
[2026-03-08 14:28:11]  *** Listing of results directory ***
[2026-03-08 14:28:11] total 409164
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc      5111 Mar  6 17:13 queuedata.json
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc    584627 Mar  6 17:14 pilot3.tar.gz
[2026-03-08 14:28:11] -rwx------. 1 boinc boinc     36322 Mar  6 17:14 runpilot2-wrapper.sh
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc       100 Mar  8 12:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 14:28:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 12:50 run_atlas
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc       105 Mar  8 12:50 job.xml
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc      6706 Mar  8 12:50 init_data.xml
[2026-03-08 14:28:11] -rw-r--r--. 2 boinc boinc 212060931 Mar  8 12:50 EVNT.48966985._000467.pool.root.1
[2026-03-08 14:28:11] -rw-r--r--. 2 boinc boinc     15845 Mar  8 12:50 start_atlas.sh
[2026-03-08 14:28:11] drwxrwx--x. 2 boinc boinc      4096 Mar  8 12:50 shared
[2026-03-08 14:28:11] -rw-r--r--. 2 boinc boinc    597965 Mar  8 12:50 input.tar.gz
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc         0 Mar  8 12:50 boinc_lockfile
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc      2592 Mar  8 12:50 pandaJob.out
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc    999177 Mar  8 12:50 agis_schedconf.cvmfs.json
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc   1521291 Mar  8 12:50 agis_ddmendpoints.agis.ALL.json
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc       444 Mar  8 12:50 workernode_map.json
[2026-03-08 14:28:11] drwx------. 5 boinc boinc      4096 Mar  8 12:50 pilot3
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc 200728832 Mar  8 14:26 HITS.48966988._011632.pool.root.1
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc        95 Mar  8 14:26 pilot_heartbeat.json
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc       529 Mar  8 14:27 boinc_task_state.xml
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc      1032 Mar  8 14:27 memory_monitor_summary.json
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc    289558 Mar  8 14:27 log.48966988._011632.job.log.tgz.1
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc      6355 Mar  8 14:27 heartbeat.json
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc        27 Mar  8 14:27 wrapper_checkpoint.txt
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc      8192 Mar  8 14:27 boinc_mmap_file
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc      4901 Mar  8 14:28 pilotlog.txt
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc    838033 Mar  8 14:28 log.48966988._011632.job.log.1
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc       357 Mar  8 14:28 output.list
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc       620 Mar  8 14:28 runtime_log
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc   1146880 Mar  8 14:28 result.tar.gz
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc      9221 Mar  8 14:28 runtime_log.err
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc       662 Mar  8 14:28 alJODmmzmI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmoaQLDmIC37om.diag
[2026-03-08 14:28:11] -rw-r--r--. 1 boinc boinc     21569 Mar  8 14:28 stderr.txt
[2026-03-08 14:28:11] HITS file was successfully produced:
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc 200728832 Mar  8 14:26 shared/HITS.pool.root.1
[2026-03-08 14:28:11]  *** Contents of shared directory: ***
[2026-03-08 14:28:11] total 404848
[2026-03-08 14:28:11] -rw-r--r--. 2 boinc boinc 212060931 Mar  8 12:50 ATLAS.root_0
[2026-03-08 14:28:11] -rw-r--r--. 2 boinc boinc     15845 Mar  8 12:50 start_atlas.sh
[2026-03-08 14:28:11] -rw-r--r--. 2 boinc boinc    597965 Mar  8 12:50 input.tar.gz
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc 200728832 Mar  8 14:26 HITS.pool.root.1
[2026-03-08 14:28:11] -rw-------. 1 boinc boinc   1146880 Mar  8 14:28 result.tar.gz
14:28:12 (548992): run_atlas exited; CPU time 22543.554999
14:28:12 (548992): called boinc_finish(0)

</stderr_txt>
]]>

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