Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:53:41 (1672814): wrapper (7.7.26015): starting
14:53:41 (1672814): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 14:53:41] Arguments: --nthreads 4
[2026-03-08 14:53:41] Threads: 4
[2026-03-08 14:53:41] Checking for CVMFS
[2026-03-08 14:53:41] No cvmfs_config command found, will try listing directly
[2026-03-08 14:53:41] CVMFS is ok
[2026-03-08 14:53:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 14:53:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 14:53:41] Further information can be found at the LHC@home message board.
[2026-03-08 14:53:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 14:53:41] Checking for apptainer binary...
[2026-03-08 14:53:41] which: no apptainer in ((null))
[2026-03-08 14:53:41] apptainer is not installed, using version from CVMFS
[2026-03-08 14:53:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 14:53:41] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot196/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-03-08 14:53:41] apptainer works
[2026-03-08 14:53:41] Set ATHENA_PROC_NUMBER=4
[2026-03-08 14:53:41] Set ATHENA_CORE_NUMBER=4
[2026-03-08 14:53:41] Starting ATLAS job with PandaID=7043317248
[2026-03-08 14:53:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot196/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 16:33:25]  *** The last 200 lines of the pilot log: ***
[2026-03-08 16:33:25]  is_tar=False
[2026-03-08 16:33:25]  lfn=log.48966988._010585.job.log.tgz.1
[2026-03-08 16:33:25]  mtime=0
[2026-03-08 16:33:25]  protocol_id=None
[2026-03-08 16:33:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 16:33:25]  replicas=None
[2026-03-08 16:33:25]  scope=mc23_13p6TeV
[2026-03-08 16:33:25]  status=None
[2026-03-08 16:33:25]  status_code=0
[2026-03-08 16:33:25]  storage_token=
[2026-03-08 16:33:25]  surl=/var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7043317248/log.48966988._010585.job.log.tgz.1
[2026-03-08 16:33:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/bd/log.48966988._010585.job.log.tgz.1
[2026-03-08 16:33:25]  workdir=None
[2026-03-08 16:33:25] ]
[2026-03-08 16:33:25] 2026-03-08 15:32:48,752 | INFO     | transferring file log.48966988._010585.job.log.tgz.1 from /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7043317248/log.48966988._010585.job.log.tgz.1 to /var/lib/
[2026-03-08 16:33:25] 2026-03-08 15:32:48,752 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7043317248/log.48966988._010585.job.log.tgz.1 /var/lib/boinc/var/slot196/slots/0/
[2026-03-08 16:33:25] 2026-03-08 15:32:48,767 | INFO     | adding to output.list: log.48966988._010585.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/bd/log.48966988._010585.job.log.tg
[2026-03-08 16:33:25] 2026-03-08 15:32:48,768 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 16:33:25] 2026-03-08 15:32:48,768 | INFO     | summary of transferred files:
[2026-03-08 16:33:25] 2026-03-08 15:32:48,768 | INFO     |  -- lfn=log.48966988._010585.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 16:33:25] 2026-03-08 15:32:48,768 | INFO     | stage-out finished correctly
[2026-03-08 16:33:25] 2026-03-08 15:32:49,098 | INFO     | time since job start (5935s) is within the limit (349056.0s)
[2026-03-08 16:33:25] 2026-03-08 15:32:50,677 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 16:33:25] 2026-03-08 15:32:51,104 | INFO     | time since job start (5937s) is within the limit (349056.0s)
[2026-03-08 16:33:25] 2026-03-08 15:32:51,756 | WARNING  | process 1691014 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 16:33:25] 2026-03-08 15:32:51,756 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7043317248/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,232 | INFO     | number of running child processes to parent process 1691014: 1
[2026-03-08 16:33:25] 2026-03-08 15:32:52,233 | INFO     | maximum number of monitored processes: 6
[2026-03-08 16:33:25] 2026-03-08 15:32:52,420 | INFO     | job 7043317248 has state=finished
[2026-03-08 16:33:25] 2026-03-08 15:32:52,420 | INFO     | preparing for final server update for job 7043317248 in state='finished'
[2026-03-08 16:33:25] 2026-03-08 15:32:52,956 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,956 | INFO     | reading metadata from: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7043317248/jobReport.json
[2026-03-08 16:33:25] 2026-03-08 15:32:52,958 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot196/slots/0/workernode_map.json
[2026-03-08 16:33:25] 2026-03-08 15:32:52,958 | INFO     | this job has now completed (state=finished)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,958 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,958 | INFO     | log transfer has been attempted: DONE
[2026-03-08 16:33:25] 2026-03-08 15:32:52,958 | INFO     | job 7043317248 has finished - writing final server update
[2026-03-08 16:33:25] 2026-03-08 15:32:52,958 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_18562/.job.ad'
[2026-03-08 16:33:25] 2026-03-08 15:32:52,958 | INFO     | total number of processed events: 400 (read)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,976 | INFO     | using path: /var/lib/boinc/var/slot196/slots/0/PanDA_Pilot-7043317248/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,976 | INFO     | extracted standard info from prmon json
[2026-03-08 16:33:25] 2026-03-08 15:32:52,976 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 16:33:25] 2026-03-08 15:32:52,976 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 16:33:25] 2026-03-08 15:32:52,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 16:33:25] 2026-03-08 15:32:52,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 16:33:25] 2026-03-08 15:32:52,977 | INFO     | fitting pss+swap vs Time
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | sum of square deviations: 226022842.5
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | sum of deviations: 434642568.0
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | mean x: 1772981073.5
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | mean y: 2329446.933333333
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | intersect: -3407118192.4194756
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | chi2: 0.000369735240480526
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | current memory leak: 1.92 B/s (using 90 data points, chi2=0.00)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | could have reported an average CPU frequency of 3591 MHz (7 samples)
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | ..............................
