Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:20:19 (3135093): wrapper (7.7.26015): starting
03:20:19 (3135093): wrapper: running run_atlas (--nthreads 4)
[2026-03-08 03:20:19] Arguments: --nthreads 4
[2026-03-08 03:20:19] Threads: 4
[2026-03-08 03:20:19] Checking for CVMFS
[2026-03-08 03:20:19] No cvmfs_config command found, will try listing directly
[2026-03-08 03:20:19] CVMFS is ok
[2026-03-08 03:20:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 03:20:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-08 03:20:19] Further information can be found at the LHC@home message board.
[2026-03-08 03:20:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 03:20:19] Checking for apptainer binary...
[2026-03-08 03:20:19] which: no apptainer in ((null))
[2026-03-08 03:20:19] apptainer is not installed, using version from CVMFS
[2026-03-08 03:20:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 03:20:19] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot252/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut19.grid.cesnet.cz
[2026-03-08 03:20:19] apptainer works
[2026-03-08 03:20:19] Set ATHENA_PROC_NUMBER=4
[2026-03-08 03:20:19] Set ATHENA_CORE_NUMBER=4
[2026-03-08 03:20:19] Starting ATLAS job with PandaID=7043315474
[2026-03-08 03:20:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot252/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 04:59:47]  *** The last 200 lines of the pilot log: ***
[2026-03-08 04:59:47]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-03-08 04:59:47]  is_altstaged=None
[2026-03-08 04:59:47]  is_tar=False
[2026-03-08 04:59:47]  lfn=log.48966988._009851.job.log.tgz.1
[2026-03-08 04:59:47]  mtime=0
[2026-03-08 04:59:47]  protocol_id=None
[2026-03-08 04:59:47]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 04:59:47]  replicas=None
[2026-03-08 04:59:47]  scope=mc23_13p6TeV
[2026-03-08 04:59:47]  status=None
[2026-03-08 04:59:47]  status_code=0
[2026-03-08 04:59:47]  storage_token=
[2026-03-08 04:59:47]  surl=/var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043315474/log.48966988._009851.job.log.tgz.1
[2026-03-08 04:59:47]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/1d/log.48966988._009851.job.log.tgz.1
[2026-03-08 04:59:47]  workdir=None
[2026-03-08 04:59:47] ]
[2026-03-08 04:59:47] 2026-03-08 03:58:59,908 | INFO     | transferring file log.48966988._009851.job.log.tgz.1 from /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043315474/log.48966988._009851.job.log.tgz.1 to /var/lib/
[2026-03-08 04:59:47] 2026-03-08 03:58:59,908 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043315474/log.48966988._009851.job.log.tgz.1 /var/lib/boinc/var/slot252/slots/0/
[2026-03-08 04:59:47] 2026-03-08 03:58:59,926 | INFO     | adding to output.list: log.48966988._009851.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/1d/log.48966988._009851.job.log.tg
[2026-03-08 04:59:47] 2026-03-08 03:58:59,926 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 04:59:47] 2026-03-08 03:58:59,926 | INFO     | summary of transferred files:
[2026-03-08 04:59:47] 2026-03-08 03:58:59,926 | INFO     |  -- lfn=log.48966988._009851.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 04:59:47] 2026-03-08 03:58:59,927 | INFO     | stage-out finished correctly
[2026-03-08 04:59:47] 2026-03-08 03:58:59,977 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 04:59:47] 2026-03-08 03:59:00,026 | INFO     | job 7043315474 has state=finished
[2026-03-08 04:59:47] 2026-03-08 03:59:00,026 | INFO     | preparing for final server update for job 7043315474 in state='finished'
[2026-03-08 04:59:47] 2026-03-08 03:59:00,026 | INFO     | reading metadata from: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043315474/jobReport.json
[2026-03-08 04:59:47] 2026-03-08 03:59:00,028 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot252/slots/0/workernode_map.json
[2026-03-08 04:59:47] 2026-03-08 03:59:00,029 | INFO     | this job has now completed (state=finished)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,029 | INFO     | log transfer has been attempted: DONE
[2026-03-08 04:59:47] 2026-03-08 03:59:00,029 | INFO     | job 7043315474 has finished - writing final server update
[2026-03-08 04:59:47] 2026-03-08 03:59:00,029 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_815974/.job.ad'
[2026-03-08 04:59:47] 2026-03-08 03:59:00,029 | INFO     | total number of processed events: 400 (read)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,047 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/PanDA_Pilot-7043315474/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,048 | INFO     | extracted standard info from prmon json
[2026-03-08 04:59:47] 2026-03-08 03:59:00,048 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 04:59:47] 2026-03-08 03:59:00,048 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 04:59:47] 2026-03-08 03:59:00,048 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 04:59:47] 2026-03-08 03:59:00,048 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | fitting pss+swap vs Time
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | sum of square deviations: 226022842.5
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | sum of deviations: -745079589.4999999
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | mean x: 1772939470.5
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | mean y: 2341777.611111111
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | intersect: 5846799790.249755
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | chi2: 0.0005497953520359241
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | current memory leak: -3.30 B/s (using 90 data points, chi2=0.00)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | could have reported an average CPU frequency of 3567 MHz (7 samples)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,050 | INFO     | ..............................
