Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:23:20 (544581): wrapper (7.7.26015): starting
13:23:20 (544581): wrapper: running run_atlas (--nthreads 12)
[2026-03-06 13:23:20] Arguments: --nthreads 12
[2026-03-06 13:23:20] Threads: 12
[2026-03-06 13:23:20] Checking for CVMFS
[2026-03-06 13:23:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-03-06 13:23:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-03-06 13:23:21] Running cvmfs_config stat atlas.cern.ch
[2026-03-06 13:23:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-03-06 13:23:21] 2.11.5.0 2451234 172621 221848 156972 1 196 37781568 45568000 19132 130560 0 1579932653 99.815 877351982 22005 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-03-06 13:23:21] CVMFS is ok
[2026-03-06 13:23:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-03-06 13:23:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-03-06 13:23:21] Further information can be found at the LHC@home message board.
[2026-03-06 13:23:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-03-06 13:23:21] Checking for apptainer binary...
[2026-03-06 13:23:21] Using apptainer found in PATH at /usr/bin/apptainer
[2026-03-06 13:23:21] Running /usr/bin/apptainer --version
[2026-03-06 13:23:21] apptainer version 1.4.1-1.el9
[2026-03-06 13:23:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-03-06 13:23:22] wns0065.triumf.lcg
[2026-03-06 13:23:22] apptainer works
[2026-03-06 13:23:22] Set ATHENA_PROC_NUMBER=12
[2026-03-06 13:23:22] Set ATHENA_CORE_NUMBER=12
[2026-03-06 13:23:23] Starting ATLAS job with PandaID=7043405335
[2026-03-06 13:23:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-03-06 13:28:03]  *** The last 200 lines of the pilot log: ***
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | WARNING  | wrong length of table data, x=[1772832273.0], y=[1767.0] (must be same and length>=4)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | could have reported an average CPU frequency of 2649 MHz (4 samples)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | ..............................
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . Timing measurements:
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . get job = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . initial setup = 17 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . payload setup = 20 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . stage-in = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . payload execution = 39 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . stage-out = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | . log creation = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | ..............................
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043405335/pilotlog.txt
[2026-03-06 13:28:03] 2026-03-06 21:27:04,541 | INFO     | monitor loop #60: job 0:7043405335 is in state 'failed'
[2026-03-06 13:28:03] 2026-03-06 21:27:04,541 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,657 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-03-06 13:28:03] - Log from pilotlog.txt -
[2026-03-06 13:28:03] 2026-03-06 21:27:04,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 13:28:03] 2026-03-06 21:27:04,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | WARNING  | found no stored workdir sizes
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | WARNING  | wrong length of table data, x=[1772832273.0], y=[1767.0] (must be same and length>=4)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | could have reported an average CPU frequency of 2649 MHz (4 samples)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | ..............................
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . Timing measurements:
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . get job = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . initial setup = 17 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . payload setup = 20 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . stage-in = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . payload execution = 39 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . stage-out = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | . log creation = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | ..............................
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043405335/pilotlog.txt
[2026-03-06 13:28:03] 2026-03-06 21:27:04,541 | INFO     | monitor loop #60: job 0:7043405335 is in state 'failed'
[2026-03-06 13:28:03] 2026-03-06 21:27:04,541 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,657 | WARNING  | 
[2026-03-06 13:28:03] [begin log extracts]
[2026-03-06 13:28:03] - Log from pilotlog.txt -
[2026-03-06 13:28:03] 2026-03-06 21:27:04,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-03-06 13:28:03] 2026-03-06 21:27:04,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | WARNING  | found no stored workdir sizes
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | will not add max space = 0 B to job metrics
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | WARNING  | wrong length of table data, x=[1772832273.0], y=[1767.0] (must be same and length>=4)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | could have reported an average CPU frequency of 2649 MHz (4 samples)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | ..............................
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . Timing measurements:
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . get job = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . initial setup = 17 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . payload setup = 20 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . stage-in = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . payload execution = 39 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,467 | INFO     | . stage-out = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | . log creation = 0 s
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | ..............................
