Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:16:50 (1962484): wrapper (7.7.26015): starting
04:16:50 (1962484): wrapper: running run_atlas (--nthreads 4)
[2026-03-13 04:16:50] Arguments: --nthreads 4
[2026-03-13 04:16:50] Threads: 4
[2026-03-13 04:16:50] Checking for CVMFS
[2026-03-13 04:16:50] No cvmfs_config command found, will try listing directly
[2026-03-13 04:16:50] CVMFS is ok
[2026-03-13 04:16:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-13 04:16:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-13 04:16:50] Further information can be found at the LHC@home message board.
[2026-03-13 04:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-13 04:16:50] Checking for apptainer binary...
[2026-03-13 04:16:50] which: no apptainer in ((null))
[2026-03-13 04:16:50] apptainer is not installed, using version from CVMFS
[2026-03-13 04:16:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-13 04:16:50] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-03-13 04:16:50] apptainer works
[2026-03-13 04:16:50] Set ATHENA_PROC_NUMBER=4
[2026-03-13 04:16:50] Set ATHENA_CORE_NUMBER=4
[2026-03-13 04:16:50] Starting ATLAS job with PandaID=7040501583
[2026-03-13 04:16:50] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-13 07:51:03]  *** The last 200 lines of the pilot log: ***
[2026-03-13 07:51:03] 2026-03-13 06:38:46,635 | INFO     | job 7040501583 has state=finished
[2026-03-13 07:51:03] 2026-03-13 06:38:46,635 | INFO     | preparing for final server update for job 7040501583 in state='finished'
[2026-03-13 07:51:03] 2026-03-13 06:38:46,635 | INFO     | reading metadata from: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7040501583/jobReport.json
[2026-03-13 07:51:03] 2026-03-13 06:38:46,638 | INFO     | added worker_node to metadata from /var/lib/boinc/var/slot48/slots/0/workernode_map.json
[2026-03-13 07:51:03] 2026-03-13 06:38:46,638 | INFO     | this job has now completed (state=finished)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,639 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,639 | INFO     | log transfer has been attempted: DONE
[2026-03-13 07:51:03] 2026-03-13 06:38:46,639 | INFO     | job 7040501583 has finished - writing final server update
[2026-03-13 07:51:03] 2026-03-13 06:38:46,639 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1357793/.job.ad'
[2026-03-13 07:51:03] 2026-03-13 06:38:46,639 | INFO     | total number of processed events: 400 (read)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,663 | INFO     | using path: /var/lib/boinc/var/slot48/slots/0/PanDA_Pilot-7040501583/memory_monitor_summary.json (trf name=prmon)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,664 | INFO     | extracted standard info from prmon json
[2026-03-13 07:51:03] 2026-03-13 06:38:46,664 | INFO     | extracted standard memory fields from prmon json
[2026-03-13 07:51:03] 2026-03-13 06:38:46,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-13 07:51:03] 2026-03-13 06:38:46,665 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-13 07:51:03] 2026-03-13 06:38:46,665 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-13 07:51:03] 2026-03-13 06:38:46,668 | INFO     | fitting pss+swap vs Time
[2026-03-13 07:51:03] 2026-03-13 06:38:46,669 | INFO     | sum of square deviations: 2406926989.5
[2026-03-13 07:51:03] 2026-03-13 06:38:46,670 | INFO     | sum of deviations: -6709057672.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,670 | INFO     | mean x: 1773377876.5
[2026-03-13 07:51:03] 2026-03-13 06:38:46,670 | INFO     | mean y: 2369714.878787879
[2026-03-13 07:51:03] 2026-03-13 06:38:46,670 | INFO     | intersect: 4945475384.302914
[2026-03-13 07:51:03] 2026-03-13 06:38:46,671 | INFO     | chi2: 1.4001036423080806
