Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
00:41:07 (2404342): wrapper (7.7.26015): starting
00:41:07 (2404342): wrapper: running run_atlas (--nthreads 12)
[2026-03-07 00:41:07] Arguments: --nthreads 12
[2026-03-07 00:41:07] Threads: 12
[2026-03-07 00:41:07] Checking for CVMFS
[2026-03-07 00:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-07 00:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-07 00:41:08] Running cvmfs_config stat atlas.cern.ch
[2026-03-07 00:41:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-07 00:41:09] 2.12.7.0 991347 13932 72604 156990 0 188 2948959 4194305 2751 130560 0 32102211 99.997 504358 1741 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2026-03-07 00:41:09] CVMFS is ok
[2026-03-07 00:41:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-07 00:41:09] Checking for apptainer binary...
[2026-03-07 00:41:09] apptainer is not installed, using version from CVMFS
[2026-03-07 00:41:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-07 00:41:09] Trebeth
[2026-03-07 00:41:09] apptainer works
[2026-03-07 00:41:09] Set ATHENA_PROC_NUMBER=12
[2026-03-07 00:41:09] Set ATHENA_CORE_NUMBER=12
[2026-03-07 00:41:09] Starting ATLAS job with PandaID=7043122129
[2026-03-07 00:41:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-07 01:50:43]  *** The last 200 lines of the pilot log: ***
[2026-03-07 01:50:43]  status_code=0
[2026-03-07 01:50:43]  storage_token=
[2026-03-07 01:50:43]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/log.48966988._007209.job.log.tgz.1
[2026-03-07 01:50:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/61/log.48966988._007209.job.log.tgz.1
[2026-03-07 01:50:43]  workdir=None
[2026-03-07 01:50:43] ]
[2026-03-07 01:50:43] 2026-03-07 06:50:10,002 | INFO     | transferring file log.48966988._007209.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/log.48966988._007209.job.log.tgz.1 to /var/lib/boinc
[2026-03-07 01:50:43] 2026-03-07 06:50:10,003 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/log.48966988._007209.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.489669
[2026-03-07 01:50:43] 2026-03-07 06:50:10,019 | INFO     | adding to output.list: log.48966988._007209.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/99/61/log.48966988._007209.job.log.tg
[2026-03-07 01:50:43] 2026-03-07 06:50:10,020 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-07 01:50:43] 2026-03-07 06:50:10,020 | INFO     | summary of transferred files:
[2026-03-07 01:50:43] 2026-03-07 06:50:10,021 | INFO     |  -- lfn=log.48966988._007209.job.log.tgz.1, status_code=0, status=transferred
[2026-03-07 01:50:43] 2026-03-07 06:50:10,021 | INFO     | stage-out finished correctly
[2026-03-07 01:50:43] 2026-03-07 06:50:10,391 | INFO     | time since job start (4126s) is within the limit (349056.0s)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,454 | WARNING  | process 2413499 can no longer be monitored (due to stat problems) - aborting
[2026-03-07 01:50:43] 2026-03-07 06:50:10,454 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,455 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,455 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-03-07 01:50:43] 2026-03-07 06:50:10,455 | WARNING  | maxPSS not found in memory monitor output
[2026-03-07 01:50:43] 2026-03-07 06:50:10,456 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3917515 B
[2026-03-07 01:50:43] 2026-03-07 06:50:10,456 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15938 B
[2026-03-07 01:50:43] 2026-03-07 06:50:10,456 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-07 01:50:43] 2026-03-07 06:50:10,471 | INFO     | sufficient remaining disk space (395573198848 B)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,471 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,472 | INFO     | size of work directory /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129: 4212355 B (within 5033164800 B limit)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,472 | INFO     | pfn file=/var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/HITS.48966988._007209.pool.root.1 does not exist (skip from workdir size calculation)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,472 | INFO     | total size of present files: 0 B (workdir size: 4212355 B)
[2026-03-07 01:50:43] 2026-03-07 06:50:10,473 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/HITS.48966988._007209.pool.root.1 since it does not exist
[2026-03-07 01:50:43] 2026-03-07 06:50:10,711 | INFO     | number of running child processes to parent process 2413499: 1
