Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:39:38 (1571429): wrapper (7.7.26015): starting
09:39:38 (1571429): wrapper: running run_atlas (--nthreads 2)
[2026-03-07 09:39:38] Arguments: --nthreads 2
[2026-03-07 09:39:38] Threads: 2
[2026-03-07 09:39:38] Checking for CVMFS
[2026-03-07 09:39:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 09:39:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 09:39:59] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 09:39:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 09:39:59] 2.9.2.0 1310661 2198 55848 156994 2 50 29401409 36864000 0 130560 0 641046 99.977 87719 9013 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-03-07 09:39:59] CVMFS is ok
[2026-03-07 09:39:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 09:39:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 09:39:59] Further information can be found at the LHC@home message board.
[2026-03-07 09:39:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 09:39:59] Checking for apptainer binary...
[2026-03-07 09:39:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-07 09:39:59] Running /usr/bin/apptainer --version
[2026-03-07 09:39:59] apptainer version 1.4.1-1.1
[2026-03-07 09:39:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 09:39:59] thA310
[2026-03-07 09:39:59] apptainer works
[2026-03-07 09:40:00] Set ATHENA_PROC_NUMBER=2
[2026-03-07 09:40:00] Set ATHENA_CORE_NUMBER=2
[2026-03-07 09:40:00] Starting ATLAS job with PandaID=7043336826
[2026-03-07 09:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 12:13:44]  *** The last 200 lines of the pilot log: ***
[2026-03-07 12:13:44] 2026-03-07 11:13:14,854 | INFO     | all payload control threads have been joined
[2026-03-07 12:13:44] 2026-03-07 11:13:14,959 | INFO     | all data control threads have been joined
[2026-03-07 12:13:44] 2026-03-07 11:13:15,388 | INFO     | [job] retrieve thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,389 | INFO     | [job] queue monitor thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,431 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,550 | INFO     | [job] job monitor thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,644 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 12:13:44] 2026-03-07 11:13:15,645 | INFO     | [payload] validate_post thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,676 | INFO     | all job control threads have been joined
[2026-03-07 12:13:44] 2026-03-07 11:13:15,861 | INFO     | [payload] control thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,904 | INFO     | [job] validate thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,964 | INFO     | [data] control thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:15,979 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:16,147 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:16,256 | INFO     | [data] copytool_in thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:16,355 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:16,682 | INFO     | [job] control thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:16,727 | INFO     | [payload] failed_post thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:17,651 | INFO     | [data] copytool_out thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:18,388 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 12:13:44] 2026-03-07 11:13:37,874 | INFO     | [monitor] cgroup control has ended
[2026-03-07 12:13:44] 2026-03-07 11:13:39,410 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898089236288)>', '<ExcThread(monitor, started 139897142765312)>']
[2026-03-07 12:13:44] 2026-03-07 11:13:44,436 | INFO     | all workflow threads have been joined
[2026-03-07 12:13:44] 2026-03-07 11:13:44,437 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 12:13:44] 2026-03-07 11:13:44,437 | INFO     | traces error code: 0
[2026-03-07 12:13:44] 2026-03-07 11:13:44,437 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 12:13:44] 2026-03-07 11:13:44,770 | INFO     | PID=1575464 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 12:13:44] 2026-03-07 11:13:44,770 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 12:13:44] 2026-03-07 11:13:44,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 12:13:44] 2026-03-07 11:13:44,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 12:13:44] 2026-03-07 11:13:44,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 12:13:44] 2026-03-07 11:13:44,770 | INFO     | [monitor] control thread has ended
[2026-03-07 12:13:44] 2026-03-07 11:13:44,808 [wrapper] ==== pilot stdout END ====
[2026-03-07 12:13:44] 2026-03-07 11:13:44,811 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 12:13:44] 2026-03-07 11:13:44,813 [wrapper] pilotpid: 1575464
[2026-03-07 12:13:44] 2026-03-07 11:13:44,815 [wrapper] Pilot exit status: 0