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . Timing measurements:
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . get job = 0 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . initial setup = 4 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . payload setup = 4 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . stage-in = 0 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . payload execution = 5888 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . stage-out = 0 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | . log creation = 0 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,051 | INFO     | ..............................
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | 
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | job summary report
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | --------------------------------------------------
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | PanDA job id: 7043315474
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | task id: 48966988
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | errors: (none)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | pilot state: finished 
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | transexitcode: 0
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | exeerrorcode: 0
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | exeerrordiag: 
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | exitcode: 0
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | exitmsg: OK
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | cpuconsumptiontime: 22801 s
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | nevents: 400
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | neventsw: 0
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | pid: 3145403
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | pgrp: 3145403
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | corecount: 4
[2026-03-08 04:59:47] 2026-03-08 03:59:00,173 | INFO     | event service: False
[2026-03-08 04:59:47] 2026-03-08 03:59:00,174 | INFO     | sizes: {0: 2294750, 1: 2295880, 11: 2295880, 5897: 2322639, 5898: 2331855}
[2026-03-08 04:59:47] 2026-03-08 03:59:00,174 | INFO     | --------------------------------------------------
[2026-03-08 04:59:47] 2026-03-08 03:59:00,176 | INFO     | 
[2026-03-08 04:59:47] 2026-03-08 03:59:00,177 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot252/slots/0
[2026-03-08 04:59:47] 2026-03-08 03:59:00,196 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | job 7043315474 has completed (purged errors)
[2026-03-08 04:59:47] 2026-03-08 03:59:00,197 | INFO     | overall cleanup function is called
[2026-03-08 04:59:47] 2026-03-08 03:59:01,205 | INFO     | --- collectZombieJob: --- 10, [3145403]
[2026-03-08 04:59:47] 2026-03-08 03:59:01,205 | INFO     | zombie collector waiting for pid 3145403
[2026-03-08 04:59:47] 2026-03-08 03:59:01,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 04:59:47] 2026-03-08 03:59:01,205 | INFO     | collected zombie processes
[2026-03-08 04:59:47] 2026-03-08 03:59:01,205 | INFO     | will attempt to kill all subprocesses of pid=3145403
[2026-03-08 04:59:47] 2026-03-08 03:59:01,659 | INFO     | process IDs to be killed: [3145403] (in reverse order)
[2026-03-08 04:59:47] 2026-03-08 03:59:01,912 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 04:59:47] 2026-03-08 03:59:01,912 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 04:59:47] 2026-03-08 03:59:01,942 | INFO     | did not find any defunct processes belonging to 3145403
[2026-03-08 04:59:47] 2026-03-08 03:59:01,970 | INFO     | did not find any defunct processes belonging to 3145403
[2026-03-08 04:59:47] 2026-03-08 03:59:01,970 | INFO     | ready for new job
[2026-03-08 04:59:47] 2026-03-08 03:59:01,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 04:59:47] 2026-03-08 03:59:01,972 | INFO     | **************************************
[2026-03-08 04:59:47] 2026-03-08 03:59:01,972 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 04:59:47] 2026-03-08 03:59:01,972 | INFO     | **************************************
[2026-03-08 04:59:47] 2026-03-08 03:59:01,972 | INFO     | 
[2026-03-08 04:59:47] 2026-03-08 03:59:01,978 | INFO     | architecture information:
[2026-03-08 04:59:47] 2026-03-08 03:59:01,978 | INFO     | executing command: cat /etc/os-release
[2026-03-08 04:59:47] 2026-03-08 03:59:01,994 | INFO     | cat /etc/os-release:
[2026-03-08 04:59:47] NAME="CentOS Linux"
[2026-03-08 04:59:47] VERSION="7 (Core)"
[2026-03-08 04:59:47] ID="centos"
[2026-03-08 04:59:47] ID_LIKE="rhel fedora"
[2026-03-08 04:59:47] VERSION_ID="7"
[2026-03-08 04:59:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 04:59:47] ANSI_COLOR="0;31"
[2026-03-08 04:59:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 04:59:47] HOME_URL="https://www.centos.org/"
[2026-03-08 04:59:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 04:59:47] 
