Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:17:33 (2717218): wrapper (7.7.26015): starting
02:17:33 (2717218): wrapper: running run_atlas (--nthreads 12)
[2026-03-08 02:17:33] Arguments: --nthreads 12
[2026-03-08 02:17:33] Threads: 12
[2026-03-08 02:17:33] Checking for CVMFS
[2026-03-08 02:17:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-08 02:17:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-08 02:17:35] Running cvmfs_config stat atlas.cern.ch
[2026-03-08 02:17:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-08 02:17:36] 2.13.3.0 2676515 79 47320 157009 0 49 2235513 4096001 0 130560 0 119337 99.985 5564 404 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-03-08 02:17:36] CVMFS is ok
[2026-03-08 02:17:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-08 02:17:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-03-08 02:17:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-03-08 02:17:36] Further information can be found at the LHC@home message board.
[2026-03-08 02:17:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-08 02:17:36] Checking for apptainer binary...
[2026-03-08 02:17:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-08 02:17:36] Running /usr/bin/apptainer --version
[2026-03-08 02:17:36] apptainer version 1.4.5
[2026-03-08 02:17:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-08 02:17:36] zero3-MS-7D76
[2026-03-08 02:17:36] apptainer works
[2026-03-08 02:17:36] Set ATHENA_PROC_NUMBER=12
[2026-03-08 02:17:36] Set ATHENA_CORE_NUMBER=12
[2026-03-08 02:17:36] Starting ATLAS job with PandaID=7043425497
[2026-03-08 02:17:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-08 02:42:09]  *** The last 200 lines of the pilot log: ***
[2026-03-08 02:42:09]  is_altstaged=None
[2026-03-08 02:42:09]  is_tar=False
[2026-03-08 02:42:09]  lfn=log.48958627._003879.job.log.tgz.1
[2026-03-08 02:42:09]  mtime=0
[2026-03-08 02:42:09]  protocol_id=None
[2026-03-08 02:42:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-03-08 02:42:09]  replicas=None
[2026-03-08 02:42:09]  scope=mc23_13p6TeV
[2026-03-08 02:42:09]  status=None
[2026-03-08 02:42:09]  status_code=0
[2026-03-08 02:42:09]  storage_token=
[2026-03-08 02:42:09]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-7043425497/log.48958627._003879.job.log.tgz.1
[2026-03-08 02:42:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/d5/log.48958627._003879.job.log.tgz.1
[2026-03-08 02:42:09]  workdir=None
[2026-03-08 02:42:09] ]
[2026-03-08 02:42:09] 2026-03-07 17:41:34,890 | INFO     | transferring file log.48958627._003879.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-7043425497/log.48958627._003879.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-03-08 02:42:09] 2026-03-07 17:41:34,890 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-7043425497/log.48958627._003879.job.log.tgz.1 /var/lib/boinc/slots/5/log.48958627._003879.job
[2026-03-08 02:42:09] 2026-03-07 17:41:34,895 | INFO     | adding to output.list: log.48958627._003879.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c0/d5/log.48958627._003879.job.log.tg
[2026-03-08 02:42:09] 2026-03-07 17:41:34,896 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-03-08 02:42:09] 2026-03-07 17:41:34,896 | INFO     | summary of transferred files:
[2026-03-08 02:42:09] 2026-03-07 17:41:34,896 | INFO     |  -- lfn=log.48958627._003879.job.log.tgz.1, status_code=0, status=transferred
[2026-03-08 02:42:09] 2026-03-07 17:41:34,896 | INFO     | stage-out finished correctly
[2026-03-08 02:42:09] 2026-03-07 17:41:34,915 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-03-08 02:42:09] 2026-03-07 17:41:35,067 | WARNING  | process 2725880 can no longer be monitored (due to stat problems) - aborting
[2026-03-08 02:42:09] 2026-03-07 17:41:35,067 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7043425497/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 02:42:09] 2026-03-07 17:41:35,084 | INFO     | number of running child processes to parent process 2725880: 1
[2026-03-08 02:42:09] 2026-03-07 17:41:35,085 | INFO     | maximum number of monitored processes: 6
[2026-03-08 02:42:09] 2026-03-07 17:41:36,271 | INFO     | time since job start (1427s) is within the limit (349056.0s)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,587 | INFO     | monitor loop #113: job 0:7043425497 is in state 'finished'
