Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-03-06 19:29:53 (1376015): vboxwrapper version 26210
2026-03-06 19:29:53 (1376015): BOINC client version: 8.2.8
2026-03-06 19:29:53 (1376015): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-03-06 19:29:53 (1376015): Successfully copied 'init_data.xml' to the shared directory.
2026-03-06 19:29:53 (1376015): Create VM. (boinc_c23c059e41f6b7f1, slot#17)
2026-03-06 19:29:53 (1376015): Setting Memory Size for VM. (4096MB)
2026-03-06 19:29:54 (1376015): Setting CPU Count for VM. (1)
2026-03-06 19:29:54 (1376015): Setting Chipset Options for VM.
2026-03-06 19:29:54 (1376015): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-03-06 19:29:54 (1376015): Setting Boot Options for VM.
2026-03-06 19:29:54 (1376015): Setting Network Configuration for NAT. (Driver: virtio)
2026-03-06 19:29:54 (1376015): Enabling VM Network Access.
2026-03-06 19:29:55 (1376015): Disabling USB Support for VM.
2026-03-06 19:29:55 (1376015): Disabling COM Port Support for VM.
2026-03-06 19:29:55 (1376015): Disabling LPT Port Support for VM.
2026-03-06 19:29:55 (1376015): Disabling Audio Support for VM.
2026-03-06 19:29:55 (1376015): Disabling Clipboard Support for VM.
2026-03-06 19:29:55 (1376015): Disabling Drag and Drop Support for VM.
2026-03-06 19:29:55 (1376015): Adding storage controller(s) to VM.
2026-03-06 19:29:56 (1376015): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-03-06 19:29:56 (1376015): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-03-06 19:29:56 (1376015): forwarding host port 39563 to guest port 80
2026-03-06 19:29:56 (1376015): Enabling remote desktop for VM.
2026-03-06 19:29:56 (1376015): Enabling shared directory for VM.
2026-03-06 19:29:57 (1376015): Starting VM using VBoxManage interface. (boinc_c23c059e41f6b7f1, slot#17)
2026-03-06 19:29:58 (1376015): Successfully started VM. (PID = '1376416')
2026-03-06 19:29:58 (1376015): Reporting VM Process ID to BOINC.
2026-03-06 19:29:58 (1376015): Guest Log: BIOS: VirtualBox 7.2.2
2026-03-06 19:29:58 (1376015): Guest Log: CPUID EDX: 0x178bfbff
2026-03-06 19:29:58 (1376015): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-03-06 19:29:58 (1376015): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-03-06 19:29:58 (1376015): VM state change detected. (old = 'poweredoff', new = 'running')
2026-03-06 19:29:58 (1376015): Detected: Web Application Enabled (http://localhost:39563)
2026-03-06 19:29:58 (1376015): Detected: Remote Desktop Enabled (localhost:36545)
2026-03-06 19:29:58 (1376015): Preference change detected
2026-03-06 19:29:58 (1376015): Setting CPU throttle for VM. (100%)
2026-03-06 19:29:58 (1376015): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-03-06 19:30:00 (1376015): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-03-06 19:30:00 (1376015): Guest Log: BIOS: Booting from Hard Disk...
2026-03-06 19:30:03 (1376015): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-03-06 19:30:03 (1376015): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-03-06 19:30:03 (1376015): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-03-06 19:30:10 (1376015): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-03-06 19:30:10 (1376015): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-03-06 19:30:27 (1376015): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.000372 main     Log opened 2026-03-06T18:30:24.362104000Z
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.000650 main     OS Product: Linux
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.000707 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.000763 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.000816 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.000817 main     Process ID: 1244
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.000818 main     Package type: LINUX_64BITS_GENERIC
2026-03-06 19:30:27 (1376015): Guest Log: 00:00:00.003986 main     5.2.32 r132073 started. Verbose level = 0
2026-03-06 19:30:27 (1376015): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-03-06 19:30:27 (1376015): Guest Log: [INFO] Mounting shared directory
2026-03-06 19:30:27 (1376015): Guest Log: [INFO] Checking for init_data.xml
2026-03-06 19:30:31 (1376015): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-03-06 19:30:31 (1376015): Guest Log: [INFO] Detected branch: prod
2026-03-06 19:30:31 (1376015): Guest Log: This is the prod version of the ATLAS job wrapper
2026-03-06 19:30:31 (1376015): Guest Log: Copying input files
2026-03-06 19:30:33 (1376015): Guest Log: Copied input files into RunAtlas.