[2026-03-07 12:13:44] 2026-03-07 11:13:44,822 [wrapper] pandaids: 7043336826
[2026-03-07 12:13:44] 2026-03-07 11:13:44,834 [wrapper] cleanup supervisor_pilot 1586630 1575465
[2026-03-07 12:13:44] 2026-03-07 11:13:44,836 [wrapper] Test setup, not cleaning
[2026-03-07 12:13:44] 2026-03-07 11:13:44,838 [wrapper] apfmon messages muted
[2026-03-07 12:13:44] 2026-03-07 11:13:44,840 [wrapper] ==== wrapper stdout END ====
[2026-03-07 12:13:44] 2026-03-07 11:13:44,843 [wrapper] ==== wrapper stderr END ====
[2026-03-07 12:13:44]  *** Error codes and diagnostics ***
[2026-03-07 12:13:44]     "exeErrorCode": 0,
[2026-03-07 12:13:44]     "exeErrorDiag": "",
[2026-03-07 12:13:44]     "pilotErrorCode": 0,
[2026-03-07 12:13:44]     "pilotErrorDiag": "",
[2026-03-07 12:13:44]  *** Listing of results directory ***
[2026-03-07 12:13:44] total 411020
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc    584627 Mar  6 16:33 pilot3.tar.gz
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc      5111 Mar  6 16:48 queuedata.json
[2026-03-07 12:13:44] -rwx------ 1 boinc boinc     36322 Mar  6 16:49 runpilot2-wrapper.sh
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc       100 Mar  7 09:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 12:13:44] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 09:39 run_atlas
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc       105 Mar  7 09:39 job.xml
[2026-03-07 12:13:44] -rw-r--r-- 2 boinc boinc 215332053 Mar  7 09:39 EVNT.48966985._000092.pool.root.1
[2026-03-07 12:13:44] drwxrwx--x 2 boinc boinc      4096 Mar  7 09:39 shared
[2026-03-07 12:13:44] -rw-r--r-- 2 boinc boinc    597974 Mar  7 09:39 input.tar.gz
[2026-03-07 12:13:44] -rw-r--r-- 2 boinc boinc     15845 Mar  7 09:39 start_atlas.sh
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc         0 Mar  7 09:39 boinc_setup_complete
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc      6205 Mar  7 09:39 init_data.xml
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc         0 Mar  7 09:39 boinc_lockfile
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc      2591 Mar  7 09:40 pandaJob.out
[2026-03-07 12:13:44] -rw------- 1 boinc boinc    999161 Mar  7 09:40 agis_schedconf.cvmfs.json
[2026-03-07 12:13:44] -rw------- 1 boinc boinc   1521291 Mar  7 09:40 agis_ddmendpoints.agis.ALL.json
[2026-03-07 12:13:44] -rw------- 1 boinc boinc       419 Mar  7 09:40 workernode_map.json
[2026-03-07 12:13:44] drwx------ 5 boinc boinc      4096 Mar  7 09:40 pilot3
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc       529 Mar  7 12:12 boinc_task_state.xml
[2026-03-07 12:13:44] -rw------- 1 boinc boinc 198448678 Mar  7 12:12 HITS.48966988._011044.pool.root.1
[2026-03-07 12:13:44] -rw------- 1 boinc boinc      1015 Mar  7 12:13 memory_monitor_summary.json
[2026-03-07 12:13:44] -rw------- 1 boinc boinc        95 Mar  7 12:13 pilot_heartbeat.json
[2026-03-07 12:13:44] -rw------- 1 boinc boinc    288666 Mar  7 12:13 log.48966988._011044.job.log.tgz.1
[2026-03-07 12:13:44] -rw------- 1 boinc boinc      6293 Mar  7 12:13 heartbeat.json
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc        27 Mar  7 12:13 wrapper_checkpoint.txt
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc      8192 Mar  7 12:13 boinc_mmap_file
[2026-03-07 12:13:44] -rw------- 1 boinc boinc       747 Mar  7 12:13 pilotlog.txt
[2026-03-07 12:13:44] -rw------- 1 boinc boinc   1306280 Mar  7 12:13 log.48966988._011044.job.log.1
[2026-03-07 12:13:44] -rw------- 1 boinc boinc       357 Mar  7 12:13 output.list
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc       620 Mar  7 12:13 runtime_log
[2026-03-07 12:13:44] -rw------- 1 boinc boinc   1607680 Mar  7 12:13 result.tar.gz
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc      8896 Mar  7 12:13 runtime_log.err
[2026-03-07 12:13:44] -rw------- 1 boinc boinc       657 Mar  7 12:13 hfdKDmcbmI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4lSLDm1SPUwm.diag
[2026-03-07 12:13:44] -rw-r--r-- 1 boinc boinc      6731 Mar  7 12:13 stderr.txt
[2026-03-07 12:13:44] HITS file was successfully produced:
[2026-03-07 12:13:44] -rw------- 1 boinc boinc 198448678 Mar  7 12:12 shared/HITS.pool.root.1
[2026-03-07 12:13:44]  *** Contents of shared directory: ***
[2026-03-07 12:13:44] total 406268
[2026-03-07 12:13:44] -rw-r--r-- 2 boinc boinc 215332053 Mar  7 09:39 ATLAS.root_0
[2026-03-07 12:13:44] -rw-r--r-- 2 boinc boinc    597974 Mar  7 09:39 input.tar.gz
[2026-03-07 12:13:44] -rw-r--r-- 2 boinc boinc     15845 Mar  7 09:39 start_atlas.sh
[2026-03-07 12:13:44] -rw------- 1 boinc boinc 198448678 Mar  7 12:12 HITS.pool.root.1
[2026-03-07 12:13:44] -rw------- 1 boinc boinc   1607680 Mar  7 12:13 result.tar.gz
12:13:46 (1571429): run_atlas exited; CPU time 17838.580299
12:13:46 (1571429): called boinc_finish(0)

</stderr_txt>
]]>

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