Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:29 (2468064): wrapper (7.7.26015): starting
16:18:29 (2468064): wrapper: running run_atlas (--nthreads 4)
[2026-03-07 16:18:29] Arguments: --nthreads 4
[2026-03-07 16:18:29] Threads: 4
[2026-03-07 16:18:29] Checking for CVMFS
[2026-03-07 16:18:29] No cvmfs_config command found, will try listing directly
[2026-03-07 16:18:29] CVMFS is ok
[2026-03-07 16:18:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-07 16:18:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-07 16:18:29] Further information can be found at the LHC@home message board.
[2026-03-07 16:18:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 16:18:29] Checking for apptainer binary...
[2026-03-07 16:18:29] which: no apptainer in ((null))
[2026-03-07 16:18:29] apptainer is not installed, using version from CVMFS
[2026-03-07 16:18:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 16:18:30] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot72/slots/5/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut21.grid.cesnet.cz
[2026-03-07 16:18:30] apptainer works
[2026-03-07 16:18:30] Set ATHENA_PROC_NUMBER=4
[2026-03-07 16:18:30] Set ATHENA_CORE_NUMBER=4
[2026-03-07 16:18:30] Starting ATLAS job with PandaID=7043317469
[2026-03-07 16:18:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot72/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 17:59:39]  *** The last 200 lines of the pilot log: ***
[2026-03-07 17:59:39]  is_tar=False
[2026-03-07 17:59:39]  lfn=log.48966988._010762.job.log.tgz.1
[2026-03-07 17:59:39]  mtime=0
[2026-03-07 17:59:39]  protocol_id=None
[2026-03-07 17:59:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-07 17:59:39]  replicas=None
[2026-03-07 17:59:39]  scope=mc23_13p6TeV
[2026-03-07 17:59:39]  status=None
[2026-03-07 17:59:39]  status_code=0
[2026-03-07 17:59:39]  storage_token=
[2026-03-07 17:59:39]  surl=/var/lib/boinc/var/slot72/slots/5/PanDA_Pilot-7043317469/log.48966988._010762.job.log.tgz.1
[2026-03-07 17:59:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/55/log.48966988._010762.job.log.tgz.1
[2026-03-07 17:59:39]  workdir=None
[2026-03-07 17:59:39] ]
[2026-03-07 17:59:39] 2026-03-07 16:58:40,897 | INFO     | transferring file log.48966988._010762.job.log.tgz.1 from /var/lib/boinc/var/slot72/slots/5/PanDA_Pilot-7043317469/log.48966988._010762.job.log.tgz.1 to /var/lib/b
[2026-03-07 17:59:39] 2026-03-07 16:58:40,897 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot72/slots/5/PanDA_Pilot-7043317469/log.48966988._010762.job.log.tgz.1 /var/lib/boinc/var/slot72/slots/5/lo
[2026-03-07 17:59:39] 2026-03-07 16:58:40,950 | INFO     | adding to output.list: log.48966988._010762.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/55/log.48966988._010762.job.log.tg
[2026-03-07 17:59:39] 2026-03-07 16:58:40,950 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 17:59:39] 2026-03-07 16:58:40,951 | INFO     | summary of transferred files:
[2026-03-07 17:59:39] 2026-03-07 16:58:40,951 | INFO     |  -- lfn=log.48966988._010762.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 17:59:39] 2026-03-07 16:58:40,951 | INFO     | stage-out finished correctly
[2026-03-07 17:59:39] 2026-03-07 16:58:41,002 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 17:59:39] 2026-03-07 16:58:41,402 | INFO     | time since job start (5958s) is within the limit (349056.0s)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,407 | INFO     | time since job start (5960s) is within the limit (349056.0s)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,602 | INFO     | job 7043317469 has state=finished
[2026-03-07 17:59:39] 2026-03-07 16:58:43,602 | INFO     | preparing for final server update for job 7043317469 in state='finished'
[2026-03-07 17:59:39] 2026-03-07 16:58:43,602 | INFO     | reading metadata from: /var/lib/boinc/var/slot72/slots/5/PanDA_Pilot-7043317469/jobReport.json
[2026-03-07 17:59:39] 2026-03-07 16:58:43,603 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot72/slots/5/workernode_map.json
[2026-03-07 17:59:39] 2026-03-07 16:58:43,604 | INFO     | this job has now completed (state=finished)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,604 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,604 | INFO     | log transfer has been attempted: DONE