[2026-03-13 07:51:03] 2026-03-13 06:38:46,671 | INFO     | sum of square deviations: 2229146912.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,673 | INFO     | sum of deviations: -6337453235.999996
[2026-03-13 07:51:03] 2026-03-13 06:38:46,673 | INFO     | mean x: 1773377724.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,673 | INFO     | mean y: 2370033.694300518
[2026-03-13 07:51:03] 2026-03-13 06:38:46,673 | INFO     | intersect: 5044073806.161545
[2026-03-13 07:51:03] 2026-03-13 06:38:46,673 | INFO     | chi2: 1.3998397053362384
[2026-03-13 07:51:03] 2026-03-13 06:38:46,673 | INFO     | current chi2=1.3998397053362384 (change=0.018851245284037404 %)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,673 | INFO     | right removable region: 192
[2026-03-13 07:51:03] 2026-03-13 06:38:46,674 | INFO     | sum of square deviations: 2229146912.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,675 | INFO     | sum of deviations: -31236397062.999996
[2026-03-13 07:51:03] 2026-03-13 06:38:46,675 | INFO     | mean x: 1773378029.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,675 | INFO     | mean y: 2390460.5699481866
[2026-03-13 07:51:03] 2026-03-13 06:38:46,675 | INFO     | intersect: 24852228736.56973
[2026-03-13 07:51:03] 2026-03-13 06:38:46,676 | INFO     | chi2: 0.07507156541195063
[2026-03-13 07:51:03] 2026-03-13 06:38:46,676 | INFO     | current chi2=0.07507156541195063 (change=94.63814226722567 %)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,676 | INFO     | sum of square deviations: 2060343747.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,677 | INFO     | sum of deviations: -29099786754.499996
[2026-03-13 07:51:03] 2026-03-13 06:38:46,677 | INFO     | mean x: 1773378181.5
[2026-03-13 07:51:03] 2026-03-13 06:38:46,677 | INFO     | mean y: 2388510.7074468085
[2026-03-13 07:51:03] 2026-03-13 06:38:46,678 | INFO     | intersect: 25049144418.246304
[2026-03-13 07:51:03] 2026-03-13 06:38:46,678 | INFO     | chi2: 0.07209589823592184
[2026-03-13 07:51:03] 2026-03-13 06:38:46,678 | INFO     | current chi2=0.07209589823592184 (change=3.963773979801804 %)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,678 | INFO     | left removable region: 20
[2026-03-13 07:51:03] 2026-03-13 06:38:46,678 | INFO     | sum of square deviations: 1577789583.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,679 | INFO     | sum of deviations: -20393162967.0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,680 | INFO     | mean x: 1773378303.5
[2026-03-13 07:51:03] 2026-03-13 06:38:46,680 | INFO     | mean y: 2381517.8488372094
[2026-03-13 07:51:03] 2026-03-13 06:38:46,680 | INFO     | intersect: 22923557532.11429
[2026-03-13 07:51:03] 2026-03-13 06:38:46,680 | INFO     | chi2: 0.061929635363770615
[2026-03-13 07:51:03] 2026-03-13 06:38:46,680 | INFO     | current memory leak: -12.93 B/s (using 172 data points, chi2=0.06)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,681 | INFO     | could have reported an average CPU frequency of 2704 MHz (10 samples)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,681 | INFO     | ..............................
[2026-03-13 07:51:03] 2026-03-13 06:38:46,681 | INFO     | . Timing measurements:
[2026-03-13 07:51:03] 2026-03-13 06:38:46,681 | INFO     | . get job = 0 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,681 | INFO     | . initial setup = 9 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,681 | INFO     | . payload setup = 10 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,681 | INFO     | . stage-in = 0 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,682 | INFO     | . payload execution = 12062 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,682 | INFO     | . stage-out = 1 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,682 | INFO     | . log creation = 0 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,682 | INFO     | ..............................