[2026-03-07 01:50:43] 2026-03-07 06:50:10,711 | INFO     | maximum number of monitored processes: 6
[2026-03-07 01:50:43] 2026-03-07 06:50:10,829 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-07 01:50:43] 2026-03-07 06:50:11,844 | INFO     | job 7043122129 has state=finished
[2026-03-07 01:50:43] 2026-03-07 06:50:11,844 | INFO     | preparing for final server update for job 7043122129 in state='finished'
[2026-03-07 01:50:43] 2026-03-07 06:50:11,845 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/jobReport.json
[2026-03-07 01:50:43] 2026-03-07 06:50:11,847 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-03-07 01:50:43] 2026-03-07 06:50:11,848 | INFO     | this job has now completed (state=finished)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,848 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,848 | INFO     | log transfer has been attempted: DONE
[2026-03-07 01:50:43] 2026-03-07 06:50:11,848 | INFO     | job 7043122129 has finished - writing final server update
[2026-03-07 01:50:43] 2026-03-07 06:50:11,848 | INFO     | total number of processed events: 400 (read)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,876 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7043122129/memory_monitor_summary.json (trf name=prmon)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,877 | INFO     | extracted standard info from prmon json
[2026-03-07 01:50:43] 2026-03-07 06:50:11,877 | INFO     | extracted standard memory fields from prmon json
[2026-03-07 01:50:43] 2026-03-07 06:50:11,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-07 01:50:43] 2026-03-07 06:50:11,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-07 01:50:43] 2026-03-07 06:50:11,878 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-07 01:50:43] 2026-03-07 06:50:11,879 | INFO     | fitting pss+swap vs Time
[2026-03-07 01:50:43] 2026-03-07 06:50:11,880 | INFO     | sum of square deviations: 70364110.0
[2026-03-07 01:50:43] 2026-03-07 06:50:11,880 | INFO     | sum of deviations: 1883797181.0000017
[2026-03-07 01:50:43] 2026-03-07 06:50:11,880 | INFO     | mean x: 1772864239.0
[2026-03-07 01:50:43] 2026-03-07 06:50:11,880 | INFO     | mean y: 2675733.901639344
[2026-03-07 01:50:43] 2026-03-07 06:50:11,880 | INFO     | intersect: -47460678179.391846
[2026-03-07 01:50:43] 2026-03-07 06:50:11,881 | INFO     | chi2: 0.15598392794144525
[2026-03-07 01:50:43] 2026-03-07 06:50:11,881 | INFO     | current memory leak: 26.77 B/s (using 61 data points, chi2=0.16)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,881 | INFO     | could have reported an average CPU frequency of 2535 MHz (6 samples)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,881 | INFO     | ..............................
[2026-03-07 01:50:43] 2026-03-07 06:50:11,881 | INFO     | . Timing measurements:
[2026-03-07 01:50:43] 2026-03-07 06:50:11,881 | INFO     | . get job = 0 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,882 | INFO     | . initial setup = 6 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,882 | INFO     | . payload setup = 4 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,882 | INFO     | . stage-in = 0 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,882 | INFO     | . payload execution = 4104 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,882 | INFO     | . stage-out = 0 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,882 | INFO     | . log creation = 0 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,882 | INFO     | ..............................
[2026-03-07 01:50:43] 2026-03-07 06:50:11,970 | INFO     | 
[2026-03-07 01:50:43] 2026-03-07 06:50:11,970 | INFO     | job summary report
[2026-03-07 01:50:43] 2026-03-07 06:50:11,970 | INFO     | --------------------------------------------------
[2026-03-07 01:50:43] 2026-03-07 06:50:11,970 | INFO     | PanDA job id: 7043122129
[2026-03-07 01:50:43] 2026-03-07 06:50:11,970 | INFO     | task id: 48966988
[2026-03-07 01:50:43] 2026-03-07 06:50:11,970 | INFO     | errors: (none)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,970 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | pilot state: finished 
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | transexitcode: 0
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | exeerrorcode: 0
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | exeerrordiag: 
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | exitcode: 0
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | exitmsg: OK