2026-03-06 19:30:34 (1376015): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-03-06 19:30:41 (1376015): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-03-06 19:30:41 (1376015): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-03-06 19:30:41 (1376015): Guest Log: 2.6.3.0 1513 0 29500 156965 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-03-06 19:30:42 (1376015): Guest Log: copied the webapp to /var/www
2026-03-06 19:30:42 (1376015): Guest Log: core_number=1
2026-03-06 19:30:43 (1376015): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-03-06 19:30:43 (1376015): Guest Log:  *** Starting ATLAS job. (PandaID=7043316919 taskID=48967059) ***
2026-03-06 21:08:59 (1376015): Status Report: Elapsed Time: '6000.000000'
2026-03-06 21:08:59 (1376015): Status Report: CPU Time: '5894.560000'
2026-03-06 22:47:59 (1376015): Status Report: Elapsed Time: '12000.000000'
2026-03-06 22:47:59 (1376015): Status Report: CPU Time: '11821.210000'
2026-03-07 00:27:00 (1376015): Status Report: Elapsed Time: '18000.000000'
2026-03-07 00:27:00 (1376015): Status Report: CPU Time: '17746.270000'
2026-03-07 02:06:00 (1376015): Status Report: Elapsed Time: '24000.000000'
2026-03-07 02:06:00 (1376015): Status Report: CPU Time: '23672.330000'
2026-03-07 03:45:01 (1376015): Status Report: Elapsed Time: '30000.000000'
2026-03-07 03:45:01 (1376015): Status Report: CPU Time: '29598.640000'
2026-03-07 05:24:01 (1376015): Status Report: Elapsed Time: '36000.000000'
2026-03-07 05:24:01 (1376015): Status Report: CPU Time: '35524.820000'
2026-03-07 07:03:02 (1376015): Status Report: Elapsed Time: '42000.000000'
2026-03-07 07:03:02 (1376015): Status Report: CPU Time: '41449.630000'
2026-03-07 08:42:02 (1376015): Status Report: Elapsed Time: '48000.000000'
2026-03-07 08:42:02 (1376015): Status Report: CPU Time: '47376.120000'
2026-03-07 10:21:03 (1376015): Status Report: Elapsed Time: '54000.000000'
2026-03-07 10:21:03 (1376015): Status Report: CPU Time: '53302.040000'
2026-03-07 12:00:03 (1376015): Status Report: Elapsed Time: '60000.000000'
2026-03-07 12:00:03 (1376015): Status Report: CPU Time: '59227.090000'
2026-03-07 13:39:04 (1376015): Status Report: Elapsed Time: '66000.000000'
2026-03-07 13:39:04 (1376015): Status Report: CPU Time: '65151.680000'
2026-03-07 15:18:04 (1376015): Status Report: Elapsed Time: '72000.000000'
2026-03-07 15:18:04 (1376015): Status Report: CPU Time: '71075.960000'
2026-03-07 16:57:05 (1376015): Status Report: Elapsed Time: '78000.000000'
2026-03-07 16:57:05 (1376015): Status Report: CPU Time: '76999.350000'
2026-03-07 18:36:05 (1376015): Status Report: Elapsed Time: '84000.000000'
2026-03-07 18:36:05 (1376015): Status Report: CPU Time: '82924.330000'
2026-03-07 19:28:01 (1376015): Guest Log:  *** Job finished ***
2026-03-07 19:28:01 (1376015): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:47,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:47,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:49,143 | INFO     | [monitor] cgroup control has ended
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:49,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626578003776)>', '<ExcThread(monitor, started 139626131994368)>']
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:49,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:49,941 | INFO     | [monitor] control thread has ended
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,251 | INFO     | all workflow threads have been joined
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,252 | INFO     | end of generic workflow (traces error code: 0)
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,252 | INFO     | traces error code: 0
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,252 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,388 [wrapper] ==== pilot stdout END ====
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,395 [wrapper] ==== wrapper stdout RESUME ====
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,402 [wrapper] pilotpid: 5851
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,409 [wrapper] Pilot exit status: 0
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,451 [wrapper] pandaids: 7043316919
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,491 [wrapper] cleanup supervisor_pilot 16486 5852
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,499 [wrapper] Test setup, not cleaning
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,506 [wrapper] apfmon messages muted
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,513 [wrapper] ==== wrapper stdout END ====
2026-03-07 19:28:01 (1376015): Guest Log: 2026-03-07 18:21:54,519 [wrapper] ==== wrapper stderr END ====
2026-03-07 19:28:01 (1376015): Guest Log:  *** Error codes and diagnostics ***
2026-03-07 19:28:01 (1376015): Guest Log:     "exeErrorCode": 0,