[2026-03-08 02:42:09] 2026-03-07 17:41:37,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,837 | INFO     | job 7043425497 has state=finished
[2026-03-08 02:42:09] 2026-03-07 17:41:37,837 | INFO     | preparing for final server update for job 7043425497 in state='finished'
[2026-03-08 02:42:09] 2026-03-07 17:41:37,837 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-7043425497/jobReport.json
[2026-03-08 02:42:09] 2026-03-07 17:41:37,838 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-03-08 02:42:09] 2026-03-07 17:41:37,838 | INFO     | this job has now completed (state=finished)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,838 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,838 | INFO     | log transfer has been attempted: DONE
[2026-03-08 02:42:09] 2026-03-07 17:41:37,838 | INFO     | job 7043425497 has finished - writing final server update
[2026-03-08 02:42:09] 2026-03-07 17:41:37,838 | INFO     | total number of processed events: 400 (read)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,839 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7043425497/memory_monitor_summary.json (trf name=prmon)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,839 | INFO     | extracted standard info from prmon json
[2026-03-08 02:42:09] 2026-03-07 17:41:37,839 | INFO     | extracted standard memory fields from prmon json
[2026-03-08 02:42:09] 2026-03-07 17:41:37,839 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-03-08 02:42:09] 2026-03-07 17:41:37,839 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-08 02:42:09] 2026-03-07 17:41:37,839 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | fitting pss+swap vs Time
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | sum of square deviations: 1518168.0
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | sum of deviations: 97896703.99999999
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | mean x: 1772904676.0
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | mean y: 3177673.9411764704
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | intersect: -114319824975.69173
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | chi2: 4.9719001184273575e-05
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | current memory leak: 64.48 B/s (using 17 data points, chi2=0.00)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | could have reported an average CPU frequency of 4798 MHz (4 samples)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | ..............................
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . Timing measurements:
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . get job = 0 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . initial setup = 5 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . payload setup = 1 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . stage-in = 0 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . payload execution = 1408 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . stage-out = 0 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | . log creation = 0 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,840 | INFO     | ..............................
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | 
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | job summary report
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | --------------------------------------------------
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | PanDA job id: 7043425497
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | task id: 48958627
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | errors: (none)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | pilot state: finished 
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | transexitcode: 0
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | exeerrorcode: 0
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | exeerrordiag: 
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | exitcode: 0
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | exitmsg: OK