[2026-03-07 17:59:39] 2026-03-07 16:58:43,604 | INFO     | job 7043317469 has finished - writing final server update
[2026-03-07 17:59:39] 2026-03-07 16:58:43,604 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1494392/.job.ad'
[2026-03-07 17:59:39] 2026-03-07 16:58:43,604 | INFO     | total number of processed events: 400 (read)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,623 | INFO     | using path: /var/lib/boinc/var/slot72/slots/5/PanDA_Pilot-7043317469/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,623 | INFO     | extracted standard info from prmon json
[2026-03-07 17:59:39] 2026-03-07 16:58:43,623 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 17:59:39] 2026-03-07 16:58:43,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 17:59:39] 2026-03-07 16:58:43,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 17:59:39] 2026-03-07 16:58:43,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 17:59:39] 2026-03-07 16:58:43,624 | INFO     | fitting pss+swap vs Time
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | sum of square deviations: 226022842.5
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | sum of deviations: -1422701200.4999998
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | mean x: 1772899831.5
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | mean y: 2350800.144444444
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | intersect: 11161872071.280113
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | chi2: 0.0011509501801327722
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | current memory leak: -6.29 B/s (using 90 data points, chi2=0.00)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | could have reported an average CPU frequency of 3567 MHz (7 samples)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | ..............................
[2026-03-07 17:59:39] 2026-03-07 16:58:43,625 | INFO     | . Timing measurements:
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | . get job = 0 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | . initial setup = 16 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | . payload setup = 19 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | . stage-in = 0 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | . payload execution = 5922 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | . stage-out = 0 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | . log creation = 0 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,626 | INFO     | ..............................
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | 
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | job summary report
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | --------------------------------------------------
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | PanDA job id: 7043317469
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | task id: 48966988
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | errors: (none)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | pilot state: finished 
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | transexitcode: 0
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | exeerrorcode: 0
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | exeerrordiag: 
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | exitcode: 0
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | exitmsg: OK
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | cpuconsumptiontime: 22469 s
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | nevents: 400
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | neventsw: 0
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | pid: 2487464
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | pgrp: 2487464
[2026-03-07 17:59:39] 2026-03-07 16:58:43,674 | INFO     | corecount: 4
[2026-03-07 17:59:39] 2026-03-07 16:58:43,675 | INFO     | event service: False
[2026-03-07 17:59:39] 2026-03-07 16:58:43,675 | INFO     | sizes: {0: 2295416, 1: 2295877, 11: 2295877, 5946: 2322602, 5947: 2331678, 5949: 2331816}
[2026-03-07 17:59:39] 2026-03-07 16:58:43,675 | INFO     | --------------------------------------------------
[2026-03-07 17:59:39] 2026-03-07 16:58:43,675 | INFO     | 