[2026-03-13 07:51:03] 2026-03-13 06:38:46,775 | INFO     | 
[2026-03-13 07:51:03] 2026-03-13 06:38:46,775 | INFO     | job summary report
[2026-03-13 07:51:03] 2026-03-13 06:38:46,775 | INFO     | --------------------------------------------------
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | PanDA job id: 7040501583
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | task id: 48958627
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | errors: (none)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | pilot state: finished 
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | transexitcode: 0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | exeerrorcode: 0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | exeerrordiag: 
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | exitcode: 0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | exitmsg: OK
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | cpuconsumptiontime: 45480 s
[2026-03-13 07:51:03] 2026-03-13 06:38:46,776 | INFO     | nevents: 400
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | neventsw: 0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | pid: 1980756
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | pgrp: 1980756
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | corecount: 4
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | event service: False
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | sizes: {0: 2279919, 1: 2280209, 11: 2280209, 12077: 2310401, 12078: 2319421, 12080: 2319799}
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | --------------------------------------------------
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | 
[2026-03-13 07:51:03] 2026-03-13 06:38:46,777 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot48/slots/0
[2026-03-13 07:51:03] 2026-03-13 06:38:46,810 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,810 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-13 07:51:03] 2026-03-13 06:38:46,812 | INFO     | job 7040501583 has completed (purged errors)
[2026-03-13 07:51:03] 2026-03-13 06:38:46,813 | INFO     | overall cleanup function is called
[2026-03-13 07:51:03] 2026-03-13 06:38:47,822 | INFO     | --- collectZombieJob: --- 10, [1980756]
[2026-03-13 07:51:03] 2026-03-13 06:38:47,822 | INFO     | zombie collector waiting for pid 1980756
[2026-03-13 07:51:03] 2026-03-13 06:38:47,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-13 07:51:03] 2026-03-13 06:38:47,822 | INFO     | collected zombie processes
[2026-03-13 07:51:03] 2026-03-13 06:38:47,822 | INFO     | will attempt to kill all subprocesses of pid=1980756
[2026-03-13 07:51:03] 2026-03-13 06:38:48,684 | INFO     | process IDs to be killed: [1980756] (in reverse order)
[2026-03-13 07:51:03] 2026-03-13 06:38:49,021 | WARNING  | found no corresponding commands to process id(s)
[2026-03-13 07:51:03] 2026-03-13 06:38:49,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-13 07:51:03] 2026-03-13 06:38:49,055 | INFO     | did not find any defunct processes belonging to 1980756
[2026-03-13 07:51:03] 2026-03-13 06:38:49,090 | INFO     | did not find any defunct processes belonging to 1980756
[2026-03-13 07:51:03] 2026-03-13 06:38:49,090 | INFO     | ready for new job
[2026-03-13 07:51:03] 2026-03-13 06:38:49,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-13 07:51:03] 2026-03-13 06:38:49,093 | INFO     | **************************************
[2026-03-13 07:51:03] 2026-03-13 06:38:49,093 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-13 07:51:03] 2026-03-13 06:38:49,093 | INFO     | **************************************
[2026-03-13 07:51:03] 2026-03-13 06:38:49,093 | INFO     | 
[2026-03-13 07:51:03] 2026-03-13 06:38:49,102 | INFO     | architecture information:
[2026-03-13 07:51:03] 2026-03-13 06:38:49,103 | INFO     | executing command: cat /etc/os-release
[2026-03-13 07:51:03] 2026-03-13 06:38:49,123 | INFO     | cat /etc/os-release:
[2026-03-13 07:51:03] NAME="CentOS Linux"
[2026-03-13 07:51:03] VERSION="7 (Core)"
[2026-03-13 07:51:03] ID="centos"
[2026-03-13 07:51:03] ID_LIKE="rhel fedora"
[2026-03-13 07:51:03] VERSION_ID="7"
[2026-03-13 07:51:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-13 07:51:03] ANSI_COLOR="0;31"
[2026-03-13 07:51:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-13 07:51:03] HOME_URL="https://www.centos.org/"
[2026-03-13 07:51:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-13 07:51:03] 
[2026-03-13 07:51:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-13 07:51:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-13 07:51:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-13 07:51:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-13 07:51:03] 