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | . Timing measurements:
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | . get job = 0 s
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | . initial setup = 4 s
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | . payload setup = 4 s
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | . stage-in = 0 s
[2026-03-08 16:33:25] 2026-03-08 15:32:52,978 | INFO     | . payload execution = 5914 s
[2026-03-08 16:33:25] 2026-03-08 15:32:52,979 | INFO     | . stage-out = 0 s
[2026-03-08 16:33:25] 2026-03-08 15:32:52,979 | INFO     | . log creation = 0 s
[2026-03-08 16:33:25] 2026-03-08 15:32:52,979 | INFO     | ..............................
[2026-03-08 16:33:25] 2026-03-08 15:32:53,026 | INFO     | 
[2026-03-08 16:33:25] 2026-03-08 15:32:53,026 | INFO     | job summary report
[2026-03-08 16:33:25] 2026-03-08 15:32:53,026 | INFO     | --------------------------------------------------
[2026-03-08 16:33:25] 2026-03-08 15:32:53,026 | INFO     | PanDA job id: 7043317248
[2026-03-08 16:33:25] 2026-03-08 15:32:53,026 | INFO     | task id: 48966988
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | errors: (none)
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | pilot state: finished 
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | transexitcode: 0
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | exeerrorcode: 0
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | exeerrordiag: 
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | exitcode: 0
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | exitmsg: OK
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | cpuconsumptiontime: 22783 s
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | nevents: 400
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | neventsw: 0
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | pid: 1691014
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | pgrp: 1691014
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | corecount: 4
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | event service: False
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | sizes: {0: 2295858, 11: 2295858, 5922: 2322620, 5924: 2331642, 5925: 2331698, 5928: 2331892}
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | --------------------------------------------------
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | 
[2026-03-08 16:33:25] 2026-03-08 15:32:53,027 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot196/slots/0
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | job 7043317248 has completed (purged errors)
[2026-03-08 16:33:25] 2026-03-08 15:32:53,045 | INFO     | overall cleanup function is called
[2026-03-08 16:33:25] 2026-03-08 15:32:54,052 | INFO     | --- collectZombieJob: --- 10, [1691014]
[2026-03-08 16:33:25] 2026-03-08 15:32:54,052 | INFO     | zombie collector waiting for pid 1691014
[2026-03-08 16:33:25] 2026-03-08 15:32:54,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 16:33:25] 2026-03-08 15:32:54,052 | INFO     | collected zombie processes
[2026-03-08 16:33:25] 2026-03-08 15:32:54,052 | INFO     | will attempt to kill all subprocesses of pid=1691014
[2026-03-08 16:33:25] 2026-03-08 15:32:54,522 | INFO     | process IDs to be killed: [1691014] (in reverse order)
[2026-03-08 16:33:25] 2026-03-08 15:32:54,738 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 16:33:25] 2026-03-08 15:32:54,739 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 16:33:25] 2026-03-08 15:32:54,771 | INFO     | did not find any defunct processes belonging to 1691014
[2026-03-08 16:33:25] 2026-03-08 15:32:54,802 | INFO     | did not find any defunct processes belonging to 1691014
[2026-03-08 16:33:25] 2026-03-08 15:32:54,802 | INFO     | ready for new job
[2026-03-08 16:33:25] 2026-03-08 15:32:54,802 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 16:33:25] 2026-03-08 15:32:54,804 | INFO     | **************************************
[2026-03-08 16:33:25] 2026-03-08 15:32:54,804 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 16:33:25] 2026-03-08 15:32:54,804 | INFO     | **************************************
[2026-03-08 16:33:25] 2026-03-08 15:32:54,804 | INFO     | 
[2026-03-08 16:33:25] 2026-03-08 15:32:54,810 | INFO     | architecture information:
[2026-03-08 16:33:25] 2026-03-08 15:32:54,810 | INFO     | executing command: cat /etc/os-release
[2026-03-08 16:33:25] 2026-03-08 15:32:54,826 | INFO     | cat /etc/os-release:
[2026-03-08 16:33:25] NAME="CentOS Linux"
[2026-03-08 16:33:25] VERSION="7 (Core)"
[2026-03-08 16:33:25] ID="centos"
[2026-03-08 16:33:25] ID_LIKE="rhel fedora"
[2026-03-08 16:33:25] VERSION_ID="7"
[2026-03-08 16:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 16:33:25] ANSI_COLOR="0;31"
[2026-03-08 16:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 16:33:25] HOME_URL="https://www.centos.org/"