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | cpuconsumptiontime: 14111 s
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | nevents: 400
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | neventsw: 0
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | pid: 2725880
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | pgrp: 2725880
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | corecount: 12
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | event service: False
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | sizes: {0: 2295701, 10: 2295701, 1413: 2320490, 1415: 2329544, 1418: 2329682}
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | --------------------------------------------------
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | 
[2026-03-08 02:42:09] 2026-03-07 17:41:37,862 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | job 7043425497 has completed (purged errors)
[2026-03-08 02:42:09] 2026-03-07 17:41:37,869 | INFO     | overall cleanup function is called
[2026-03-08 02:42:09] 2026-03-07 17:41:38,875 | INFO     | --- collectZombieJob: --- 10, [2725880]
[2026-03-08 02:42:09] 2026-03-07 17:41:38,875 | INFO     | zombie collector waiting for pid 2725880
[2026-03-08 02:42:09] 2026-03-07 17:41:38,875 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-08 02:42:09] 2026-03-07 17:41:38,875 | INFO     | collected zombie processes
[2026-03-08 02:42:09] 2026-03-07 17:41:38,875 | INFO     | will attempt to kill all subprocesses of pid=2725880
[2026-03-08 02:42:09] 2026-03-07 17:41:38,894 | INFO     | process IDs to be killed: [2725880] (in reverse order)
[2026-03-08 02:42:09] 2026-03-07 17:41:38,906 | WARNING  | found no corresponding commands to process id(s)
[2026-03-08 02:42:09] 2026-03-07 17:41:38,906 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-08 02:42:09] 2026-03-07 17:41:38,907 | INFO     | did not find any defunct processes belonging to 2725880
[2026-03-08 02:42:09] 2026-03-07 17:41:38,907 | INFO     | did not find any defunct processes belonging to 2725880
[2026-03-08 02:42:09] 2026-03-07 17:41:38,907 | INFO     | ready for new job
[2026-03-08 02:42:09] 2026-03-07 17:41:38,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-08 02:42:09] 2026-03-07 17:41:38,908 | INFO     | **************************************
[2026-03-08 02:42:09] 2026-03-07 17:41:38,908 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-08 02:42:09] 2026-03-07 17:41:38,908 | INFO     | **************************************
[2026-03-08 02:42:09] 2026-03-07 17:41:38,908 | INFO     | 
[2026-03-08 02:42:09] 2026-03-07 17:41:38,908 | INFO     | architecture information:
[2026-03-08 02:42:09] 2026-03-07 17:41:38,908 | INFO     | executing command: cat /etc/os-release
[2026-03-08 02:42:09] 2026-03-07 17:41:38,912 | INFO     | cat /etc/os-release:
[2026-03-08 02:42:09] NAME="CentOS Linux"
[2026-03-08 02:42:09] VERSION="7 (Core)"
[2026-03-08 02:42:09] ID="centos"
[2026-03-08 02:42:09] ID_LIKE="rhel fedora"
[2026-03-08 02:42:09] VERSION_ID="7"
[2026-03-08 02:42:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-08 02:42:09] ANSI_COLOR="0;31"
[2026-03-08 02:42:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-08 02:42:09] HOME_URL="https://www.centos.org/"
[2026-03-08 02:42:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-08 02:42:09] 
[2026-03-08 02:42:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-08 02:42:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-08 02:42:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-08 02:42:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-08 02:42:09] 
[2026-03-08 02:42:09] 2026-03-07 17:41:38,912 | INFO     | **************************************
[2026-03-08 02:42:09] 2026-03-07 17:41:39,414 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | INFO     | sufficient remaining disk space (829657448448 B)
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | INFO     | current server update state: UPDATING_FINAL
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | INFO     | update_server=False
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-08 02:42:09] 2026-03-07 17:41:39,420 | INFO     | aborting loop
[2026-03-08 02:42:09] 2026-03-07 17:41:40,202 | INFO     | all data control threads have been joined
