Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:55:24 (1593048): wrapper (7.7.26015): starting
16:55:24 (1593048): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 16:55:24] Arguments: --nthreads 4
[2026-03-07 16:55:24] Threads: 4
[2026-03-07 16:55:24] Checking for CVMFS
[2026-03-07 16:55:24] No cvmfs_config command found, will try listing directly
[2026-03-07 16:55:24] CVMFS is ok
[2026-03-07 16:55:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 16:55:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 16:55:24] Further information can be found at the LHC@home message board.
[2026-03-07 16:55:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 16:55:24] Checking for apptainer binary...
[2026-03-07 16:55:24] which: no apptainer in ((null))
[2026-03-07 16:55:24] apptainer is not installed, using version from CVMFS
[2026-03-07 16:55:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 16:55:24] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot20/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut04.grid.cesnet.cz
[2026-03-07 16:55:24] apptainer works
[2026-03-07 16:55:24] Set ATHENA_PROC_NUMBER=4
[2026-03-07 16:55:24] Set ATHENA_CORE_NUMBER=4
[2026-03-07 16:55:24] Starting ATLAS job with PandaID=7043317234
[2026-03-07 16:55:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot20/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 21:02:11]  *** The last 200 lines of the pilot log: ***
[2026-03-07 21:02:11] 2026-03-07 20:01:36,506 | INFO     | total number of processed events: 400 (read)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,527 | INFO     | using path: /var/lib/boinc/var/slot20/slots/1/PanDA_Pilot-7043317234/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,527 | INFO     | extracted standard info from prmon json
[2026-03-07 21:02:11] 2026-03-07 20:01:36,527 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 21:02:11] 2026-03-07 20:01:36,528 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 21:02:11] 2026-03-07 20:01:36,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 21:02:11] 2026-03-07 20:01:36,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 21:02:11] 2026-03-07 20:01:36,535 | INFO     | fitting pss+swap vs Time
[2026-03-07 21:02:11] 2026-03-07 20:01:36,536 | INFO     | sum of square deviations: 4394582466.495887
[2026-03-07 21:02:11] 2026-03-07 20:01:36,537 | INFO     | sum of deviations: 10624580624.30575
[2026-03-07 21:02:11] 2026-03-07 20:01:36,538 | INFO     | mean x: 1772906315.5041323
[2026-03-07 21:02:11] 2026-03-07 20:01:36,538 | INFO     | mean y: 2312420.694214876
[2026-03-07 21:02:11] 2026-03-07 20:01:36,538 | INFO     | intersect: -4283961925.508712
[2026-03-07 21:02:11] 2026-03-07 20:01:36,538 | INFO     | chi2: 2.1200857583847252
[2026-03-07 21:02:11] 2026-03-07 20:01:36,539 | INFO     | sum of square deviations: 4127777768.9957786
[2026-03-07 21:02:11] 2026-03-07 20:01:36,540 | INFO     | sum of deviations: 25013642332.552757
[2026-03-07 21:02:11] 2026-03-07 20:01:36,540 | INFO     | mean x: 1772906163.0042193
[2026-03-07 21:02:11] 2026-03-07 20:01:36,540 | INFO     | mean y: 2320502.447257384
[2026-03-07 21:02:11] 2026-03-07 20:01:36,541 | INFO     | intersect: -10741194079.093523
[2026-03-07 21:02:11] 2026-03-07 20:01:36,547 | INFO     | chi2: 1.351335748602018
[2026-03-07 21:02:11] 2026-03-07 20:01:36,547 | INFO     | current chi2=1.351335748602018 (change=36.2603261090915 %)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,548 | INFO     | sum of square deviations: 3871996533.995679
[2026-03-07 21:02:11] 2026-03-07 20:01:36,549 | INFO     | sum of deviations: 24246059538.258606