[2026-03-08 04:59:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 04:59:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 04:59:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 04:59:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 04:59:47] 
[2026-03-08 04:59:47] 2026-03-08 03:59:01,994 | INFO     | **************************************
[2026-03-08 04:59:47] 2026-03-08 03:59:02,497 | INFO     | executing command: df -mP /var/lib/boinc/var/slot252/slots/0
[2026-03-08 04:59:47] 2026-03-08 03:59:02,511 | INFO     | sufficient remaining disk space (19807600640 B)
[2026-03-08 04:59:47] 2026-03-08 03:59:02,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 04:59:47] 2026-03-08 03:59:02,512 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 04:59:47] 2026-03-08 03:59:02,512 | INFO     | update_server=False
[2026-03-08 04:59:47] 2026-03-08 03:59:02,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 04:59:47] 2026-03-08 03:59:02,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 04:59:47] 2026-03-08 03:59:02,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 04:59:47] 2026-03-08 03:59:03,371 | INFO     | all data control threads have been joined
[2026-03-08 04:59:47] 2026-03-08 03:59:03,517 | INFO     | [job] retrieve thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:03,616 | INFO     | [payload] validate_post thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:03,698 | INFO     | all payload control threads have been joined
[2026-03-08 04:59:47] 2026-03-08 03:59:03,774 | INFO     | all job control threads have been joined
[2026-03-08 04:59:47] 2026-03-08 03:59:04,153 | INFO     | [job] validate thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,210 | INFO     | [payload] failed_post thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,376 | INFO     | [data] control thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,515 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,592 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,703 | INFO     | [payload] control thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,749 | INFO     | [data] copytool_in thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,779 | INFO     | [job] control thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,866 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:04,885 | WARNING  | process 3145403 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 04:59:47] 2026-03-08 03:59:04,988 | INFO     | [data] copytool_out thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:05,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 04:59:47] 2026-03-08 03:59:05,182 | INFO     | using path: /var/lib/boinc/var/slot252/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 04:59:47] 2026-03-08 03:59:05,611 | INFO     | number of running child processes to parent process 3145403: 1
[2026-03-08 04:59:47] 2026-03-08 03:59:05,611 | INFO     | maximum number of monitored processes: 6
[2026-03-08 04:59:47] 2026-03-08 03:59:05,611 | INFO     | aborting job monitoring since job object (job id=7043315474) has expired
[2026-03-08 04:59:47] 2026-03-08 03:59:05,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 04:59:47] 2026-03-08 03:59:05,612 | INFO     | will abort loop
[2026-03-08 04:59:47] 2026-03-08 03:59:06,113 | INFO     | [job] queue monitor thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:06,178 | INFO     | job.realtimelogging is not enabled
[2026-03-08 04:59:47] 2026-03-08 03:59:06,518 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:06,613 | INFO     | [job] job monitor thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:07,183 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 04:59:47] 2026-03-08 03:59:32,850 | INFO     | PID=3139619 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 04:59:47] 2026-03-08 03:59:32,850 | INFO     | .. there are 53 such processes running
[2026-03-08 04:59:47] 2026-03-08 03:59:32,850 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 04:59:47] 2026-03-08 03:59:32,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 04:59:47] 2026-03-08 03:59:32,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 04:59:47] 2026-03-08 03:59:40,930 | INFO     | [monitor] cgroup control has ended
[2026-03-08 04:59:47] 2026-03-08 03:59:41,925 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23232678475584)>', '<ExcThread(monitor, started 23232439924480)>']
[2026-03-08 04:59:47] 2026-03-08 03:59:42,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 04:59:47] 2026-03-08 03:59:42,899 | INFO     | [monitor] control thread has ended
[2026-03-08 04:59:47] 2026-03-08 03:59:46,950 | INFO     | all workflow threads have been joined
[2026-03-08 04:59:47] 2026-03-08 03:59:46,950 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 04:59:47] 2026-03-08 03:59:46,950 | INFO     | traces error code: 0
[2026-03-08 04:59:47] 2026-03-08 03:59:46,950 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 04:59:47] 2026-03-08 03:59:47,121 [wrapper] ==== pilot stdout END ====
[2026-03-08 04:59:47] 2026-03-08 03:59:47,123 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 04:59:47] 2026-03-08 03:59:47,126 [wrapper] pilotpid: 3139619