[2026-03-13 07:51:03] 2026-03-13 06:38:49,124 | INFO     | **************************************
[2026-03-13 07:51:03] 2026-03-13 06:38:49,626 | INFO     | executing command: df -mP /var/lib/boinc/var/slot48/slots/0
[2026-03-13 07:51:03] 2026-03-13 06:38:49,655 | INFO     | sufficient remaining disk space (71995228160 B)
[2026-03-13 07:51:03] 2026-03-13 06:38:49,656 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-13 07:51:03] 2026-03-13 06:38:49,656 | INFO     | current server update state: UPDATING_FINAL
[2026-03-13 07:51:03] 2026-03-13 06:38:49,656 | INFO     | update_server=False
[2026-03-13 07:51:03] 2026-03-13 06:38:49,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-13 07:51:03] 2026-03-13 06:38:50,276 | INFO     | all data control threads have been joined
[2026-03-13 07:51:03] 2026-03-13 06:38:50,382 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-13 07:51:03] 2026-03-13 06:38:50,384 | INFO     | aborting loop
[2026-03-13 07:51:03] 2026-03-13 06:38:50,402 | INFO     | all payload control threads have been joined
[2026-03-13 07:51:03] 2026-03-13 06:38:50,662 | INFO     | [job] retrieve thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:50,758 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-13 07:51:03] 2026-03-13 06:38:50,794 | INFO     | [payload] execute_payloads thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:50,866 | INFO     | [job] create_data_payload thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:50,867 | INFO     | [job] validate thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:50,992 | INFO     | [payload] validate_pre thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:51,195 | INFO     | all job control threads have been joined
[2026-03-13 07:51:03] 2026-03-13 06:38:51,281 | INFO     | [data] control thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:51,289 | INFO     | [payload] validate_post thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:51,389 | INFO     | [job] job monitor thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:51,407 | INFO     | [payload] control thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:51,619 | INFO     | [data] copytool_in thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:51,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-13 07:51:03] 2026-03-13 06:38:51,882 | INFO     | [payload] failed_post thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:52,200 | INFO     | [job] control thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:52,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-13 07:51:03] 2026-03-13 06:38:52,764 | INFO     | [data] copytool_out thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:52,792 | INFO     | [job] queue monitor thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:38:56,646 | INFO     | [data] queue_monitor thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:39:00,520 | INFO     | job.realtimelogging is not enabled
[2026-03-13 07:51:03] 2026-03-13 06:39:01,525 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-13 07:51:03] 2026-03-13 06:39:19,502 | INFO     | PID=1970594 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-03-13 07:51:03] 2026-03-13 06:39:19,502 | INFO     | .. there are 21 such processes running
[2026-03-13 07:51:03] 2026-03-13 06:39:19,503 | INFO     | found 0 job(s) in 20 queues
[2026-03-13 07:51:03] 2026-03-13 06:39:19,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-13 07:51:03] 2026-03-13 06:39:19,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-13 07:51:03] 2026-03-13 06:39:35,426 | INFO     | [monitor] cgroup control has ended
[2026-03-13 07:51:03] 2026-03-13 06:39:36,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22471787583296)>', '<ExcThread(monitor, started 22471547037440)>']
[2026-03-13 07:51:03] 2026-03-13 06:39:37,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-13 07:51:03] 2026-03-13 06:39:37,589 | INFO     | [monitor] control thread has ended
[2026-03-13 07:51:03] 2026-03-13 06:39:41,861 | INFO     | all workflow threads have been joined
[2026-03-13 07:51:03] 2026-03-13 06:39:41,861 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-13 07:51:03] 2026-03-13 06:39:41,862 | INFO     | traces error code: 0
[2026-03-13 07:51:03] 2026-03-13 06:39:41,862 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-13 07:51:03] 2026-03-13 06:39:42,010 [wrapper] ==== pilot stdout END ====
[2026-03-13 07:51:03] 2026-03-13 06:39:42,016 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-13 07:51:03] 2026-03-13 06:39:42,021 [wrapper] pilotpid: 1970594
[2026-03-13 07:51:03] 2026-03-13 06:39:42,027 [wrapper] Pilot exit status: 0
[2026-03-13 07:51:03] 2026-03-13 06:39:42,042 [wrapper] pandaids: 7040501583
[2026-03-13 07:51:03] 2026-03-13 06:39:42,257 [wrapper] cleanup supervisor_pilot 2403725 1970595