[2026-03-08 02:42:09] 2026-03-07 17:41:40,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-08 02:42:09] 2026-03-07 17:41:40,425 | INFO     | [job] queue monitor thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:40,425 | INFO     | [job] retrieve thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:40,426 | INFO     | [job] job monitor thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:40,725 | INFO     | all payload control threads have been joined
[2026-03-08 02:42:09] 2026-03-07 17:41:40,729 | INFO     | [payload] validate_post thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:40,837 | INFO     | all job control threads have been joined
[2026-03-08 02:42:09] 2026-03-07 17:41:40,937 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-08 02:42:09] 2026-03-07 17:41:41,048 | INFO     | [job] validate thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,110 | INFO     | [job] create_data_payload thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,178 | INFO     | [payload] validate_pre thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,207 | INFO     | [data] control thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,224 | INFO     | [data] copytool_in thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,522 | INFO     | [payload] execute_payloads thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,729 | INFO     | [payload] control thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,795 | INFO     | [payload] failed_post thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:41,842 | INFO     | [job] control thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:42,428 | INFO     | [data] copytool_out thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:44,943 | INFO     | [data] queue_monitor thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:50,393 | INFO     | job.realtimelogging is not enabled
[2026-03-08 02:42:09] 2026-03-07 17:41:51,398 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-08 02:42:09] 2026-03-07 17:41:51,668 | INFO     | [monitor] cgroup control has ended
[2026-03-08 02:42:09] 2026-03-07 17:41:52,599 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131290834655040)>', '<ExcThread(monitor, started 131290338670336)>']
[2026-03-08 02:42:09] 2026-03-07 17:41:57,624 | INFO     | all workflow threads have been joined
[2026-03-08 02:42:09] 2026-03-07 17:41:57,624 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-08 02:42:09] 2026-03-07 17:41:57,624 | INFO     | traces error code: 0
[2026-03-08 02:42:09] 2026-03-07 17:41:57,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-08 02:42:09] 2026-03-07 17:42:09,349 | INFO     | PID=2721363 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-03-08 02:42:09] 2026-03-07 17:42:09,350 | INFO     | found 0 job(s) in 20 queues
[2026-03-08 02:42:09] 2026-03-07 17:42:09,350 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-08 02:42:09] 2026-03-07 17:42:09,350 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-08 02:42:09] 2026-03-07 17:42:09,350 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-08 02:42:09] 2026-03-07 17:42:09,350 | CRITICAL | thread 'MainThread' is not alive
[2026-03-08 02:42:09] 2026-03-07 17:42:09,350 | INFO     | [monitor] control thread has ended
[2026-03-08 02:42:09] 2026-03-07 17:42:09,382 [wrapper] ==== pilot stdout END ====
[2026-03-08 02:42:09] 2026-03-07 17:42:09,383 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-08 02:42:09] 2026-03-07 17:42:09,383 [wrapper] pilotpid: 2721363
[2026-03-08 02:42:09] 2026-03-07 17:42:09,384 [wrapper] Pilot exit status: 0
[2026-03-08 02:42:09] 2026-03-07 17:42:09,386 [wrapper] pandaids: 7043425497
[2026-03-08 02:42:09] 2026-03-07 17:42:09,393 [wrapper] cleanup supervisor_pilot 2730588 2721364
[2026-03-08 02:42:09] 2026-03-07 17:42:09,393 [wrapper] Test setup, not cleaning
[2026-03-08 02:42:09] 2026-03-07 17:42:09,394 [wrapper] apfmon messages muted
[2026-03-08 02:42:09] 2026-03-07 17:42:09,394 [wrapper] ==== wrapper stdout END ====
[2026-03-08 02:42:09] 2026-03-07 17:42:09,395 [wrapper] ==== wrapper stderr END ====
[2026-03-08 02:42:09]  *** Error codes and diagnostics ***
[2026-03-08 02:42:09]     "exeErrorCode": 0,
[2026-03-08 02:42:09]     "exeErrorDiag": "",