[2026-03-08 16:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 16:33:25] 
[2026-03-08 16:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 16:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 16:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 16:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 16:33:25] 
[2026-03-08 16:33:25] 2026-03-08 15:32:54,827 | INFO     | **************************************
[2026-03-08 16:33:25] 2026-03-08 15:32:55,329 | INFO     | executing command: df -mP /var/lib/boinc/var/slot196/slots/0
[2026-03-08 16:33:25] 2026-03-08 15:32:55,344 | INFO     | sufficient remaining disk space (20823670784 B)
[2026-03-08 16:33:25] 2026-03-08 15:32:55,345 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 16:33:25] 2026-03-08 15:32:55,345 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 16:33:25] 2026-03-08 15:32:55,345 | INFO     | update_server=False
[2026-03-08 16:33:25] 2026-03-08 15:32:55,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 16:33:25] 2026-03-08 15:32:55,658 | INFO     | all data control threads have been joined
[2026-03-08 16:33:25] 2026-03-08 15:32:55,680 | INFO     | all payload control threads have been joined
[2026-03-08 16:33:25] 2026-03-08 15:32:55,743 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:33:25] 2026-03-08 15:32:55,743 | INFO     | aborting loop
[2026-03-08 16:33:25] 2026-03-08 15:32:56,350 | INFO     | [job] retrieve thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:56,612 | INFO     | [data] copytool_in thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:56,663 | INFO     | [data] control thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:56,685 | INFO     | [payload] control thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:56,736 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 16:33:25] 2026-03-08 15:32:56,746 | INFO     | [job] job monitor thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:56,766 | INFO     | all job control threads have been joined
[2026-03-08 16:33:25] 2026-03-08 15:32:56,777 | INFO     | [payload] failed_post thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:56,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 16:33:25] 2026-03-08 15:32:57,301 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:57,485 | INFO     | [job] validate thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:57,565 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:57,599 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:57,771 | INFO     | [job] control thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:57,945 | INFO     | [payload] validate_post thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:58,035 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 16:33:25] 2026-03-08 15:32:58,833 | INFO     | [data] copytool_out thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:32:59,040 | INFO     | [job] queue monitor thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:33:00,741 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:33:03,286 | INFO     | [monitor] cgroup control has ended
[2026-03-08 16:33:25] 2026-03-08 15:33:05,912 | INFO     | job.realtimelogging is not enabled
[2026-03-08 16:33:25] 2026-03-08 15:33:06,917 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 16:33:25] 2026-03-08 15:33:08,015 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22421457000256)>', '<ExcThread(monitor, started 22421217486592)>']
[2026-03-08 16:33:25] 2026-03-08 15:33:13,040 | INFO     | all workflow threads have been joined
[2026-03-08 16:33:25] 2026-03-08 15:33:13,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 16:33:25] 2026-03-08 15:33:13,040 | INFO     | traces error code: 0
[2026-03-08 16:33:25] 2026-03-08 15:33:13,040 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 16:33:25] 2026-03-08 15:33:24,726 | INFO     | PID=1677417 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 16:33:25] 2026-03-08 15:33:24,726 | INFO     | .. there are 47 such processes running
[2026-03-08 16:33:25] 2026-03-08 15:33:24,726 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 16:33:25] 2026-03-08 15:33:24,727 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 16:33:25] 2026-03-08 15:33:24,727 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 16:33:25] 2026-03-08 15:33:24,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 16:33:25] 2026-03-08 15:33:24,727 | INFO     | [monitor] control thread has ended
[2026-03-08 16:33:25] 2026-03-08 15:33:24,864 [wrapper] ==== pilot stdout END ====
[2026-03-08 16:33:25] 2026-03-08 15:33:24,867 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 16:33:25] 2026-03-08 15:33:24,869 [wrapper] pilotpid: 1677417
[2026-03-08 16:33:25] 2026-03-08 15:33:24,871 [wrapper] Pilot exit status: 0
[2026-03-08 16:33:25] 2026-03-08 15:33:24,877 [wrapper] pandaids: 7043317248