2026-03-07 19:28:01 (1376015): Guest Log:     "exeErrorDiag": "",
2026-03-07 19:28:01 (1376015): Guest Log:     "pilotErrorCode": 0,
2026-03-07 19:28:01 (1376015): Guest Log:     "pilotErrorDiag": "",
2026-03-07 19:28:01 (1376015): Guest Log:  *** Listing of results directory ***
2026-03-07 19:28:01 (1376015): Guest Log: total 277220
2026-03-07 19:28:01 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Mar  6 15:29 pilot3.tar.gz
2026-03-07 19:28:01 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Mar  6 15:30 queuedata.json
2026-03-07 19:28:01 (1376015): Guest Log: -rwx------. 1 atlas atlas     36322 Mar  6 15:31 runpilot2-wrapper.sh
2026-03-07 19:28:01 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Mar  6 18:30 start_atlas.sh
2026-03-07 19:28:01 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas    597939 Mar  6 18:30 input.tar.gz
2026-03-07 19:28:01 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas     10031 Mar  6 18:30 init_data.xml
2026-03-07 19:28:01 (1376015): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Mar  6 18:30 EVNT.48967057._000019.pool.root.1 -> /data/./ATLAS.root_0
2026-03-07 19:28:01 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Mar  6 18:30 pandaJob.out
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas        50 Mar  6 18:30 setup.sh.local
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas    999496 Mar  6 18:31 agis_schedconf.cvmfs.json
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas       418 Mar  6 18:31 workernode_map.json
2026-03-07 19:28:01 (1376015): Guest Log: drwx------. 5 atlas atlas      4096 Mar  6 18:31 pilot3
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas 254264824 Mar  7 18:20 HITS.48967059._000418.pool.root.1
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas      1015 Mar  7 18:21 memory_monitor_summary.json
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas   1521291 Mar  7 18:21 agis_ddmendpoints.agis.ALL.json
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas   1298428 Mar  7 18:21 log.48967059._000418.job.log.tgz.1
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas        97 Mar  7 18:21 pilot_heartbeat.json
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas      6325 Mar  7 18:21 heartbeat.json
2026-03-07 19:28:01 (1376015): Guest Log: -rw-------. 1 atlas atlas      4801 Mar  7 18:21 pilotlog.txt
2026-03-07 19:28:02 (1376015): Guest Log: -rw-------. 1 atlas atlas  11570888 Mar  7 18:21 log.48967059._000418.job.log.1
2026-03-07 19:28:02 (1376015): Guest Log: -rw-------. 1 atlas atlas       357 Mar  7 18:21 output.list
2026-03-07 19:28:02 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas       620 Mar  7 18:21 runtime_log
2026-03-07 19:28:02 (1376015): Guest Log: -rw-------. 1 atlas atlas  12881920 Mar  7 18:21 result.tar.gz
2026-03-07 19:28:02 (1376015): Guest Log: -rw-------. 1 atlas atlas       655 Mar  7 18:21 VKsKDm5JmI9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNPQLDmWLGWmm.diag
2026-03-07 19:28:02 (1376015): Guest Log: -rw-r--r--. 1 atlas atlas      9108 Mar  7 18:21 runtime_log.err
2026-03-07 19:28:02 (1376015): Guest Log: Looking for outputfile HITS.48967059._000418.pool.root.1
2026-03-07 19:28:02 (1376015): Guest Log: HITS file was successfully produced
2026-03-07 19:28:02 (1376015): Guest Log: -rw-------. 1 atlas atlas 254264824 Mar  7 18:20 /home/atlas/RunAtlas/HITS.48967059._000418.pool.root.1
2026-03-07 19:28:02 (1376015): Guest Log: Successfully finished the ATLAS job!
2026-03-07 19:28:02 (1376015): Guest Log: Copying the results back to the shared directory!
2026-03-07 19:28:02 (1376015): Guest Log:  *** Contents of shared directory: ***
2026-03-07 19:28:02 (1376015): Guest Log: total 238292
2026-03-07 19:28:02 (1376015): Guest Log: -rw-r--r--. 1 root root 230496385 Mar  6 18:29 ATLAS.root_0
2026-03-07 19:28:02 (1376015): Guest Log: -rw-r--r--. 1 root root     10031 Mar  6 18:29 init_data.xml
2026-03-07 19:28:02 (1376015): Guest Log: -rw-r--r--. 1 root root    597939 Mar  6 18:29 input.tar.gz
2026-03-07 19:28:02 (1376015): Guest Log: -rw-r--r--. 1 root root  12881920 Mar  7  2026 result.tar.gz
2026-03-07 19:28:02 (1376015): Guest Log: -rw-r--r--. 1 root root     15845 Mar  6 18:29 start_atlas.sh
2026-03-07 19:28:02 (1376015): Guest Log:  *** Success! Shutting down the machine. ***
2026-03-07 19:28:02 (1376015): VM Completion File Detected.
2026-03-07 19:28:02 (1376015): Powering off VM.
2026-03-07 19:28:03 (1376015): Successfully stopped VM.
2026-03-07 19:28:03 (1376015): Deregistering VM. (boinc_c23c059e41f6b7f1, slot#17)
2026-03-07 19:28:03 (1376015): Removing network bandwidth throttle group from VM.
2026-03-07 19:28:03 (1376015): Removing VM from VirtualBox.
2026-03-07 19:28:08 (1376015): called boinc_finish(0)

</stderr_txt>
]]>

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