[2026-03-08 04:59:47] 2026-03-08 03:59:47,128 [wrapper] Pilot exit status: 0
[2026-03-08 04:59:47] 2026-03-08 03:59:47,137 [wrapper] pandaids: 7043315474
[2026-03-08 04:59:47] 2026-03-08 03:59:47,252 [wrapper] cleanup supervisor_pilot 3817736 3139620
[2026-03-08 04:59:47] 2026-03-08 03:59:47,255 [wrapper] Test setup, not cleaning
[2026-03-08 04:59:47] 2026-03-08 03:59:47,258 [wrapper] apfmon messages muted
[2026-03-08 04:59:47] 2026-03-08 03:59:47,261 [wrapper] ==== wrapper stdout END ====
[2026-03-08 04:59:47] 2026-03-08 03:59:47,263 [wrapper] ==== wrapper stderr END ====
[2026-03-08 04:59:47]  *** Error codes and diagnostics ***
[2026-03-08 04:59:47]     "exeErrorCode": 0,
[2026-03-08 04:59:47]     "exeErrorDiag": "",
[2026-03-08 04:59:47]     "pilotErrorCode": 0,
[2026-03-08 04:59:47]     "pilotErrorDiag": "",
[2026-03-08 04:59:47]  *** Listing of results directory ***
[2026-03-08 04:59:47] total 403816
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc    584627 Mar  6 15:31 pilot3.tar.gz
[2026-03-08 04:59:47] -rwx------. 1 boinc boinc     36322 Mar  6 16:02 runpilot2-wrapper.sh
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc      5111 Mar  6 16:02 queuedata.json
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc       100 Mar  8 03:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 04:59:47] -rwxr-xr-x. 1 boinc boinc      7986 Mar  8 03:20 run_atlas
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc       105 Mar  8 03:20 job.xml
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc      6708 Mar  8 03:20 init_data.xml
[2026-03-08 04:59:47] -rw-r--r--. 2 boinc boinc 213346574 Mar  8 03:20 EVNT.48966985._000029.pool.root.1
[2026-03-08 04:59:47] -rw-r--r--. 2 boinc boinc     15845 Mar  8 03:20 start_atlas.sh
[2026-03-08 04:59:47] drwxrwx--x. 2 boinc boinc      4096 Mar  8 03:20 shared
[2026-03-08 04:59:47] -rw-r--r--. 2 boinc boinc    597964 Mar  8 03:20 input.tar.gz
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc         0 Mar  8 03:20 boinc_lockfile
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc      2589 Mar  8 03:20 pandaJob.out
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc    999177 Mar  8 03:20 agis_schedconf.cvmfs.json
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc   1521291 Mar  8 03:20 agis_ddmendpoints.agis.ALL.json
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc       444 Mar  8 03:20 workernode_map.json
[2026-03-08 04:59:47] drwx------. 5 boinc boinc      4096 Mar  8 03:20 pilot3
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc 193939125 Mar  8 04:58 HITS.48966988._009851.pool.root.1
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc      1028 Mar  8 04:58 memory_monitor_summary.json
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc    285786 Mar  8 04:58 log.48966988._009851.job.log.tgz.1
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc      6347 Mar  8 04:59 heartbeat.json
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc       529 Mar  8 04:59 boinc_task_state.xml
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc      8192 Mar  8 04:59 boinc_mmap_file
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc        27 Mar  8 04:59 wrapper_checkpoint.txt
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc        95 Mar  8 04:59 pilot_heartbeat.json
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc      5435 Mar  8 04:59 pilotlog.txt
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc    856831 Mar  8 04:59 log.48966988._009851.job.log.1
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc       357 Mar  8 04:59 output.list
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc       620 Mar  8 04:59 runtime_log
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc   1157120 Mar  8 04:59 result.tar.gz
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc       663 Mar  8 04:59 vgXMDmYslI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrZSLDmjhrTKm.diag
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc      9221 Mar  8 04:59 runtime_log.err
[2026-03-08 04:59:47] -rw-r--r--. 1 boinc boinc     21301 Mar  8 04:59 stderr.txt
[2026-03-08 04:59:47] HITS file was successfully produced:
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc 193939125 Mar  8 04:58 shared/HITS.pool.root.1
[2026-03-08 04:59:47]  *** Contents of shared directory: ***
[2026-03-08 04:59:47] total 399484
[2026-03-08 04:59:47] -rw-r--r--. 2 boinc boinc 213346574 Mar  8 03:20 ATLAS.root_0
[2026-03-08 04:59:47] -rw-r--r--. 2 boinc boinc     15845 Mar  8 03:20 start_atlas.sh
[2026-03-08 04:59:47] -rw-r--r--. 2 boinc boinc    597964 Mar  8 03:20 input.tar.gz
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc 193939125 Mar  8 04:58 HITS.pool.root.1
[2026-03-08 04:59:47] -rw-------. 1 boinc boinc   1157120 Mar  8 04:59 result.tar.gz
04:59:49 (3135093): run_atlas exited; CPU time 23042.530827
04:59:49 (3135093): called boinc_finish(0)

</stderr_txt>
]]>

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