[2026-03-08 16:33:25] 2026-03-08 15:33:25,004 [wrapper] cleanup supervisor_pilot 2365009 1677418
[2026-03-08 16:33:25] 2026-03-08 15:33:25,007 [wrapper] Test setup, not cleaning
[2026-03-08 16:33:25] 2026-03-08 15:33:25,009 [wrapper] apfmon messages muted
[2026-03-08 16:33:25] 2026-03-08 15:33:25,011 [wrapper] ==== wrapper stdout END ====
[2026-03-08 16:33:25] 2026-03-08 15:33:25,013 [wrapper] ==== wrapper stderr END ====
[2026-03-08 16:33:25]  *** Error codes and diagnostics ***
[2026-03-08 16:33:25]     "exeErrorCode": 0,
[2026-03-08 16:33:25]     "exeErrorDiag": "",
[2026-03-08 16:33:25]     "pilotErrorCode": 0,
[2026-03-08 16:33:25]     "pilotErrorDiag": "",
[2026-03-08 16:33:25]  *** Listing of results directory ***
[2026-03-08 16:33:25] total 398292
[2026-03-08 16:33:25] -rwx------. 1 boinc boinc     36322 Mar  6 16:51 runpilot2-wrapper.sh
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc      5111 Mar  6 16:51 queuedata.json
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc    584627 Mar  6 16:52 pilot3.tar.gz
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc       100 Mar  8 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 16:33:25] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 14:53 run_atlas
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc       105 Mar  8 14:53 job.xml
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc      6707 Mar  8 14:53 init_data.xml
[2026-03-08 16:33:25] -rw-r--r--. 2 boinc boinc 209396992 Mar  8 14:53 EVNT.48966985._000347.pool.root.1
[2026-03-08 16:33:25] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:53 start_atlas.sh
[2026-03-08 16:33:25] drwxrwx--x. 2 boinc boinc      4096 Mar  8 14:53 shared
[2026-03-08 16:33:25] -rw-r--r--. 2 boinc boinc    597971 Mar  8 14:53 input.tar.gz
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc         0 Mar  8 14:53 boinc_lockfile
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc      2592 Mar  8 14:53 pandaJob.out
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc    999212 Mar  8 14:53 agis_schedconf.cvmfs.json
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc   1521291 Mar  8 14:53 agis_ddmendpoints.agis.ALL.json
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc       445 Mar  8 14:53 workernode_map.json
[2026-03-08 16:33:25] drwx------. 5 boinc boinc      4096 Mar  8 14:53 pilot3
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc 192215014 Mar  8 16:32 HITS.48966988._010585.pool.root.1
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc       529 Mar  8 16:32 boinc_task_state.xml
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc      1045 Mar  8 16:32 memory_monitor_summary.json
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc        95 Mar  8 16:32 pilot_heartbeat.json
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc    297947 Mar  8 16:32 log.48966988._010585.job.log.tgz.1
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc      6356 Mar  8 16:32 heartbeat.json
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc        27 Mar  8 16:33 wrapper_checkpoint.txt
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc      8192 Mar  8 16:33 boinc_mmap_file
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc       823 Mar  8 16:33 pilotlog.txt
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc    857022 Mar  8 16:33 log.48966988._010585.job.log.1
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc       357 Mar  8 16:33 output.list
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc       620 Mar  8 16:33 runtime_log
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc   1167360 Mar  8 16:33 result.tar.gz
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc      9221 Mar  8 16:33 runtime_log.err
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc       662 Mar  8 16:33 P9nLDmbdmI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTnSLDmeDsESo.diag
[2026-03-08 16:33:25] -rw-r--r--. 1 boinc boinc     21444 Mar  8 16:33 stderr.txt
[2026-03-08 16:33:25] HITS file was successfully produced:
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc 192215014 Mar  8 16:32 shared/HITS.pool.root.1
[2026-03-08 16:33:25]  *** Contents of shared directory: ***
[2026-03-08 16:33:25] total 393952
[2026-03-08 16:33:25] -rw-r--r--. 2 boinc boinc 209396992 Mar  8 14:53 ATLAS.root_0
[2026-03-08 16:33:25] -rw-r--r--. 2 boinc boinc     15845 Mar  8 14:53 start_atlas.sh
[2026-03-08 16:33:25] -rw-r--r--. 2 boinc boinc    597971 Mar  8 14:53 input.tar.gz
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc 192215014 Mar  8 16:32 HITS.pool.root.1
[2026-03-08 16:33:25] -rw-------. 1 boinc boinc   1167360 Mar  8 16:33 result.tar.gz
16:33:26 (1672814): run_atlas exited; CPU time 23060.942133
16:33:26 (1672814): called boinc_finish(0)

</stderr_txt>
]]>

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