[2026-03-07 21:02:11] 2026-03-07 20:01:36,549 | INFO     | mean x: 1772906010.5043104
[2026-03-07 21:02:11] 2026-03-07 20:01:36,550 | INFO     | mean y: 2320044.7413793104
[2026-03-07 21:02:11] 2026-03-07 20:01:36,550 | INFO     | intersect: -11099442136.34843
[2026-03-07 21:02:11] 2026-03-07 20:01:36,550 | INFO     | chi2: 1.3519460808156831
[2026-03-07 21:02:11] 2026-03-07 20:01:36,550 | INFO     | current chi2=1.3519460808156831 (change=-0.04516510528907574 %)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,550 | INFO     | right removable region: 231
[2026-03-07 21:02:11] 2026-03-07 20:01:36,551 | INFO     | sum of square deviations: 4127777158.9957786
[2026-03-07 21:02:11] 2026-03-07 20:01:36,552 | INFO     | sum of deviations: -20534630692.232067
[2026-03-07 21:02:11] 2026-03-07 20:01:36,552 | INFO     | mean x: 1772906468.0042193
[2026-03-07 21:02:11] 2026-03-07 20:01:36,553 | INFO     | mean y: 2330043.2320675105
[2026-03-07 21:02:11] 2026-03-07 20:01:36,553 | INFO     | intersect: 8822084155.441257
[2026-03-07 21:02:11] 2026-03-07 20:01:36,553 | INFO     | chi2: 0.8065703948381635
[2026-03-07 21:02:11] 2026-03-07 20:01:36,553 | INFO     | current chi2=0.8065703948381635 (change=61.955765626543226 %)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,554 | INFO     | sum of square deviations: 3871995313.995679
[2026-03-07 21:02:11] 2026-03-07 20:01:36,560 | INFO     | sum of deviations: -17529657176.056038
[2026-03-07 21:02:11] 2026-03-07 20:01:36,560 | INFO     | mean x: 1772906620.5043104
[2026-03-07 21:02:11] 2026-03-07 20:01:36,561 | INFO     | mean y: 2328248.5560344825
[2026-03-07 21:02:11] 2026-03-07 20:01:36,561 | INFO     | intersect: 8028795933.128062
[2026-03-07 21:02:11] 2026-03-07 20:01:36,561 | INFO     | chi2: 0.8028284029031004
[2026-03-07 21:02:11] 2026-03-07 20:01:36,561 | INFO     | current chi2=0.8028284029031004 (change=0.4639386666075073 %)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,561 | INFO     | left removable region: 20
[2026-03-07 21:02:11] 2026-03-07 20:01:36,562 | INFO     | sum of square deviations: 2912840646.995251
[2026-03-07 21:02:11] 2026-03-07 20:01:36,563 | INFO     | sum of deviations: 2446133316.1090055
[2026-03-07 21:02:11] 2026-03-07 20:01:36,563 | INFO     | mean x: 1772906590.0047393
[2026-03-07 21:02:11] 2026-03-07 20:01:36,563 | INFO     | mean y: 2332836.890995261
[2026-03-07 21:02:11] 2026-03-07 20:01:36,563 | INFO     | intersect: -1486511353.9621518
[2026-03-07 21:02:11] 2026-03-07 20:01:36,564 | INFO     | chi2: 0.0029999791802237615
[2026-03-07 21:02:11] 2026-03-07 20:01:36,564 | INFO     | current memory leak: 0.84 B/s (using 211 data points, chi2=0.00)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | could have reported an average CPU frequency of 2516 MHz (12 samples)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | ..............................
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . Timing measurements:
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . get job = 0 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . initial setup = 6 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . payload setup = 6 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . stage-in = 0 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . payload execution = 14729 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . stage-out = 1 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,565 | INFO     | . log creation = 0 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,566 | INFO     | ..............................