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | cpuconsumptiontime: 41915 s
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | nevents: 400
[2026-03-07 01:50:43] 2026-03-07 06:50:11,971 | INFO     | neventsw: 0
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | pid: 2413499
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | pgrp: 2413499
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | corecount: 12
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | event service: False
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | sizes: {0: 2295416, 1: 2295877, 11: 2295877, 4112: 2321821, 4114: 2330833, 4115: 2330917, 4116: 2331239}
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | --------------------------------------------------
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | 
[2026-03-07 01:50:43] 2026-03-07 06:50:11,972 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-03-07 01:50:43] 2026-03-07 06:50:11,991 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,991 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,991 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,991 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,991 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,991 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,993 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,993 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,993 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,993 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-07 01:50:43] 2026-03-07 06:50:11,993 | INFO     | job 7043122129 has completed (purged errors)
[2026-03-07 01:50:43] 2026-03-07 06:50:11,993 | INFO     | overall cleanup function is called
[2026-03-07 01:50:43] 2026-03-07 06:50:13,002 | INFO     | --- collectZombieJob: --- 10, [2413499]
[2026-03-07 01:50:43] 2026-03-07 06:50:13,002 | INFO     | zombie collector waiting for pid 2413499
[2026-03-07 01:50:43] 2026-03-07 06:50:13,002 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-07 01:50:43] 2026-03-07 06:50:13,003 | INFO     | collected zombie processes
[2026-03-07 01:50:43] 2026-03-07 06:50:13,003 | INFO     | will attempt to kill all subprocesses of pid=2413499
[2026-03-07 01:50:43] 2026-03-07 06:50:13,241 | INFO     | process IDs to be killed: [2413499] (in reverse order)
[2026-03-07 01:50:43] 2026-03-07 06:50:13,309 | WARNING  | found no corresponding commands to process id(s)
[2026-03-07 01:50:43] 2026-03-07 06:50:13,310 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-07 01:50:43] 2026-03-07 06:50:13,316 | INFO     | did not find any defunct processes belonging to 2413499
[2026-03-07 01:50:43] 2026-03-07 06:50:13,320 | INFO     | did not find any defunct processes belonging to 2413499
[2026-03-07 01:50:43] 2026-03-07 06:50:13,321 | INFO     | ready for new job
[2026-03-07 01:50:43] 2026-03-07 06:50:13,321 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-07 01:50:43] 2026-03-07 06:50:13,323 | INFO     | **************************************
[2026-03-07 01:50:43] 2026-03-07 06:50:13,323 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-07 01:50:43] 2026-03-07 06:50:13,323 | INFO     | **************************************
[2026-03-07 01:50:43] 2026-03-07 06:50:13,323 | INFO     | 
[2026-03-07 01:50:43] 2026-03-07 06:50:13,345 | INFO     | architecture information:
[2026-03-07 01:50:43] 2026-03-07 06:50:13,346 | INFO     | executing command: cat /etc/os-release
[2026-03-07 01:50:43] 2026-03-07 06:50:13,358 | INFO     | cat /etc/os-release:
[2026-03-07 01:50:43] NAME="CentOS Linux"
[2026-03-07 01:50:43] VERSION="7 (Core)"
[2026-03-07 01:50:43] ID="centos"
[2026-03-07 01:50:43] ID_LIKE="rhel fedora"
[2026-03-07 01:50:43] VERSION_ID="7"
[2026-03-07 01:50:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-07 01:50:43] ANSI_COLOR="0;31"
[2026-03-07 01:50:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-07 01:50:43] HOME_URL="https://www.centos.org/"
[2026-03-07 01:50:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-07 01:50:43] 
[2026-03-07 01:50:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-07 01:50:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-07 01:50:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-07 01:50:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-07 01:50:43] 
[2026-03-07 01:50:43] 2026-03-07 06:50:13,359 | INFO     | **************************************
[2026-03-07 01:50:43] 2026-03-07 06:50:13,862 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-03-07 01:50:43] 2026-03-07 06:50:13,877 | INFO     | sufficient remaining disk space (395577393152 B)