[2026-03-07 17:59:39] 2026-03-07 16:58:43,675 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot72/slots/5
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,712 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,712 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 17:59:39] 2026-03-07 16:58:43,712 | INFO     | job 7043317469 has completed (purged errors)
[2026-03-07 17:59:39] 2026-03-07 16:58:43,712 | INFO     | overall cleanup function is called
[2026-03-07 17:59:39] 2026-03-07 16:58:44,717 | INFO     | --- collectZombieJob: --- 10, [2487464]
[2026-03-07 17:59:39] 2026-03-07 16:58:44,718 | INFO     | zombie collector waiting for pid 2487464
[2026-03-07 17:59:39] 2026-03-07 16:58:44,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 17:59:39] 2026-03-07 16:58:44,718 | INFO     | collected zombie processes
[2026-03-07 17:59:39] 2026-03-07 16:58:44,718 | INFO     | will attempt to kill all subprocesses of pid=2487464
[2026-03-07 17:59:39] 2026-03-07 16:58:45,206 | INFO     | process IDs to be killed: [2487464] (in reverse order)
[2026-03-07 17:59:39] 2026-03-07 16:58:45,517 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 17:59:39] 2026-03-07 16:58:45,517 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 17:59:39] 2026-03-07 16:58:45,548 | INFO     | did not find any defunct processes belonging to 2487464
[2026-03-07 17:59:39] 2026-03-07 16:58:45,575 | INFO     | did not find any defunct processes belonging to 2487464
[2026-03-07 17:59:39] 2026-03-07 16:58:45,575 | INFO     | ready for new job
[2026-03-07 17:59:39] 2026-03-07 16:58:45,576 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 17:59:39] 2026-03-07 16:58:45,577 | INFO     | **************************************
[2026-03-07 17:59:39] 2026-03-07 16:58:45,577 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 17:59:39] 2026-03-07 16:58:45,577 | INFO     | **************************************
[2026-03-07 17:59:39] 2026-03-07 16:58:45,577 | INFO     | 
[2026-03-07 17:59:39] 2026-03-07 16:58:45,583 | INFO     | architecture information:
[2026-03-07 17:59:39] 2026-03-07 16:58:45,583 | INFO     | executing command: cat /etc/os-release
[2026-03-07 17:59:39] 2026-03-07 16:58:45,610 | INFO     | cat /etc/os-release:
[2026-03-07 17:59:39] NAME="CentOS Linux"
[2026-03-07 17:59:39] VERSION="7 (Core)"
[2026-03-07 17:59:39] ID="centos"
[2026-03-07 17:59:39] ID_LIKE="rhel fedora"
[2026-03-07 17:59:39] VERSION_ID="7"
[2026-03-07 17:59:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 17:59:39] ANSI_COLOR="0;31"
[2026-03-07 17:59:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 17:59:39] HOME_URL="https://www.centos.org/"
[2026-03-07 17:59:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 17:59:39] 
[2026-03-07 17:59:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 17:59:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 17:59:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 17:59:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 17:59:39] 
[2026-03-07 17:59:39] 2026-03-07 16:58:45,610 | INFO     | **************************************
[2026-03-07 17:59:39] 2026-03-07 16:58:46,116 | INFO     | executing command: df -mP /var/lib/boinc/var/slot72/slots/5
[2026-03-07 17:59:39] 2026-03-07 16:58:46,149 | INFO     | sufficient remaining disk space (20363345920 B)
[2026-03-07 17:59:39] 2026-03-07 16:58:46,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 17:59:39] 2026-03-07 16:58:46,150 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 17:59:39] 2026-03-07 16:58:46,150 | INFO     | update_server=False
[2026-03-07 17:59:39] 2026-03-07 16:58:46,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 17:59:39] 2026-03-07 16:58:46,198 | INFO     | all job control threads have been joined
[2026-03-07 17:59:39] 2026-03-07 16:58:46,429 | INFO     | all data control threads have been joined
[2026-03-07 17:59:39] 2026-03-07 16:58:46,505 | WARNING  | process 2487464 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 17:59:39] 2026-03-07 16:58:46,509 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 17:59:39] 2026-03-07 16:58:46,812 | INFO     | using path: /var/lib/boinc/var/slot72/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 17:59:39] 2026-03-07 16:58:46,877 | INFO     | all payload control threads have been joined