[2026-03-07 21:02:11] 2026-03-07 20:01:36,684 | INFO     | 
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | job summary report
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | --------------------------------------------------
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | PanDA job id: 7043317234
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | task id: 48966988
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | errors: (none)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | pilot state: finished 
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | transexitcode: 0
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | exeerrorcode: 0
[2026-03-07 21:02:11] 2026-03-07 20:01:36,685 | INFO     | exeerrordiag: 
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | exitcode: 0
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | exitmsg: OK
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | cpuconsumptiontime: 53450 s
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | nevents: 400
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | neventsw: 0
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | pid: 1601933
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | pgrp: 1601933
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | corecount: 4
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | event service: False
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | sizes: {0: 2295424, 1: 2295885, 12: 2295885, 14739: 2327197, 14740: 2327196, 14741: 2336456, 14744: 2336594}
[2026-03-07 21:02:11] 2026-03-07 20:01:36,686 | INFO     | --------------------------------------------------
[2026-03-07 21:02:11] 2026-03-07 20:01:36,687 | INFO     | 
[2026-03-07 21:02:11] 2026-03-07 20:01:36,687 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot20/slots/1
[2026-03-07 21:02:11] 2026-03-07 20:01:36,738 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,738 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,738 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | job 7043317234 has completed (purged errors)
[2026-03-07 21:02:11] 2026-03-07 20:01:36,740 | INFO     | overall cleanup function is called
[2026-03-07 21:02:11] 2026-03-07 20:01:37,748 | INFO     | --- collectZombieJob: --- 10, [1601933]
[2026-03-07 21:02:11] 2026-03-07 20:01:37,748 | INFO     | zombie collector waiting for pid 1601933
[2026-03-07 21:02:11] 2026-03-07 20:01:37,748 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 21:02:11] 2026-03-07 20:01:37,748 | INFO     | collected zombie processes
[2026-03-07 21:02:11] 2026-03-07 20:01:37,748 | INFO     | will attempt to kill all subprocesses of pid=1601933
[2026-03-07 21:02:11] 2026-03-07 20:01:38,252 | INFO     | process IDs to be killed: [1601933] (in reverse order)
[2026-03-07 21:02:11] 2026-03-07 20:01:38,391 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 21:02:11] 2026-03-07 20:01:38,395 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 21:02:11] 2026-03-07 20:01:38,408 | INFO     | did not find any defunct processes belonging to 1601933
[2026-03-07 21:02:11] 2026-03-07 20:01:38,424 | INFO     | did not find any defunct processes belonging to 1601933
[2026-03-07 21:02:11] 2026-03-07 20:01:38,424 | INFO     | ready for new job
[2026-03-07 21:02:11] 2026-03-07 20:01:38,424 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 21:02:11] 2026-03-07 20:01:38,427 | INFO     | **************************************
[2026-03-07 21:02:11] 2026-03-07 20:01:38,427 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 21:02:11] 2026-03-07 20:01:38,427 | INFO     | **************************************
[2026-03-07 21:02:11] 2026-03-07 20:01:38,427 | INFO     | 
[2026-03-07 21:02:11] 2026-03-07 20:01:38,431 | INFO     | architecture information:
[2026-03-07 21:02:11] 2026-03-07 20:01:38,435 | INFO     | executing command: cat /etc/os-release
[2026-03-07 21:02:11] 2026-03-07 20:01:38,459 | INFO     | cat /etc/os-release:
[2026-03-07 21:02:11] NAME="CentOS Linux"
[2026-03-07 21:02:11] VERSION="7 (Core)"
[2026-03-07 21:02:11] ID="centos"
[2026-03-07 21:02:11] ID_LIKE="rhel fedora"
[2026-03-07 21:02:11] VERSION_ID="7"
[2026-03-07 21:02:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 21:02:11] ANSI_COLOR="0;31"
[2026-03-07 21:02:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 21:02:11] HOME_URL="https://www.centos.org/"
[2026-03-07 21:02:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 21:02:11] 
[2026-03-07 21:02:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 21:02:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 21:02:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 21:02:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 21:02:11] 