[2026-03-08 02:42:09]     "pilotErrorCode": 0,
[2026-03-08 02:42:09]     "pilotErrorDiag": "",
[2026-03-08 02:42:09]  *** Listing of results directory ***
[2026-03-08 02:42:09] total 471136
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc    584627 Mar  7 02:41 pilot3.tar.gz
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc      5111 Mar  7 03:11 queuedata.json
[2026-03-08 02:42:09] -rwx------ 1 boinc boinc     36322 Mar  7 03:12 runpilot2-wrapper.sh
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc       100 Mar  8 02:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-08 02:42:09] -rwxr-xr-x 1 boinc boinc      7986 Mar  8 02:17 run_atlas
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc       105 Mar  8 02:17 job.xml
[2026-03-08 02:42:09] -rw-r--r-- 2 boinc boinc 275510369 Mar  8 02:17 EVNT.48958625._000143.pool.root.1
[2026-03-08 02:42:09] -rw-r--r-- 2 boinc boinc    597951 Mar  8 02:17 input.tar.gz
[2026-03-08 02:42:09] -rw-r--r-- 2 boinc boinc     15845 Mar  8 02:17 start_atlas.sh
[2026-03-08 02:42:09] drwxrwx--x 1 boinc boinc        76 Mar  8 02:17 shared
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc         0 Mar  8 02:17 boinc_setup_complete
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc      9446 Mar  8 02:17 init_data.xml
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc         0 Mar  8 02:17 boinc_lockfile
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc      2521 Mar  8 02:17 pandaJob.out
[2026-03-08 02:42:09] -rw------- 1 boinc boinc    999177 Mar  8 02:17 agis_schedconf.cvmfs.json
[2026-03-08 02:42:09] -rw------- 1 boinc boinc   1521291 Mar  8 02:17 agis_ddmendpoints.agis.ALL.json
[2026-03-08 02:42:09] -rw------- 1 boinc boinc       428 Mar  8 02:17 workernode_map.json
[2026-03-08 02:42:09] drwx------ 1 boinc boinc       414 Mar  8 02:17 pilot3
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc       529 Mar  8 02:41 boinc_task_state.xml
[2026-03-08 02:42:09] -rw------- 1 boinc boinc 201865475 Mar  8 02:41 HITS.48958627._003879.pool.root.1
[2026-03-08 02:42:09] -rw------- 1 boinc boinc      1012 Mar  8 02:41 memory_monitor_summary.json
[2026-03-08 02:42:09] -rw------- 1 boinc boinc    331182 Mar  8 02:41 log.48958627._003879.job.log.tgz.1
[2026-03-08 02:42:09] -rw------- 1 boinc boinc      6291 Mar  8 02:41 heartbeat.json
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc        27 Mar  8 02:41 wrapper_checkpoint.txt
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc      8192 Mar  8 02:41 boinc_mmap_file
[2026-03-08 02:42:09] -rw------- 1 boinc boinc       817 Mar  8 02:42 pilotlog.txt
[2026-03-08 02:42:09] -rw------- 1 boinc boinc        95 Mar  8 02:42 pilot_heartbeat.json
[2026-03-08 02:42:09] -rw------- 1 boinc boinc    244970 Mar  8 02:42 log.48958627._003879.job.log.1
[2026-03-08 02:42:09] -rw------- 1 boinc boinc       357 Mar  8 02:42 output.list
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc       620 Mar  8 02:42 runtime_log
[2026-03-08 02:42:09] -rw------- 1 boinc boinc    593920 Mar  8 02:42 result.tar.gz
[2026-03-08 02:42:09] -rw------- 1 boinc boinc       650 Mar  8 02:42 tcDMDmmpoI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKFTLDmDjwwEm.diag
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc      8814 Mar  8 02:42 runtime_log.err
[2026-03-08 02:42:09] -rw-r--r-- 1 boinc boinc     21527 Mar  8 02:42 stderr.txt
[2026-03-08 02:42:09] HITS file was successfully produced:
[2026-03-08 02:42:09] -rw------- 1 boinc boinc 201865475 Mar  8 02:41 shared/HITS.pool.root.1
[2026-03-08 02:42:09]  *** Contents of shared directory: ***
[2026-03-08 02:42:09] total 467372
[2026-03-08 02:42:09] -rw-r--r-- 2 boinc boinc 275510369 Mar  8 02:17 ATLAS.root_0
[2026-03-08 02:42:09] -rw-r--r-- 2 boinc boinc    597951 Mar  8 02:17 input.tar.gz
[2026-03-08 02:42:09] -rw-r--r-- 2 boinc boinc     15845 Mar  8 02:17 start_atlas.sh
[2026-03-08 02:42:09] -rw------- 1 boinc boinc 201865475 Mar  8 02:41 HITS.pool.root.1
[2026-03-08 02:42:09] -rw------- 1 boinc boinc    593920 Mar  8 02:42 result.tar.gz
02:42:10 (2717218): run_atlas exited; CPU time 14112.277658
02:42:10 (2717218): called boinc_finish(0)

</stderr_txt>
]]>

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