[2026-03-07 17:59:39] 2026-03-07 16:58:47,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 17:59:39] 2026-03-07 16:58:47,160 | INFO     | [job] retrieve thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,205 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,212 | INFO     | [job] control thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,279 | INFO     | number of running child processes to parent process 2487464: 1
[2026-03-07 17:59:39] 2026-03-07 16:58:47,279 | INFO     | maximum number of monitored processes: 6
[2026-03-07 17:59:39] 2026-03-07 16:58:47,279 | INFO     | aborting job monitoring since job object (job id=7043317469) has expired
[2026-03-07 17:59:39] 2026-03-07 16:58:47,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 17:59:39] 2026-03-07 16:58:47,279 | INFO     | will abort loop
[2026-03-07 17:59:39] 2026-03-07 16:58:47,283 | INFO     | [payload] failed_post thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,355 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,359 | INFO     | [job] validate thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,434 | INFO     | [data] control thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,537 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,680 | INFO     | [payload] validate_post thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,855 | INFO     | [data] copytool_in thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:47,882 | INFO     | [payload] control thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:48,284 | INFO     | [job] job monitor thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:48,515 | INFO     | [data] copytool_out thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:48,685 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 17:59:39] 2026-03-07 16:58:49,692 | INFO     | [job] queue monitor thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:51,124 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:58:56,859 | INFO     | job.realtimelogging is not enabled
[2026-03-07 17:59:39] 2026-03-07 16:58:57,864 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 17:59:39] 2026-03-07 16:59:17,062 | INFO     | PID=2476223 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 17:59:39] 2026-03-07 16:59:17,063 | INFO     | .. there are 58 such processes running
[2026-03-07 17:59:39] 2026-03-07 16:59:17,063 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 17:59:39] 2026-03-07 16:59:17,063 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 17:59:39] 2026-03-07 16:59:17,063 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 17:59:39] 2026-03-07 16:59:32,964 | INFO     | [monitor] cgroup control has ended
[2026-03-07 17:59:39] 2026-03-07 16:59:33,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22623401625408)>', '<ExcThread(monitor, started 22623148033792)>']
[2026-03-07 17:59:39] 2026-03-07 16:59:34,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 17:59:39] 2026-03-07 16:59:34,149 | INFO     | [monitor] control thread has ended
[2026-03-07 17:59:39] 2026-03-07 16:59:39,000 | INFO     | all workflow threads have been joined
[2026-03-07 17:59:39] 2026-03-07 16:59:39,001 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 17:59:39] 2026-03-07 16:59:39,001 | INFO     | traces error code: 0
[2026-03-07 17:59:39] 2026-03-07 16:59:39,001 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 17:59:39] 2026-03-07 16:59:39,141 [wrapper] ==== pilot stdout END ====
[2026-03-07 17:59:39] 2026-03-07 16:59:39,183 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 17:59:39] 2026-03-07 16:59:39,186 [wrapper] pilotpid: 2476223
[2026-03-07 17:59:39] 2026-03-07 16:59:39,198 [wrapper] Pilot exit status: 0
[2026-03-07 17:59:39] 2026-03-07 16:59:39,231 [wrapper] pandaids: 7043317469
[2026-03-07 17:59:39] 2026-03-07 16:59:39,451 [wrapper] cleanup supervisor_pilot 3453996 2476224
[2026-03-07 17:59:39] 2026-03-07 16:59:39,477 [wrapper] Test setup, not cleaning
[2026-03-07 17:59:39] 2026-03-07 16:59:39,495 [wrapper] apfmon messages muted
[2026-03-07 17:59:39] 2026-03-07 16:59:39,510 [wrapper] ==== wrapper stdout END ====
[2026-03-07 17:59:39] 2026-03-07 16:59:39,512 [wrapper] ==== wrapper stderr END ====
[2026-03-07 17:59:39]  *** Error codes and diagnostics ***
[2026-03-07 17:59:39]     "exeErrorCode": 0,