[2026-03-07 21:02:11] 2026-03-07 20:01:38,459 | INFO     | **************************************
[2026-03-07 21:02:11] 2026-03-07 20:01:38,963 | INFO     | executing command: df -mP /var/lib/boinc/var/slot20/slots/1
[2026-03-07 21:02:11] 2026-03-07 20:01:39,050 | INFO     | sufficient remaining disk space (20309868544 B)
[2026-03-07 21:02:11] 2026-03-07 20:01:39,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 21:02:11] 2026-03-07 20:01:39,051 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 21:02:11] 2026-03-07 20:01:39,051 | INFO     | update_server=False
[2026-03-07 21:02:11] 2026-03-07 20:01:39,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 21:02:11] 2026-03-07 20:01:39,286 | INFO     | all job control threads have been joined
[2026-03-07 21:02:11] 2026-03-07 20:01:39,403 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-03-07 21:02:11] 2026-03-07 20:01:39,403 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-03-07 21:02:11] 2026-03-07 20:01:39,403 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:02:11] 2026-03-07 20:01:39,403 | INFO     | will abort loop
[2026-03-07 21:02:11] 2026-03-07 20:01:39,838 | INFO     | all payload control threads have been joined
[2026-03-07 21:02:11] 2026-03-07 20:01:39,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 21:02:11] 2026-03-07 20:01:40,026 | INFO     | all data control threads have been joined
[2026-03-07 21:02:11] 2026-03-07 20:01:40,057 | INFO     | [job] retrieve thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:40,208 | INFO     | [payload] validate_post thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:40,291 | INFO     | [job] control thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:40,352 | INFO     | [payload] failed_post thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:40,408 | INFO     | [job] job monitor thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:40,421 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:40,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 21:02:11] 2026-03-07 20:01:40,658 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:40,843 | INFO     | [payload] control thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:41,031 | INFO     | [data] control thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:41,208 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:41,208 | INFO     | [data] copytool_in thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:41,456 | INFO     | [job] validate thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:41,694 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 21:02:11] 2026-03-07 20:01:41,942 | INFO     | [data] copytool_out thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:42,699 | INFO     | [job] queue monitor thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:44,589 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:01:49,647 | INFO     | job.realtimelogging is not enabled
[2026-03-07 21:02:11] 2026-03-07 20:01:50,652 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 21:02:11] 2026-03-07 20:02:05,618 | INFO     | [monitor] cgroup control has ended
[2026-03-07 21:02:11] 2026-03-07 20:02:06,234 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22618171258688)>', '<ExcThread(monitor, started 22617930344192)>']
[2026-03-07 21:02:11] 2026-03-07 20:02:08,624 | INFO     | PID=1597041 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 21:02:11] 2026-03-07 20:02:08,624 | INFO     | .. there are 14 such processes running
[2026-03-07 21:02:11] 2026-03-07 20:02:08,625 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 21:02:11] 2026-03-07 20:02:08,625 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 21:02:11] 2026-03-07 20:02:08,625 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 21:02:11] 2026-03-07 20:02:08,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 21:02:11] 2026-03-07 20:02:08,625 | INFO     | [monitor] control thread has ended
[2026-03-07 21:02:11] 2026-03-07 20:02:11,259 | INFO     | all workflow threads have been joined
[2026-03-07 21:02:11] 2026-03-07 20:02:11,259 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 21:02:11] 2026-03-07 20:02:11,259 | INFO     | traces error code: 0
[2026-03-07 21:02:11] 2026-03-07 20:02:11,259 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 21:02:11] 2026-03-07 20:02:11,432 [wrapper] ==== pilot stdout END ====
[2026-03-07 21:02:11] 2026-03-07 20:02:11,441 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 21:02:11] 2026-03-07 20:02:11,445 [wrapper] pilotpid: 1597041
[2026-03-07 21:02:11] 2026-03-07 20:02:11,448 [wrapper] Pilot exit status: 0
[2026-03-07 21:02:11] 2026-03-07 20:02:11,486 [wrapper] pandaids: 7043317234
[2026-03-07 21:02:11] 2026-03-07 20:02:11,584 [wrapper] cleanup supervisor_pilot 1882454 1597042