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-03-06 13:28:03] 2026-03-06 21:27:04,468 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7043405335/pilotlog.txt
[2026-03-06 13:28:03] 2026-03-06 21:27:04,541 | INFO     | monitor loop #60: job 0:7043405335 is in state 'failed'
[2026-03-06 13:28:03] 2026-03-06 21:27:04,541 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-03-06 13:28:03] [end log extracts]
[2026-03-06 13:28:03] 2026-03-06 21:27:04,657 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-03-06 13:28:03] 2026-03-06 21:27:04,658 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | 
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | job summary report
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | --------------------------------------------------
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | PanDA job id: 7043405335
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | task id: 48996069
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-03-06 13:24:53,785 CRITICAL Transform executor raised TransformValidationExceptio
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | status: LOG_TRANSFER = DONE 
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | pilot state: failed 
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | transexitcode: 65
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | exeerrorcode: 65
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | exitcode: 65
[2026-03-06 13:28:03] 2026-03-06 21:27:05,236 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | cpuconsumptiontime: 13 s
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | nevents: 0
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | neventsw: 0
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | pid: 552847
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | pgrp: 552847
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | corecount: 12
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | event service: False
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | sizes: {0: 2295285, 1: 2295746, 64: 2318906, 66: 2323198, 69: 2323226, 187: 2323392}
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | --------------------------------------------------
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | 
[2026-03-06 13:28:03] 2026-03-06 21:27:05,237 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue jobs had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue payloads had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue data_in had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue data_out had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue completed_jobids has 1 job(s)
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | queue messages had 0 job(s) [purged]
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | job 7043405335 has completed (purged errors)
[2026-03-06 13:28:03] 2026-03-06 21:27:05,254 | INFO     | overall cleanup function is called
[2026-03-06 13:28:03] 2026-03-06 21:27:06,261 | INFO     | --- collectZombieJob: --- 10, [552847]
[2026-03-06 13:28:03] 2026-03-06 21:27:06,262 | INFO     | zombie collector waiting for pid 552847
[2026-03-06 13:28:03] 2026-03-06 21:27:06,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-03-06 13:28:03] 2026-03-06 21:27:06,262 | INFO     | collected zombie processes
[2026-03-06 13:28:03] 2026-03-06 21:27:06,262 | INFO     | will attempt to kill all subprocesses of pid=552847
[2026-03-06 13:28:03] 2026-03-06 21:27:06,784 | INFO     | process IDs to be killed: [552847] (in reverse order)
[2026-03-06 13:28:03] 2026-03-06 21:27:06,930 | WARNING  | found no corresponding commands to process id(s)
[2026-03-06 13:28:03] 2026-03-06 21:27:06,930 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-03-06 13:28:03] 2026-03-06 21:27:06,937 | INFO     | did not find any defunct processes belonging to 552847
[2026-03-06 13:28:03] 2026-03-06 21:27:06,943 | INFO     | did not find any defunct processes belonging to 552847
[2026-03-06 13:28:03] 2026-03-06 21:27:06,943 | INFO     | ready for new job
[2026-03-06 13:28:03] 2026-03-06 21:27:06,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-03-06 13:28:03] 2026-03-06 21:27:06,945 | INFO     | **************************************
[2026-03-06 13:28:03] 2026-03-06 21:27:06,946 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-03-06 13:28:03] 2026-03-06 21:27:06,946 | INFO     | **************************************
[2026-03-06 13:28:03] 2026-03-06 21:27:06,946 | INFO     | 
[2026-03-06 13:28:03] 2026-03-06 21:27:06,948 | INFO     | architecture information:
[2026-03-06 13:28:03] 2026-03-06 21:27:06,948 | INFO     | executing command: cat /etc/os-release
[2026-03-06 13:28:03] 2026-03-06 21:27:06,960 | INFO     | cat /etc/os-release:
[2026-03-06 13:28:03] NAME="CentOS Linux"
[2026-03-06 13:28:03] VERSION="7 (Core)"
[2026-03-06 13:28:03] ID="centos"
[2026-03-06 13:28:03] ID_LIKE="rhel fedora"