[2026-03-07 17:59:39]     "exeErrorDiag": "",
[2026-03-07 17:59:39]     "pilotErrorCode": 0,
[2026-03-07 17:59:39]     "pilotErrorDiag": "",
[2026-03-07 17:59:39]  *** Listing of results directory ***
[2026-03-07 17:59:39] total 404504
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc    584627 Mar  6 16:33 pilot3.tar.gz
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc      5111 Mar  6 16:48 queuedata.json
[2026-03-07 17:59:39] -rwx------. 1 boinc boinc     36322 Mar  6 16:49 runpilot2-wrapper.sh
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc       100 Mar  7 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 17:59:39] -rwxr-xr-x. 1 boinc boinc      7986 Mar  7 16:18 run_atlas
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc       105 Mar  7 16:18 job.xml
[2026-03-07 17:59:39] -rw-r--r--. 2 boinc boinc     15845 Mar  7 16:18 start_atlas.sh
[2026-03-07 17:59:39] drwxrwx--x. 2 boinc boinc      4096 Mar  7 16:18 shared
[2026-03-07 17:59:39] -rw-r--r--. 2 boinc boinc    597956 Mar  7 16:18 input.tar.gz
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc      6707 Mar  7 16:18 init_data.xml
[2026-03-07 17:59:39] -rw-r--r--. 2 boinc boinc 211713930 Mar  7 16:18 EVNT.48966985._000094.pool.root.1
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc         0 Mar  7 16:18 boinc_lockfile
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc      2588 Mar  7 16:18 pandaJob.out
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc    999177 Mar  7 16:19 agis_schedconf.cvmfs.json
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc   1521291 Mar  7 16:19 agis_ddmendpoints.agis.ALL.json
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc       444 Mar  7 16:19 workernode_map.json
[2026-03-07 17:59:39] drwx------. 5 boinc boinc      4096 Mar  7 16:19 pilot3
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc 196298675 Mar  7 17:58 HITS.48966988._010762.pool.root.1
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc       530 Mar  7 17:58 boinc_task_state.xml
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc      1031 Mar  7 17:58 memory_monitor_summary.json
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc    270900 Mar  7 17:58 log.48966988._010762.job.log.tgz.1
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc      6350 Mar  7 17:58 heartbeat.json
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc      8192 Mar  7 17:59 boinc_mmap_file
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc        27 Mar  7 17:59 wrapper_checkpoint.txt
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc        95 Mar  7 17:59 pilot_heartbeat.json
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc      5433 Mar  7 17:59 pilotlog.txt
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc    860611 Mar  7 17:59 log.48966988._010762.job.log.1
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc       357 Mar  7 17:59 output.list
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc       620 Mar  7 17:59 runtime_log
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc   1146880 Mar  7 17:59 result.tar.gz
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc      9204 Mar  7 17:59 runtime_log.err
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc       663 Mar  7 17:59 dgtKDmTbmI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmflSLDmJdFCKm.diag
[2026-03-07 17:59:39] -rw-r--r--. 1 boinc boinc     21435 Mar  7 17:59 stderr.txt
[2026-03-07 17:59:39] HITS file was successfully produced:
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc 196298675 Mar  7 17:58 shared/HITS.pool.root.1
[2026-03-07 17:59:39]  *** Contents of shared directory: ***
[2026-03-07 17:59:39] total 400180
[2026-03-07 17:59:39] -rw-r--r--. 2 boinc boinc     15845 Mar  7 16:18 start_atlas.sh
[2026-03-07 17:59:39] -rw-r--r--. 2 boinc boinc    597956 Mar  7 16:18 input.tar.gz
[2026-03-07 17:59:39] -rw-r--r--. 2 boinc boinc 211713930 Mar  7 16:18 ATLAS.root_0
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc 196298675 Mar  7 17:58 HITS.pool.root.1
[2026-03-07 17:59:39] -rw-------. 1 boinc boinc   1146880 Mar  7 17:59 result.tar.gz
17:59:40 (2468064): run_atlas exited; CPU time 22725.839620
17:59:40 (2468064): called boinc_finish(0)

</stderr_txt>
]]>

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