[2026-03-07 01:50:43] 2026-03-07 06:50:13,878 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-07 01:50:43] 2026-03-07 06:50:13,878 | INFO     | current server update state: UPDATING_FINAL
[2026-03-07 01:50:43] 2026-03-07 06:50:13,878 | INFO     | update_server=False
[2026-03-07 01:50:43] 2026-03-07 06:50:13,878 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-07 01:50:43] 2026-03-07 06:50:13,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-07 01:50:43] 2026-03-07 06:50:13,879 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-07 01:50:43] 2026-03-07 06:50:14,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-07 01:50:43] 2026-03-07 06:50:14,219 | INFO     | aborting loop
[2026-03-07 01:50:43] 2026-03-07 06:50:14,314 | INFO     | all job control threads have been joined
[2026-03-07 01:50:43] 2026-03-07 06:50:14,481 | INFO     | all data control threads have been joined
[2026-03-07 01:50:43] 2026-03-07 06:50:14,883 | INFO     | [job] retrieve thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:14,884 | INFO     | [job] queue monitor thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:14,906 | INFO     | all payload control threads have been joined
[2026-03-07 01:50:43] 2026-03-07 06:50:14,908 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:14,918 | INFO     | [data] copytool_in thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,027 | INFO     | [payload] failed_post thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,139 | INFO     | [payload] execute_payloads thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,223 | INFO     | [job] job monitor thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,318 | INFO     | [job] control thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,447 | INFO     | [job] validate thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,487 | INFO     | [data] control thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,622 | INFO     | [payload] validate_post thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,652 | INFO     | [job] create_data_payload thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,884 | INFO     | [data] copytool_out thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,912 | INFO     | [payload] control thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:15,953 | INFO     | [payload] validate_pre thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:16,929 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-07 01:50:43] 2026-03-07 06:50:20,935 | INFO     | [data] queue_monitor thread has finished
[2026-03-07 01:50:43] 2026-03-07 06:50:29,894 | INFO     | [monitor] cgroup control has ended
[2026-03-07 01:50:43] 2026-03-07 06:50:31,262 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140148497135424)>', '<ExcThread(monitor, started 140147920197376)>']
[2026-03-07 01:50:43] 2026-03-07 06:50:36,287 | INFO     | all workflow threads have been joined
[2026-03-07 01:50:43] 2026-03-07 06:50:36,287 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-07 01:50:43] 2026-03-07 06:50:36,287 | INFO     | traces error code: 0
[2026-03-07 01:50:43] 2026-03-07 06:50:36,288 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-07 01:50:43] 2026-03-07 06:50:43,738 | INFO     | PID=2408726 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-07 01:50:43] 2026-03-07 06:50:43,738 | INFO     | .. there are 4 such processes running
[2026-03-07 01:50:43] 2026-03-07 06:50:43,739 | INFO     | found 0 job(s) in 20 queues
[2026-03-07 01:50:43] 2026-03-07 06:50:43,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-07 01:50:43] 2026-03-07 06:50:43,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-07 01:50:43] 2026-03-07 06:50:43,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-07 01:50:43] 2026-03-07 06:50:43,739 | INFO     | [monitor] control thread has ended
[2026-03-07 01:50:43] 2026-03-07 06:50:43,835 [wrapper] ==== pilot stdout END ====
[2026-03-07 01:50:43] 2026-03-07 06:50:43,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-07 01:50:43] 2026-03-07 06:50:43,839 [wrapper] pilotpid: 2408726
[2026-03-07 01:50:43] 2026-03-07 06:50:43,841 [wrapper] Pilot exit status: 0
[2026-03-07 01:50:43] 2026-03-07 06:50:43,848 [wrapper] pandaids: 7043122129
[2026-03-07 01:50:43] 2026-03-07 06:50:43,890 [wrapper] cleanup supervisor_pilot 2470800 2408727
[2026-03-07 01:50:43] 2026-03-07 06:50:43,892 [wrapper] Test setup, not cleaning
[2026-03-07 01:50:43] 2026-03-07 06:50:43,893 [wrapper] apfmon messages muted