[2026-03-06 13:28:03] VERSION_ID="7"
[2026-03-06 13:28:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-03-06 13:28:03] ANSI_COLOR="0;31"
[2026-03-06 13:28:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-03-06 13:28:03] HOME_URL="https://www.centos.org/"
[2026-03-06 13:28:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-03-06 13:28:03] 
[2026-03-06 13:28:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-03-06 13:28:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-03-06 13:28:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-03-06 13:28:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-03-06 13:28:03] 
[2026-03-06 13:28:03] 2026-03-06 21:27:06,960 | INFO     | **************************************
[2026-03-06 13:28:03] 2026-03-06 21:27:07,464 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-03-06 13:28:03] 2026-03-06 21:27:07,557 | INFO     | sufficient remaining disk space (2188281643008 B)
[2026-03-06 13:28:03] 2026-03-06 21:27:07,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-03-06 13:28:03] 2026-03-06 21:27:07,557 | INFO     | current server update state: UPDATING_FINAL
[2026-03-06 13:28:03] 2026-03-06 21:27:07,557 | INFO     | update_server=False
[2026-03-06 13:28:03] 2026-03-06 21:27:07,558 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-03-06 13:28:03] 2026-03-06 21:27:07,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-03-06 13:28:03] 2026-03-06 21:27:07,765 | INFO     | all job control threads have been joined
[2026-03-06 13:28:03] 2026-03-06 21:27:07,817 | INFO     | all data control threads have been joined
[2026-03-06 13:28:03] 2026-03-06 21:27:08,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-03-06 13:28:03] 2026-03-06 21:27:08,052 | INFO     | aborting loop
[2026-03-06 13:28:03] 2026-03-06 21:27:08,564 | INFO     | [job] retrieve thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:08,587 | INFO     | all payload control threads have been joined
[2026-03-06 13:28:03] 2026-03-06 21:27:08,644 | INFO     | [payload] run_realtimelog thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:08,653 | INFO     | [job] create_data_payload thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:08,753 | INFO     | [payload] failed_post thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:08,772 | INFO     | [job] control thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:08,774 | INFO     | [data] copytool_in thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:08,778 | INFO     | [payload] validate_post thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:08,823 | INFO     | [data] control thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:09,058 | INFO     | [job] job monitor thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:09,287 | INFO     | [payload] validate_pre thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:09,578 | INFO     | [data] copytool_out thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:09,592 | INFO     | [payload] control thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:09,748 | INFO     | [job] validate thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:09,811 | INFO     | [payload] execute_payloads thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:10,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-03-06 13:28:03] 2026-03-06 21:27:10,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-03-06 13:28:03] 2026-03-06 21:27:11,084 | INFO     | [job] queue monitor thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:14,140 | INFO     | [data] queue_monitor thread has finished
[2026-03-06 13:28:03] 2026-03-06 21:27:37,856 | INFO     | PID=548260 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-03-06 13:28:03] 2026-03-06 21:27:37,856 | INFO     | .. there are 28 such processes running
[2026-03-06 13:28:03] 2026-03-06 21:27:37,857 | INFO     | found 0 job(s) in 20 queues
[2026-03-06 13:28:03] 2026-03-06 21:27:37,857 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-03-06 13:28:03] 2026-03-06 21:27:37,857 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-03-06 13:28:03] 2026-03-06 21:27:56,410 | INFO     | [monitor] cgroup control has ended
[2026-03-06 13:28:03] 2026-03-06 21:27:58,166 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140519157200704)>', '<ExcThread(monitor, started 140518621169408)>']
[2026-03-06 13:28:03] 2026-03-06 21:27:58,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-03-06 13:28:03] 2026-03-06 21:27:58,991 | INFO     | [monitor] control thread has ended
[2026-03-06 13:28:03] 2026-03-06 21:28:03,192 | INFO     | all workflow threads have been joined
[2026-03-06 13:28:03] 2026-03-06 21:28:03,193 | INFO     | end of generic workflow (traces error code: 0)
[2026-03-06 13:28:03] 2026-03-06 21:28:03,193 | INFO     | traces error code: 0
[2026-03-06 13:28:03] 2026-03-06 21:28:03,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-03-06 13:28:03] 2026-03-06 21:28:03,324 [wrapper] ==== pilot stdout END ====