[2026-03-13 07:51:03] 2026-03-13 06:39:42,261 [wrapper] Test setup, not cleaning
[2026-03-13 07:51:03] 2026-03-13 06:39:42,266 [wrapper] apfmon messages muted
[2026-03-13 07:51:03] 2026-03-13 06:39:42,270 [wrapper] ==== wrapper stdout END ====
[2026-03-13 07:51:03] 2026-03-13 06:39:42,273 [wrapper] ==== wrapper stderr END ====
[2026-03-13 07:51:03]  *** Error codes and diagnostics ***
[2026-03-13 07:51:03]     "exeErrorCode": 0,
[2026-03-13 07:51:03]     "exeErrorDiag": "",
[2026-03-13 07:51:03]     "pilotErrorCode": 0,
[2026-03-13 07:51:03]     "pilotErrorDiag": "",
[2026-03-13 07:51:03]  *** Listing of results directory ***
[2026-03-13 07:51:03] total 478108
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc    584627 Mar  4 19:40 pilot3.tar.gz
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc      5111 Mar  4 20:35 queuedata.json
[2026-03-13 07:51:03] -rwx------. 1 boinc boinc     36322 Mar  4 20:36 runpilot2-wrapper.sh
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc       100 Mar 13 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-13 07:51:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar 13 04:16 run_atlas
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc       105 Mar 13 04:16 job.xml
[2026-03-13 07:51:03] -rw-r--r--. 2 boinc boinc 275481798 Mar 13 04:16 EVNT.48958625._000039.pool.root.1
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc      6621 Mar 13 04:16 init_data.xml
[2026-03-13 07:51:03] -rw-r--r--. 2 boinc boinc     15845 Mar 13 04:16 start_atlas.sh
[2026-03-13 07:51:03] drwxrwx--x. 2 boinc boinc      4096 Mar 13 04:16 shared
[2026-03-13 07:51:03] -rw-r--r--. 2 boinc boinc    597937 Mar 13 04:16 input.tar.gz
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc         0 Mar 13 04:16 boinc_lockfile
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc      2518 Mar 13 04:16 pandaJob.out
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc   1006514 Mar 13 04:17 agis_schedconf.cvmfs.json
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc       443 Mar 13 04:17 workernode_map.json
[2026-03-13 07:51:03] drwx------. 5 boinc boinc      4096 Mar 13 04:17 pilot3
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc 206100319 Mar 13 07:38 HITS.48958627._000967.pool.root.1
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc       528 Mar 13 07:38 boinc_task_state.xml
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc      1031 Mar 13 07:38 memory_monitor_summary.json
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc   1511578 Mar 13 07:38 agis_ddmendpoints.agis.ALL.json
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc    374328 Mar 13 07:38 log.48958627._000967.job.log.tgz.1
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc      6356 Mar 13 07:38 heartbeat.json
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc        95 Mar 13 07:39 pilot_heartbeat.json
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc      4902 Mar 13 07:39 pilotlog.txt
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc   1655186 Mar 13 07:39 log.48958627._000967.job.log.1
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc       357 Mar 13 07:39 output.list
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc       620 Mar 13 07:39 runtime_log
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc   2048000 Mar 13 07:39 result.tar.gz
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc      9205 Mar 13 07:39 runtime_log.err
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc       666 Mar 13 07:39 ZdPKDmLC7H9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLXLLDmd8ysMm.diag
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc        26 Mar 13 07:50 wrapper_checkpoint.txt
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc      8192 Mar 13 07:51 boinc_mmap_file
[2026-03-13 07:51:03] -rw-r--r--. 1 boinc boinc     21097 Mar 13 07:51 stderr.txt
[2026-03-13 07:51:03] HITS file was successfully produced:
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc 206100319 Mar 13 07:38 shared/HITS.pool.root.1
[2026-03-13 07:51:03]  *** Contents of shared directory: ***
[2026-03-13 07:51:03] total 472908
[2026-03-13 07:51:03] -rw-r--r--. 2 boinc boinc 275481798 Mar 13 04:16 ATLAS.root_0
[2026-03-13 07:51:03] -rw-r--r--. 2 boinc boinc     15845 Mar 13 04:16 start_atlas.sh
[2026-03-13 07:51:03] -rw-r--r--. 2 boinc boinc    597937 Mar 13 04:16 input.tar.gz
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc 206100319 Mar 13 07:38 HITS.pool.root.1
[2026-03-13 07:51:03] -rw-------. 1 boinc boinc   2048000 Mar 13 07:39 result.tar.gz
07:51:04 (1962484): run_atlas exited; CPU time 46289.438227
07:51:04 (1962484): called boinc_finish(0)

</stderr_txt>
]]>

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