[2026-03-07 01:50:43] 2026-03-07 06:50:43,895 [wrapper] ==== wrapper stdout END ====
[2026-03-07 01:50:43] 2026-03-07 06:50:43,897 [wrapper] ==== wrapper stderr END ====
[2026-03-07 01:50:43]  *** Error codes and diagnostics ***
[2026-03-07 01:50:43]     "exeErrorCode": 0,
[2026-03-07 01:50:43]     "exeErrorDiag": "",
[2026-03-07 01:50:43]     "pilotErrorCode": 0,
[2026-03-07 01:50:43]     "pilotErrorDiag": "",
[2026-03-07 01:50:43]  *** Listing of results directory ***
[2026-03-07 01:50:43] total 405352
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc    584627 Mar  6 06:48 pilot3.tar.gz
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc      5111 Mar  6 07:18 queuedata.json
[2026-03-07 01:50:43] -rwx------ 1 boinc boinc     36322 Mar  6 07:18 runpilot2-wrapper.sh
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc       100 Mar  7 00:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-07 01:50:43] -rwxr-xr-x 1 boinc boinc      7986 Mar  7 00:41 run_atlas
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc       105 Mar  7 00:41 job.xml
[2026-03-07 01:50:43] -rw-r--r-- 2 boinc boinc 212634274 Mar  7 00:41 EVNT.48966985._000372.pool.root.1
[2026-03-07 01:50:43] -rw-r--r-- 2 boinc boinc     15845 Mar  7 00:41 start_atlas.sh
[2026-03-07 01:50:43] drwxrwx--x 2 boinc boinc      4096 Mar  7 00:41 shared
[2026-03-07 01:50:43] -rw-r--r-- 2 boinc boinc    597972 Mar  7 00:41 input.tar.gz
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc      7579 Mar  7 00:41 init_data.xml
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc         0 Mar  7 00:41 boinc_lockfile
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc      2590 Mar  7 00:41 pandaJob.out
[2026-03-07 01:50:43] -rw------- 1 boinc boinc        50 Mar  7 00:41 setup.sh.local
[2026-03-07 01:50:43] -rw------- 1 boinc boinc    999155 Mar  7 00:41 agis_schedconf.cvmfs.json
[2026-03-07 01:50:43] -rw------- 1 boinc boinc   1521291 Mar  7 00:41 agis_ddmendpoints.agis.ALL.json
[2026-03-07 01:50:43] -rw------- 1 boinc boinc       430 Mar  7 00:41 workernode_map.json
[2026-03-07 01:50:43] drwx------ 5 boinc boinc      4096 Mar  7 00:41 pilot3
[2026-03-07 01:50:43] -rw------- 1 boinc boinc 196520253 Mar  7 01:49 HITS.48966988._007209.pool.root.1
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc       529 Mar  7 01:49 boinc_task_state.xml
[2026-03-07 01:50:43] -rw------- 1 boinc boinc      1031 Mar  7 01:50 memory_monitor_summary.json
[2026-03-07 01:50:43] -rw------- 1 boinc boinc    372117 Mar  7 01:50 log.48966988._007209.job.log.tgz.1
[2026-03-07 01:50:43] -rw------- 1 boinc boinc      6337 Mar  7 01:50 heartbeat.json
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc      8192 Mar  7 01:50 boinc_mmap_file
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc        27 Mar  7 01:50 wrapper_checkpoint.txt
[2026-03-07 01:50:43] -rw------- 1 boinc boinc       822 Mar  7 01:50 pilotlog.txt
[2026-03-07 01:50:43] -rw------- 1 boinc boinc        95 Mar  7 01:50 pilot_heartbeat.json
[2026-03-07 01:50:43] -rw------- 1 boinc boinc    622383 Mar  7 01:50 log.48966988._007209.job.log.1
[2026-03-07 01:50:43] -rw------- 1 boinc boinc       357 Mar  7 01:50 output.list
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc       620 Mar  7 01:50 runtime_log
[2026-03-07 01:50:43] -rw------- 1 boinc boinc   1013760 Mar  7 01:50 result.tar.gz
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc      9403 Mar  7 01:50 runtime_log.err
[2026-03-07 01:50:43] -rw------- 1 boinc boinc       650 Mar  7 01:50 AsCLDmJJjI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUvRLDm63akrm.diag
[2026-03-07 01:50:43] -rw-r--r-- 1 boinc boinc     22229 Mar  7 01:50 stderr.txt
[2026-03-07 01:50:43] HITS file was successfully produced:
[2026-03-07 01:50:43] -rw------- 1 boinc boinc 196520253 Mar  7 01:49 shared/HITS.pool.root.1
[2026-03-07 01:50:43]  *** Contents of shared directory: ***
[2026-03-07 01:50:43] total 401168
[2026-03-07 01:50:43] -rw-r--r-- 2 boinc boinc 212634274 Mar  7 00:41 ATLAS.root_0
[2026-03-07 01:50:43] -rw-r--r-- 2 boinc boinc     15845 Mar  7 00:41 start_atlas.sh
[2026-03-07 01:50:43] -rw-r--r-- 2 boinc boinc    597972 Mar  7 00:41 input.tar.gz
[2026-03-07 01:50:43] -rw------- 1 boinc boinc 196520253 Mar  7 01:49 HITS.pool.root.1
[2026-03-07 01:50:43] -rw------- 1 boinc boinc   1013760 Mar  7 01:50 result.tar.gz
01:50:45 (2404342): run_atlas exited; CPU time 41962.878754
01:50:45 (2404342): called boinc_finish(0)

</stderr_txt>
]]>

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