[2026-03-06 13:28:03] 2026-03-06 21:28:03,325 [wrapper] ==== wrapper stdout RESUME ====
[2026-03-06 13:28:03] 2026-03-06 21:28:03,327 [wrapper] pilotpid: 548260
[2026-03-06 13:28:03] 2026-03-06 21:28:03,329 [wrapper] Pilot exit status: 0
[2026-03-06 13:28:03] 2026-03-06 21:28:03,400 [wrapper] pandaids: 7043405335
[2026-03-06 13:28:03] 2026-03-06 21:28:03,466 [wrapper] cleanup supervisor_pilot  548266 548261
[2026-03-06 13:28:03] 2026-03-06 21:28:03,468 [wrapper] Test setup, not cleaning
[2026-03-06 13:28:03] 2026-03-06 21:28:03,470 [wrapper] apfmon messages muted
[2026-03-06 13:28:03] 2026-03-06 21:28:03,472 [wrapper] ==== wrapper stdout END ====
[2026-03-06 13:28:03] 2026-03-06 21:28:03,473 [wrapper] ==== wrapper stderr END ====
[2026-03-06 13:28:03]  *** Error codes and diagnostics ***
[2026-03-06 13:28:03]     "exeErrorCode": 65,
[2026-03-06 13:28:03]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 13:28:03]     "pilotErrorCode": 1305,
[2026-03-06 13:28:03]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-03-06 13:28:03]  *** Listing of results directory ***
[2026-03-06 13:28:03] total 524640
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc    584627 Mar  6 09:41 pilot3.tar.gz
[2026-03-06 13:28:03] -rwx------. 1 boinc boinc     36322 Mar  6 09:43 runpilot2-wrapper.sh
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc      5111 Mar  6 09:43 queuedata.json
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc       100 Mar  6 13:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-03-06 13:28:03] -rwxr-xr-x. 1 boinc boinc      7986 Mar  6 13:23 run_atlas
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc       105 Mar  6 13:23 job.xml
[2026-03-06 13:28:03] -rw-r--r--. 2 boinc boinc 533083939 Mar  6 13:23 EVNT.48329618._000023.pool.root.1
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc      6594 Mar  6 13:23 init_data.xml
[2026-03-06 13:28:03] -rw-r--r--. 2 boinc boinc     15845 Mar  6 13:23 start_atlas.sh
[2026-03-06 13:28:03] drwxrwx--x. 2 boinc boinc      4096 Mar  6 13:23 shared
[2026-03-06 13:28:03] -rw-r--r--. 2 boinc boinc    597942 Mar  6 13:23 input.tar.gz
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc         0 Mar  6 13:23 boinc_lockfile
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc      2500 Mar  6 13:23 pandaJob.out
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc    999504 Mar  6 13:23 agis_schedconf.cvmfs.json
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc   1521291 Mar  6 13:23 agis_ddmendpoints.agis.ALL.json
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc       444 Mar  6 13:23 workernode_map.json
[2026-03-06 13:28:03] drwx------. 5 boinc boinc      4096 Mar  6 13:23 pilot3
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc       523 Mar  6 13:24 boinc_task_state.xml
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc       959 Mar  6 13:24 memory_monitor_summary.json
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc     20815 Mar  6 13:25 log.48996069._001109.job.log.tgz.1
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc        95 Mar  6 13:26 pilot_heartbeat.json
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc      7006 Mar  6 13:27 heartbeat.json
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc      8192 Mar  6 13:28 boinc_mmap_file
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc        22 Mar  6 13:28 wrapper_checkpoint.txt
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc      4818 Mar  6 13:28 pilotlog.txt
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc     83839 Mar  6 13:28 log.48996069._001109.job.log.1
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc       188 Mar  6 13:28 output.list
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc       620 Mar  6 13:28 runtime_log
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc    122880 Mar  6 13:28 result.tar.gz
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc      8635 Mar  6 13:28 runtime_log.err
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc       643 Mar  6 13:28 LsOODmjNoI9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZATLDm85QGBo.diag
[2026-03-06 13:28:03] -rw-r--r--. 1 boinc boinc     21768 Mar  6 13:28 stderr.txt
[2026-03-06 13:28:03] No HITS result produced
[2026-03-06 13:28:03]  *** Contents of shared directory: ***
[2026-03-06 13:28:03] total 521316
[2026-03-06 13:28:03] -rw-r--r--. 2 boinc boinc 533083939 Mar  6 13:23 ATLAS.root_0
[2026-03-06 13:28:03] -rw-r--r--. 2 boinc boinc     15845 Mar  6 13:23 start_atlas.sh
[2026-03-06 13:28:03] -rw-r--r--. 2 boinc boinc    597942 Mar  6 13:23 input.tar.gz
[2026-03-06 13:28:03] -rw-------. 1 boinc boinc    122880 Mar  6 13:28 result.tar.gz
13:28:05 (544581): run_atlas exited; CPU time 19.280423
13:28:05 (544581): called boinc_finish(0)

</stderr_txt>
]]>

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