[2026-03-07 21:02:11] 2026-03-07 20:02:11,587 [wrapper] Test setup, not cleaning
[2026-03-07 21:02:11] 2026-03-07 20:02:11,590 [wrapper] apfmon messages muted
[2026-03-07 21:02:11] 2026-03-07 20:02:11,592 [wrapper] ==== wrapper stdout END ====
[2026-03-07 21:02:11] 2026-03-07 20:02:11,596 [wrapper] ==== wrapper stderr END ====
[2026-03-07 21:02:11]  *** Error codes and diagnostics ***
[2026-03-07 21:02:11]     "exeErrorCode": 0,
[2026-03-07 21:02:11]     "exeErrorDiag": "",
[2026-03-07 21:02:11]     "pilotErrorCode": 0,
[2026-03-07 21:02:11]     "pilotErrorDiag": "",
[2026-03-07 21:02:11]  *** Listing of results directory ***
[2026-03-07 21:02:11] total 403740
[2026-03-07 21:02:11] -rwx------. 1 boinc boinc     36322 Mar  6 16:33 runpilot2-wrapper.sh
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc      5111 Mar  6 16:33 queuedata.json
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc    584627 Mar  6 16:33 pilot3.tar.gz
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc       100 Mar  7 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 21:02:11] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 16:55 run_atlas
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc       105 Mar  7 16:55 job.xml
[2026-03-07 21:02:11] -rw-r--r--. 2 boinc boinc 209396992 Mar  7 16:55 EVNT.48966985._000347.pool.root.1
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc      6562 Mar  7 16:55 init_data.xml
[2026-03-07 21:02:11] -rw-r--r--. 2 boinc boinc     15845 Mar  7 16:55 start_atlas.sh
[2026-03-07 21:02:11] drwxrwx--x. 2 boinc boinc      4096 Mar  7 16:55 shared
[2026-03-07 21:02:11] -rw-r--r--. 2 boinc boinc    597963 Mar  7 16:55 input.tar.gz
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc         0 Mar  7 16:55 boinc_lockfile
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc      2592 Mar  7 16:55 pandaJob.out
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc    999177 Mar  7 16:55 agis_schedconf.cvmfs.json
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc       452 Mar  7 16:55 workernode_map.json
[2026-03-07 21:02:11] drwx------. 5 boinc boinc      4096 Mar  7 16:55 pilot3
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc 195148434 Mar  7 21:00 HITS.48966988._010571.pool.root.1
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc       530 Mar  7 21:01 boinc_task_state.xml
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc      1033 Mar  7 21:01 memory_monitor_summary.json
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc   1521291 Mar  7 21:01 agis_ddmendpoints.agis.ALL.json
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc    406796 Mar  7 21:01 log.48966988._010571.job.log.tgz.1
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc      6402 Mar  7 21:01 heartbeat.json
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc      8192 Mar  7 21:02 boinc_mmap_file
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc        28 Mar  7 21:02 wrapper_checkpoint.txt
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc        95 Mar  7 21:02 pilot_heartbeat.json
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc      5087 Mar  7 21:02 pilotlog.txt
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc   2065235 Mar  7 21:02 log.48966988._010571.job.log.1
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc       357 Mar  7 21:02 output.list
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc       620 Mar  7 21:02 runtime_log
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc   2488320 Mar  7 21:02 result.tar.gz
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc      9205 Mar  7 21:02 runtime_log.err
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc       665 Mar  7 21:02 jFZLDmXMmI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmdSQLDmBGRfhn.diag
[2026-03-07 21:02:11] -rw-r--r--. 1 boinc boinc     20910 Mar  7 21:02 stderr.txt
[2026-03-07 21:02:11] HITS file was successfully produced:
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc 195148434 Mar  7 21:00 shared/HITS.pool.root.1
[2026-03-07 21:02:11]  *** Contents of shared directory: ***
[2026-03-07 21:02:11] total 398108
[2026-03-07 21:02:11] -rw-r--r--. 2 boinc boinc 209396992 Mar  7 16:55 ATLAS.root_0
[2026-03-07 21:02:11] -rw-r--r--. 2 boinc boinc     15845 Mar  7 16:55 start_atlas.sh
[2026-03-07 21:02:11] -rw-r--r--. 2 boinc boinc    597963 Mar  7 16:55 input.tar.gz
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc 195148434 Mar  7 21:00 HITS.pool.root.1
[2026-03-07 21:02:11] -rw-------. 1 boinc boinc   2488320 Mar  7 21:02 result.tar.gz
21:02:13 (1593048): run_atlas exited; CPU time 54107.448185
21:02:13 (1593048): called boinc_finish(0)

</stderr_txt>
]]>

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